RBM42 12885

Name: RBM42	Sequence: fasta or formatted (480aa)		NCBI GI: 21359951
Description: RNA binding motif protein 42		Referenced in: RNA-binding Proteins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 13.1 63 5 C cysteine 0.4 2 1 D aspartate 3.3 16 2 E glutamate 6.9 33 2 F phenylalanine 2.5 12 1 G glycine 10.0 48 2 H histidine 0.6 3 1 I isoleucine 2.7 13 2 K lysine 5.4 26 3 L leucine 10.2 49 2 M methionine 3.3 16 2 N asparagine 1.0 5 1 P proline 15.8 76 3 Q glutamine 2.1 10 2 R arginine 7.3 35 2 S serine 4.0 19 2 T threonine 2.3 11 1 V valine 7.5 36 2 W tryptophan 0.6 3 1 Y tyrosine 0.8 4 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 RNA binding motif protein 42 TAF4 0.046 TBP-associated factor 4 TIA1 0.045 TIA1 protein isoform 2 TIAL1 0.044 TIA-1 related protein isoform 2 TIAL1 0.044 TIA-1 related protein isoform 1 TIA1 0.044 TIA1 protein isoform 1 FLJ22184 0.043 PREDICTED: hypothetical protein FLJ22184 FLJ22184 0.043 PREDICTED: hypothetical protein FLJ22184 FLJ22184 0.041 PREDICTED: hypothetical protein LOC80164 PABPC4 0.039 poly A binding protein, cytoplasmic 4 isoform 3 [Ho... PABPC4 0.039 poly A binding protein, cytoplasmic 4 isoform 2 [Homo... PABPC4 0.039 poly A binding protein, cytoplasmic 4 isoform 1 [Ho... KIAA0754 0.038 hypothetical protein LOC643314 BCORL1 0.038 BCL6 co-repressor-like 1 RBMXL1 0.037 RNA binding motif protein, X-linked-like 1 RBMXL1 0.037 RNA binding motif protein, X-linked-like 1 SAMD1 0.037 sterile alpha motif domain containing 1 MLL2 0.037 myeloid/lymphoid or mixed-lineage leukemia 2 SRCAP 0.037 Snf2-related CBP activator protein WBP11 0.037 WW domain binding protein 11 RBMX 0.036 RNA binding motif protein, X-linked PABPC4L 0.036 poly(A) binding protein, cytoplasmic 4-like CIRBP 0.036 cold inducible RNA binding protein RBMXL3 0.035 RNA binding motif protein, X-linked-like 3 SYVN1 0.034 synoviolin 1 isoform a PABPC1 0.034 poly(A) binding protein, cytoplasmic 1 SF3B4 0.033 splicing factor 3b, subunit 4 RBMXL2 0.033 testes-specific heterogenous nuclear ribonucleoprot... PABPC1L 0.032 poly(A)-binding protein, cytoplasmic 1-like RBM39 0.032 RNA binding motif protein 39 isoform b Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.