Guide to the Human Genome
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Name: FOXN3 Sequence: fasta or formatted (490aa) NCBI GI: 146232000
Description:

checkpoint suppressor 1 isoform 1

Referenced in:

FOX Family

Other entries for this name:
alt prot [468aa] checkpoint suppressor 1 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.7         28           2
 C cysteine            1.8          9           1
 D aspartate           6.5         32           3
 E glutamate           6.5         32           2
 F phenylalanine       3.3         16           2
 G glycine             6.5         32           2
 H histidine           2.9         14           1
 I isoleucine          3.9         19           1
 K lysine              7.1         35           2
 L leucine             6.9         34           2
 M methionine          2.0         10           2
 N asparagine          4.5         22           2
 P proline             9.4         46           2
 Q glutamine           3.7         18           1
 R arginine            4.7         23           2
 S serine             13.1         64           6
 T threonine           4.9         24           2
 V valine              3.3         16           2
 W tryptophan          1.0          5           1
 Y tyrosine            2.2         11           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   checkpoint suppressor 1 isoform 1 
FOXN3                 0.940   checkpoint suppressor 1 isoform 2 
FOXN2                 0.300   T-cell leukemia virus enhancer factor 
FOXN1                 0.090   forkhead box N1 
FOXN4                 0.087   forkhead box N4 
FOXJ1                 0.086   forkhead box J1 
FOXJ3                 0.081   forkhead box J3 
FOXJ2                 0.079   forkhead box J2 
FOXC1                 0.074   forkhead box C1 
FOXF1                 0.072   forkhead box F1 
FOXI1                 0.072   forkhead box I1 isoform a 
FOXD2                 0.072   forkhead box D2 
FOXF2                 0.071   forkhead box F2 
FOXG1                 0.071   forkhead box G1 
FOXL1                 0.071   forkhead box L1 
FOXC2                 0.070   forkhead box C2 
FOXI2                 0.069   forkhead box I2 
FOXI3                 0.069   forkhead box I3 
FOXE1                 0.067   forkhead box E1 
FOXE3                 0.067   forkhead box E3 
FOXL2                 0.067   forkhead box L2 
FOXA1                 0.067   forkhead box A1 
FOXK2                 0.067   forkhead box K2 
FOXD1                 0.066   forkhead box D1 
FOXK1                 0.065   forkhead box K1 
FOXA2                 0.064   forkhead box A2 isoform 2 
FOXA2                 0.064   forkhead box A2 isoform 1 
FOXB1                 0.064   forkhead box B1 
FOXB2                 0.064   forkhead box B2 
FOXQ1                 0.063   forkhead box Q1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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