Guide to the Human Genome
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Name: ZAN Sequence: fasta or formatted (2721aa) NCBI GI: 27881494
Description:

zonadhesin isoform 6

Referenced in:

Mucins
Additional Genes in Development
Testes and Sperm

Other entries for this name:
alt prot [2812aa] zonadhesin isoform 3
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.4        147           2
 C cysteine            5.5        150           1
 D aspartate           3.9        105           2
 E glutamate           6.7        183           3
 F phenylalanine       2.9         78           2
 G glycine             7.8        211           3
 H histidine           2.1         57           2
 I isoleucine          4.2        113           2
 K lysine              4.8        130           2
 L leucine             7.7        210           4
 M methionine          1.6         44           2
 N asparagine          3.2         88           3
 P proline             9.4        255           3
 Q glutamine           4.2        114           2
 R arginine            3.9        106           2
 S serine              8.5        232           3
 T threonine           8.6        235           4
 V valine              5.8        159           4
 W tryptophan          1.4         38           1
 Y tyrosine            2.4         66           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zonadhesin isoform 6 
ZAN                   0.955   zonadhesin isoform 3 
FCGBP                 0.147   Fc fragment of IgG binding protein 
LOC100290309          0.146   PREDICTED: hypothetical protein XP_002348012 
LOC100133944          0.116   PREDICTED: similar to Fc fragment of IgG binding pr...
TECTA                 0.110   tectorin alpha precursor 
LOC100293676          0.093   PREDICTED: similar to Fc fragment of IgG binding pr...
LOC100132635          0.060   PREDICTED: similar to mucin 5, partial 
C12orf64              0.052   PREDICTED: chromosome 12 open reading frame 64 [Hom...
C12orf64              0.052   PREDICTED: chromosome 12 open reading frame 64 [Hom...
C12orf64              0.052   PREDICTED: hypothetical protein LOC283310 
MUC2                  0.048   mucin 2 precursor 
LOC100293643          0.048   PREDICTED: similar to Fc fragment of IgG binding pr...
VWF                   0.046   von Willebrand factor preproprotein 
SSPO                  0.046   SCO-spondin 
MUC5AC                0.042   mucin 5AC 
MUC5B                 0.042   mucin 5, subtype B, tracheobronchial 
OTOG                  0.040   PREDICTED: otogelin isoform 1 
OTOG                  0.040   PREDICTED: otogelin isoform 2 
OTOG                  0.040   PREDICTED: otogelin isoform 2 
OTOG                  0.040   PREDICTED: otogelin isoform 1 
OTOG                  0.040   PREDICTED: otogelin isoform 2 
OTOG                  0.040   PREDICTED: otogelin isoform 1 
KCP                   0.036   cysteine rich BMP regulator 2 isoform 1 
LOC100294420          0.033   PREDICTED: similar to mucin 2 
MUC6                  0.032   mucin 6, gastric 
POLR2A                0.030   DNA-directed RNA polymerase II A 
PRG4                  0.029   proteoglycan 4 isoform D 
PRG4                  0.029   proteoglycan 4 isoform C 
PRG4                  0.029   proteoglycan 4 isoform B 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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