Guide to the Human Genome
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Name: KRTAP9-4 Sequence: fasta or formatted (154aa) NCBI GI: 16118229
Description:

keratin associated protein 9-4

Referenced in:

Keratins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             1.3          2           1
 C cysteine           32.5         50           2
 D aspartate           0.6          1           1
 E glutamate           0.6          1           1
 F phenylalanine       1.3          2           1
 G glycine             1.9          3           1
 H histidine           0.6          1           1
 I isoleucine          0.0          0           0
 K lysine              0.6          1           1
 L leucine             1.3          2           1
 M methionine          0.6          1           1
 N asparagine          1.9          3           1
 P proline            11.7         18           1
 Q glutamine           7.8         12           1
 R arginine            3.9          6           2
 S serine             11.7         18           3
 T threonine          14.9         23           2
 V valine              3.9          6           1
 W tryptophan          0.6          1           1
 Y tyrosine            1.9          3           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   keratin associated protein 9-4 
KRTAP9-2              0.926   keratin associated protein 9.2 
KRTAP9-8              0.888   keratin associated protein 9.8 
KRTAP9-3              0.868   keratin associated protein 9.3 
KRTAP9-9              0.844   keratin associated protein 9-9 
LOC728341             0.827   PREDICTED: keratin-associated protein 9-2-like 1-li...
LOC732428             0.767   PREDICTED: keratin-associated protein 9-2-like 2-li...
LOC728318             0.721   PREDICTED: hypothetical protein 
LOC728318             0.721   PREDICTED: hypothetical protein 
LOC728318             0.721   PREDICTED: hypothetical protein 
KRTAP4-9              0.474   PREDICTED: keratin associated protein 4-9 isoform 2...
KRTAP4-3              0.474   keratin associated protein 4-3 
KRTAP4-9              0.468   PREDICTED: keratin associated protein 4-9 isoform 1...
KRTAP4-9              0.468   keratin associated protein 4-9 
KRTAP4-8              0.463   PREDICTED: keratin associated protein 4-8 isoform 1...
LOC100134267          0.463   PREDICTED: similar to keratin associated protein 4-...
KRTAP4-8              0.458   PREDICTED: keratin associated protein 4-8 isoform 3...
LOC100134267          0.458   PREDICTED: similar to keratin associated protein 4-...
KRTAP4-8              0.455   PREDICTED: keratin associated protein 4-8 isoform 2...
LOC100134267          0.455   PREDICTED: similar to keratin associated protein 4-...
KRTAP4-11             0.455   keratin associated protein 4-11 
KRTAP4-12             0.452   keratin associated protein 4-12 
KRTAP4-8              0.447   PREDICTED: keratin associated protein 4-8 
KRTAP4-8              0.433   PREDICTED: keratin associated protein 4.8 
KRTAP4-8              0.433   keratin associated protein 4.8 
KRTAP4-5              0.422   keratin associated protein 4-5 
KRTAP4-4              0.419   keratin associated protein 4.4 
KRTAP4-7              0.416   keratin associated protein 4-7 
KRTAP4-7              0.416   PREDICTED: keratin associated protein 4-7 
KRTAP4-2              0.378   keratin associated protein 4-2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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