Guide to the Human Genome
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Name: KRT84 Sequence: fasta or formatted (600aa) NCBI GI: 15431316
Description:

keratin, hair, basic, 4

Referenced in:

Keratins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.3         50           2
 C cysteine            3.3         20           1
 D aspartate           3.7         22           1
 E glutamate           7.5         45           3
 F phenylalanine       3.7         22           1
 G glycine             9.8         59           2
 H histidine           1.0          6           1
 I isoleucine          4.0         24           2
 K lysine              4.7         28           3
 L leucine             9.2         55           2
 M methionine          1.7         10           1
 N asparagine          4.2         25           2
 P proline             3.3         20           1
 Q glutamine           4.7         28           2
 R arginine            6.8         41           2
 S serine              9.8         59           3
 T threonine           4.7         28           3
 V valine              7.0         42           2
 W tryptophan          0.5          3           1
 Y tyrosine            2.2         13           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   keratin, hair, basic, 4 
KRT85                 0.475   keratin 85 
KRT81                 0.447   keratin, hair, basic, 1 
KRT82                 0.446   keratin 82 
LOC100293351          0.445   PREDICTED: hypothetical protein isoform 2 
LOC100293351          0.445   PREDICTED: hypothetical protein isoform 1 
LOC100293351          0.445   PREDICTED: hypothetical protein isoform 3 
KRT86                 0.445   keratin 86 
KRT83                 0.442   keratin 83 
KRT5                  0.441   keratin 5 
KRT6A                 0.429   keratin 6A 
KRT6C                 0.425   keratin 6C 
KRT6B                 0.424   keratin 6B 
KRT75                 0.415   keratin 75 
KRT76                 0.392   keratin 76 
KRT1                  0.383   keratin 1 
KRT3                  0.380   keratin 3 
KRT7                  0.380   keratin 7 
KRT79                 0.371   keratin 6L 
KRT8                  0.370   keratin 8 
KRT4                  0.365   keratin 4 
KRT2                  0.359   keratin 2 
KRT71                 0.356   keratin 71 
KRT73                 0.355   keratin 73 
KRT72                 0.348   keratin 72 isoform 1 
KRT72                 0.348   keratin 72 isoform 1 
KRT74                 0.345   keratin 6 irs4 
KRT77                 0.343   keratin 77 
KRT78                 0.297   keratin 5b 
KRT72                 0.273   keratin 72 isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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