Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: PI3 Sequence: fasta or formatted (117aa) NCBI GI: 4505787
Description:

elafin preproprotein

Referenced in:

Protease Inhibitors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.0          7           2
 C cysteine            6.8          8           2
 D aspartate           4.3          5           1
 E glutamate           2.6          3           1
 F phenylalanine       3.4          4           1
 G glycine            10.3         12           1
 H histidine           0.0          0           0
 I isoleucine          5.1          6           2
 K lysine              9.4         11           2
 L leucine             6.0          7           1
 M methionine          2.6          3           1
 N asparagine          2.6          3           1
 P proline             9.4         11           2
 Q glutamine           5.1          6           1
 R arginine            3.4          4           1
 S serine              5.1          6           2
 T threonine           4.3          5           1
 V valine             13.7         16           3
 W tryptophan          0.0          0           0
 Y tyrosine            0.0          0           0
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   elafin preproprotein 
SLPI                  0.165   secretory leukocyte peptidase inhibitor precursor [Ho...
WFDC5                 0.115   WAP four-disulfide core domain 5 precursor 
WFDC12                0.101   WAP four-disulfide core domain 12 precursor 
WFDC8                 0.083   WAP four-disulfide core domain 8 precursor 
WFDC8                 0.083   WAP four-disulfide core domain 8 precursor 
WFDC3                 0.083   WAP four-disulfide core domain 3 precursor 
UMODL1                0.069   uromodulin-like 1 isoform 1 precursor 
UMODL1                0.069   uromodulin-like 1 isoform 2 precursor 
WFDC2                 0.064   WAP four-disulfide core domain 2 precursor 
KAL1                  0.064   Kallmann syndrome 1 protein precursor 
SPINLW1               0.050   serine peptidase inhibitor-like, with Kunitz and WAP...
SPINLW1               0.046   serine peptidase inhibitor-like, with Kunitz and WAP...
WFDC1                 0.037   WAP four-disulfide core domain 1 precursor 
WFDC6                 0.037   WAP four-disulfide core domain 6 precursor 
LOC100131397          0.032   PREDICTED: hypothetical protein 
LOC100131397          0.032   PREDICTED: hypothetical protein 
LOC100131397          0.032   PREDICTED: hypothetical protein 
WFIKKN1               0.023   WAP, follistatin/kazal, immunoglobulin, kunitz and n...
FBN2                  0.018   fibrillin 2 precursor 
AIMP1                 0.018   small inducible cytokine subfamily E, member 1 isof...
AIMP1                 0.018   small inducible cytokine subfamily E, member 1 isof...
AIMP1                 0.018   small inducible cytokine subfamily E, member 1 isofo...
ARL4D                 0.018   ADP-ribosylation factor-like 4D 
COL21A1               0.014   collagen, type XXI, alpha 1 precursor 
LTBP4                 0.014   latent transforming growth factor beta binding prot...
LTBP4                 0.014   latent transforming growth factor beta binding prot...
FNDC1                 0.014   fibronectin type III domain containing 1 
SEC61A1               0.014   Sec61 alpha 1 subunit 
MYST3                 0.009   MYST histone acetyltransferase (monocytic leukemia)...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press