Guide to the Human Genome
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Name: ZNF518A Sequence: fasta or formatted (1483aa) NCBI GI: 57242807
Description:

zinc finger protein 518

Referenced in:

Kruppel-related Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.8         57           2
 C cysteine            2.8         42           1
 D aspartate           4.0         59           2
 E glutamate           6.1         91           3
 F phenylalanine       3.7         55           1
 G glycine             4.4         65           2
 H histidine           2.7         40           2
 I isoleucine          4.3         64           2
 K lysine             10.6        157           2
 L leucine             8.5        126           2
 M methionine          2.0         29           2
 N asparagine          7.0        104           3
 P proline             5.8         86           2
 Q glutamine           5.0         74           2
 R arginine            4.0         60           3
 S serine              9.8        145           4
 T threonine           6.6         98           2
 V valine              6.3         94           3
 W tryptophan          0.5          7           1
 Y tyrosine            2.0         30           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 518 
ZNF518B               0.045   zinc finger protein 518B 
ZNF366                0.019   zinc finger protein 366 
ZFP64                 0.018   zinc finger protein 64 isoform c 
ZFP64                 0.018   zinc finger protein 64 isoform b 
ZFP64                 0.018   zinc finger protein 64 isoform a 
ZNF730                0.017   PREDICTED: zinc finger protein 730 
ZNF730                0.017   PREDICTED: zinc finger protein 730 
ZNF730                0.017   PREDICTED: zinc finger protein 730 
ZFY                   0.017   zinc finger protein, Y-linked isoform 1 
ZFY                   0.017   zinc finger protein, Y-linked isoform 3 
ZFY                   0.017   zinc finger protein, Y-linked isoform 2 
PLAG1                 0.017   pleiomorphic adenoma gene 1 isoform a 
PLAG1                 0.017   pleiomorphic adenoma gene 1 isoform a 
REST                  0.017   RE1-silencing transcription factor 
CTCF                  0.017   CCCTC-binding factor 
ZNF708                0.017   zinc finger protein 708 
ZNF90                 0.017   zinc finger protein 90 
ZNF273                0.017   zinc finger protein 273 
PLAG1                 0.016   pleiomorphic adenoma gene 1 isoform b 
ZNF710                0.016   zinc finger protein 710 
ZNF808                0.016   zinc finger protein 808 
ZNF91                 0.016   zinc finger protein 91 
ZFP64                 0.016   zinc finger protein 64 isoform d 
ZFP37                 0.016   zinc finger protein 37 homolog 
LOC388559             0.016   PREDICTED: similar to hCG1778601 isoform 1 
LOC388559             0.016   PREDICTED: similar to hCG1778601 isoform 1 
LOC388559             0.016   PREDICTED: hypothetical protein LOC388559 
ZBTB48                0.016   zinc finger and BTB domain containing 48 
ZNF840                0.016   PREDICTED: zinc finger protein 840 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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