Guide to the Human Genome
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Name: ELK3 Sequence: fasta or formatted (407aa) NCBI GI: 44955921
Description:

ELK3 protein

Referenced in:

Ets Family
Jun / Fos Complexes

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.1         33           4
 C cysteine            0.7          3           1
 D aspartate           3.4         14           1
 E glutamate           5.4         22           2
 F phenylalanine       3.9         16           2
 G glycine             3.4         14           1
 H histidine           2.7         11           1
 I isoleucine          4.4         18           2
 K lysine              6.9         28           2
 L leucine            13.3         54           3
 M methionine          1.2          5           1
 N asparagine          3.9         16           1
 P proline             9.6         39           2
 Q glutamine           2.5         10           1
 R arginine            3.4         14           1
 S serine             15.5         63           2
 T threonine           4.7         19           1
 V valine              4.2         17           2
 W tryptophan          1.0          4           1
 Y tyrosine            1.7          7           3
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ELK3 protein 
ELK4                  0.421   ELK4 protein isoform a 
ELK4                  0.315   ELK4 protein isoform b 
ELK1                  0.273   ELK1 protein 
ELK1                  0.273   ELK1 protein 
ETV4                  0.116   ets variant gene 4 (E1A enhancer binding protein, E...
ETV4                  0.116   ets variant gene 4 (E1A enhancer binding protein, E1...
ETV1                  0.112   ets variant gene 1 isoform f 
ETV1                  0.112   ets variant gene 1 isoform e 
ETV1                  0.112   ets variant gene 1 isoform d 
ETV1                  0.112   ets variant gene 1 isoform c 
ETV1                  0.112   ets variant gene 1 isoform c 
ETV1                  0.112   ets variant gene 1 isoform b 
ETV1                  0.112   ets variant gene 1 isoform a 
ETV5                  0.112   ets variant gene 5 (ets-related molecule) 
ERG                   0.109   ets-related isoform 4 
ERG                   0.109   ets-related isoform 2 
ERG                   0.109   ets-related isoform 1 
ERG                   0.109   ets-related isoform 3 
FLI1                  0.109   Friend leukemia virus integration 1 
FEV                   0.106   FEV (ETS oncogene family) 
ETS1                  0.104   v-ets erythroblastosis virus E26 oncogene homolog 1...
ETS1                  0.104   v-ets erythroblastosis virus E26 oncogene homolog 1 i...
ETS1                  0.104   v-ets erythroblastosis virus E26 oncogene homolog 1...
ETS2                  0.104   v-ets erythroblastosis virus E26 oncogene homolog 2 [...
GABPA                 0.100   GA binding protein transcription factor, alpha subun...
LOC390937             0.097   PREDICTED: similar to hCG2040171 
LOC390937             0.097   PREDICTED: similar to hCG2040171 
LOC390937             0.097   PREDICTED: similar to hCG2040171 
ELF1                  0.093   E74-like factor 1 (ets domain transcription factor) ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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