Guide to the Human Genome
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Name: WFDC5 Sequence: fasta or formatted (123aa) NCBI GI: 21717822
Description:

WAP four-disulfide core domain 5 precursor

Referenced in:

Protease Inhibitors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.9          6           1
 C cysteine           13.0         16           2
 D aspartate           7.3          9           2
 E glutamate           2.4          3           1
 F phenylalanine       1.6          2           1
 G glycine             8.9         11           2
 H histidine           2.4          3           1
 I isoleucine          0.0          0           0
 K lysine              6.5          8           2
 L leucine            11.4         14           4
 M methionine          1.6          2           1
 N asparagine          0.8          1           1
 P proline             8.1         10           2
 Q glutamine           4.9          6           1
 R arginine            8.9         11           1
 S serine              8.9         11           1
 T threonine           1.6          2           1
 V valine              5.7          7           1
 W tryptophan          0.0          0           0
 Y tyrosine            0.8          1           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   WAP four-disulfide core domain 5 precursor 
SLPI                  0.194   secretory leukocyte peptidase inhibitor precursor [Ho...
WFDC3                 0.162   WAP four-disulfide core domain 3 precursor 
WFDC8                 0.154   WAP four-disulfide core domain 8 precursor 
WFDC8                 0.154   WAP four-disulfide core domain 8 precursor 
WFDC2                 0.130   WAP four-disulfide core domain 2 precursor 
WFDC12                0.109   WAP four-disulfide core domain 12 precursor 
PI3                   0.101   elafin preproprotein 
SPINLW1               0.077   serine peptidase inhibitor-like, with Kunitz and WAP...
KAL1                  0.061   Kallmann syndrome 1 protein precursor 
SPINLW1               0.057   serine peptidase inhibitor-like, with Kunitz and WAP...
WFDC1                 0.049   WAP four-disulfide core domain 1 precursor 
LRP1B                 0.040   low density lipoprotein-related protein 1B precursor...
KRTAP5-8              0.036   keratin associated protein 5-8 
UMODL1                0.032   uromodulin-like 1 isoform 1 precursor 
UMODL1                0.032   uromodulin-like 1 isoform 2 precursor 
KRTAP5-3              0.032   keratin associated protein 5-3 
KRTAP4-8              0.032   PREDICTED: keratin associated protein 4-8 
KRTAP10-1             0.032   keratin associated protein 10-1 
GRN                   0.028   granulin precursor 
SMCP                  0.028   sperm mitochondria-associated cysteine-rich protein ...
KRTAP5-9              0.028   keratin associated protein 5-9 
WFDC6                 0.028   WAP four-disulfide core domain 6 precursor 
KRTAP10-7             0.028   keratin associated protein 10-7 
KRTAP4-11             0.024   keratin associated protein 4-11 
FBN2                  0.024   fibrillin 2 precursor 
KRTAP4-12             0.024   keratin associated protein 4-12 
WFDC10A               0.024   WAP four-disulfide core domain 10A precursor 
FBLN5                 0.020   fibulin 5 precursor 
KRTAP4-9              0.020   PREDICTED: keratin associated protein 4-9 isoform 1...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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