Guide to the Human Genome
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Name: KRTAP9-3 Sequence: fasta or formatted (159aa) NCBI GI: 13994368
Description:

keratin associated protein 9.3

Referenced in:

Keratins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             1.3          2           1
 C cysteine           32.7         52           2
 D aspartate           0.0          0           0
 E glutamate           0.6          1           1
 F phenylalanine       0.6          1           1
 G glycine             2.5          4           1
 H histidine           1.9          3           1
 I isoleucine          0.6          1           1
 K lysine              0.0          0           0
 L leucine             1.3          2           1
 M methionine          0.6          1           1
 N asparagine          1.9          3           1
 P proline            11.3         18           1
 Q glutamine           8.2         13           1
 R arginine            3.8          6           2
 S serine             11.9         19           3
 T threonine          14.5         23           2
 V valine              3.8          6           1
 W tryptophan          0.6          1           1
 Y tyrosine            1.9          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   keratin associated protein 9.3 
KRTAP9-2              0.923   keratin associated protein 9.2 
LOC728341             0.921   PREDICTED: keratin-associated protein 9-2-like 1-li...
KRTAP9-8              0.910   keratin associated protein 9.8 
KRTAP9-4              0.836   keratin associated protein 9-4 
KRTAP9-9              0.815   keratin associated protein 9-9 
LOC732428             0.752   PREDICTED: keratin-associated protein 9-2-like 2-li...
LOC728318             0.715   PREDICTED: hypothetical protein 
LOC728318             0.715   PREDICTED: hypothetical protein 
LOC728318             0.715   PREDICTED: hypothetical protein 
KRTAP4-8              0.467   PREDICTED: keratin associated protein 4-8 isoform 3...
LOC100134267          0.467   PREDICTED: similar to keratin associated protein 4-...
KRTAP4-9              0.464   keratin associated protein 4-9 
KRTAP4-9              0.464   PREDICTED: keratin associated protein 4-9 isoform 1...
KRTAP4-8              0.459   PREDICTED: keratin associated protein 4-8 isoform 1...
LOC100134267          0.459   PREDICTED: similar to keratin associated protein 4-...
KRTAP4-12             0.459   keratin associated protein 4-12 
KRTAP4-3              0.454   keratin associated protein 4-3 
KRTAP4-8              0.451   PREDICTED: keratin associated protein 4-8 isoform 2...
LOC100134267          0.451   PREDICTED: similar to keratin associated protein 4-...
KRTAP4-8              0.446   PREDICTED: keratin associated protein 4-8 
KRTAP4-9              0.438   PREDICTED: keratin associated protein 4-9 isoform 2...
KRTAP4-11             0.425   keratin associated protein 4-11 
KRTAP4-4              0.425   keratin associated protein 4.4 
KRTAP4-5              0.425   keratin associated protein 4-5 
KRTAP4-8              0.417   PREDICTED: keratin associated protein 4.8 
KRTAP4-8              0.417   keratin associated protein 4.8 
KRTAP4-7              0.388   keratin associated protein 4-7 
KRTAP4-7              0.388   PREDICTED: keratin associated protein 4-7 
KRTAP4-2              0.380   keratin associated protein 4-2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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