Guide to the Human Genome
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Name: MSL2 Sequence: fasta or formatted (503aa) NCBI GI: 224028284
Description:

ring finger protein 184 isoform 2

Referenced in:

Histones, Related Proteins, and Modifying Enzymes

Other entries for this name:
alt prot [577aa] ring finger protein 184 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.2         26           2
 C cysteine            4.8         24           2
 D aspartate           5.0         25           2
 E glutamate           5.8         29           2
 F phenylalanine       2.2         11           1
 G glycine             4.6         23           2
 H histidine           2.0         10           2
 I isoleucine          6.0         30           2
 K lysine              7.8         39           2
 L leucine             8.9         45           3
 M methionine          1.8          9           3
 N asparagine          4.4         22           1
 P proline             6.8         34           2
 Q glutamine           2.8         14           1
 R arginine            3.2         16           1
 S serine             13.1         66           2
 T threonine           8.9         45           2
 V valine              5.4         27           1
 W tryptophan          0.2          1           1
 Y tyrosine            1.4          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ring finger protein 184 isoform 2 
MSL2                  1.000   ring finger protein 184 isoform 1 
HEG1                  0.018   HEG homolog 1 
MUC17                 0.017   mucin 17 
MUC16                 0.016   mucin 16 
BIN2                  0.014   bridging integrator 2 
CGNL1                 0.012   cingulin-like 1 
MTL5                  0.012   metallothionein-like 5, testis-specific isoform a [H...
TCOF1                 0.010   Treacher Collins-Franceschetti syndrome 1 isoform f...
TCOF1                 0.010   Treacher Collins-Franceschetti syndrome 1 isoform e...
TCOF1                 0.010   Treacher Collins-Franceschetti syndrome 1 isoform d...
TCOF1                 0.010   Treacher Collins-Franceschetti syndrome 1 isoform b ...
TCOF1                 0.010   Treacher Collins-Franceschetti syndrome 1 isoform a ...
TCOF1                 0.010   Treacher Collins-Franceschetti syndrome 1 isoform c ...
MUC6                  0.010   mucin 6, gastric 
LOC100134138          0.008   PREDICTED: similar to mucin, partial 
LOC100133408          0.008   PREDICTED: similar to mucin 
MYBBP1A               0.008   MYB binding protein 1a isoform 1 
MYBBP1A               0.008   MYB binding protein 1a isoform 2 
C5orf41               0.008   luman-recruiting factor 
NACA                  0.008   nascent polypeptide-associated complex alpha subuni...
LOC100128719          0.008   PREDICTED: hypothetical protein, partial 
LOC100128719          0.008   PREDICTED: hypothetical protein, partial 
MYCBP2                0.008   MYC binding protein 2 
FAM65A                0.007   hypothetical protein LOC79567 
UBN2                  0.007   ubinuclein 2 
NFATC3                0.007   nuclear factor of activated T-cells, cytoplasmic, ca...
NFATC3                0.007   nuclear factor of activated T-cells, cytoplasmic, ca...
NFATC3                0.007   nuclear factor of activated T-cells, cytoplasmic, ca...
NFATC3                0.007   nuclear factor of activated T-cells, cytoplasmic, cal...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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