Guide to the Human Genome
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Name: STAC3 Sequence: fasta or formatted (364aa) NCBI GI: 21450838
Description:

SH3 and cysteine rich domain 3

Referenced in:

Non-Receptor Tyrosine Kinase Pathways

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.2         19           2
 C cysteine            1.9          7           1
 D aspartate           4.9         18           2
 E glutamate          11.8         43          12
 F phenylalanine       5.2         19           2
 G glycine             8.0         29           3
 H histidine           2.2          8           1
 I isoleucine          4.1         15           2
 K lysine             10.7         39           2
 L leucine             4.9         18           2
 M methionine          1.9          7           2
 N asparagine          4.1         15           2
 P proline             8.2         30           3
 Q glutamine           4.4         16           2
 R arginine            5.5         20           1
 S serine              3.6         13           2
 T threonine           3.6         13           1
 V valine              6.0         22           2
 W tryptophan          0.5          2           2
 Y tyrosine            3.0         11           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   SH3 and cysteine rich domain 3 
STAC                  0.285   SH3 and cysteine rich domain 
STAC2                 0.251   SH3 and cysteine rich domain 2 
GRAP2                 0.048   GRB2-related adaptor protein 2 
STAM                  0.045   signal transducing adaptor molecule 1 
NCF2                  0.042   neutrophil cytosolic factor 2 
NCF2                  0.042   neutrophil cytosolic factor 2 
DNMBP                 0.042   dynamin binding protein 
STAM2                 0.041   signal transducing adaptor molecule 2 
SH3YL1                0.041   SH3 domain containing, Ysc84-like 1 isoform 2 [Homo...
SH3YL1                0.041   SH3 domain containing, Ysc84-like 1 isoform 1 [Homo...
ITSN2                 0.040   intersectin 2 isoform 3 
ITSN2                 0.040   intersectin 2 isoform 1 
ITSN2                 0.040   intersectin 2 isoform 2 
ITSN1                 0.038   intersectin 1 isoform ITSN-s 
ITSN1                 0.038   intersectin 1 isoform ITSN-l 
PRKCH                 0.037   protein kinase C, eta 
PRKCQ                 0.035   protein kinase C, theta 
PRKCE                 0.035   protein kinase C, epsilon 
PRKCD                 0.034   protein kinase C, delta 
PRKCD                 0.034   protein kinase C, delta 
FRK                   0.034   fyn-related kinase 
BTK                   0.033   Bruton agammaglobulinemia tyrosine kinase 
LYN                   0.033   Yamaguchi sarcoma viral (v-yes-1) oncogene homolog is...
CTTN                  0.033   cortactin isoform a 
CTTN                  0.033   cortactin isoform b 
LYN                   0.033   Yamaguchi sarcoma viral (v-yes-1) oncogene homolog ...
CD2AP                 0.033   CD2-associated protein 
PRKD3                 0.031   protein kinase D3 
RASGRP1               0.031   RAS guanyl releasing protein 1 isoform b 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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