Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: WFDC12 Sequence: fasta or formatted (111aa) NCBI GI: 20069858
Description:

WAP four-disulfide core domain 12 precursor

Referenced in:

Protease Inhibitors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.6          4           1
 C cysteine            9.0         10           2
 D aspartate           5.4          6           1
 E glutamate           9.0         10           2
 F phenylalanine       2.7          3           1
 G glycine             9.0         10           2
 H histidine           1.8          2           1
 I isoleucine          1.8          2           1
 K lysine              8.1          9           1
 L leucine             7.2          8           1
 M methionine          1.8          2           1
 N asparagine          1.8          2           1
 P proline             8.1          9           2
 Q glutamine           2.7          3           1
 R arginine            3.6          4           1
 S serine              8.1          9           3
 T threonine           2.7          3           1
 V valine             10.8         12           1
 W tryptophan          0.9          1           1
 Y tyrosine            1.8          2           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   WAP four-disulfide core domain 12 precursor 
SLPI                  0.148   secretory leukocyte peptidase inhibitor precursor [Ho...
WFDC5                 0.125   WAP four-disulfide core domain 5 precursor 
WFDC8                 0.116   WAP four-disulfide core domain 8 precursor 
WFDC8                 0.116   WAP four-disulfide core domain 8 precursor 
PI3                   0.102   elafin preproprotein 
SPINLW1               0.088   serine peptidase inhibitor-like, with Kunitz and WAP...
WFDC3                 0.083   WAP four-disulfide core domain 3 precursor 
WFDC2                 0.083   WAP four-disulfide core domain 2 precursor 
WFDC6                 0.074   WAP four-disulfide core domain 6 precursor 
KAL1                  0.056   Kallmann syndrome 1 protein precursor 
SPINLW1               0.051   serine peptidase inhibitor-like, with Kunitz and WAP...
WFIKKN2               0.051   WFIKKN2 protein 
WFIKKN1               0.037   WAP, follistatin/kazal, immunoglobulin, kunitz and n...
WFDC1                 0.032   WAP four-disulfide core domain 1 precursor 
UMODL1                0.032   uromodulin-like 1 isoform 1 precursor 
UMODL1                0.032   uromodulin-like 1 isoform 2 precursor 
SPP1                  0.028   secreted phosphoprotein 1 isoform b 
SPP1                  0.028   secreted phosphoprotein 1 isoform a 
C1orf113              0.014   SH3 domain-containing protein C1orf113 isoform 1 [H...
C1orf113              0.014   SH3 domain-containing protein C1orf113 isoform 2 [H...
SFRS14                0.014   splicing factor, arginine/serine-rich 14 
SFRS14                0.014   splicing factor, arginine/serine-rich 14 
ZFP64                 0.014   zinc finger protein 64 isoform d 
LTBP3                 0.014   latent transforming growth factor beta binding prot...
LTBP3                 0.014   latent transforming growth factor beta binding prote...
FBLN5                 0.009   fibulin 5 precursor 
ZZEF1                 0.009   zinc finger, ZZ type with EF hand domain 1 
CASZ1                 0.009   castor homolog 1, zinc finger isoform a 
ENPP2                 0.009   autotaxin isoform 3 preproprotein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press