Guide to the Human Genome
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Name: MED26 Sequence: fasta or formatted (600aa) NCBI GI: 28558977
Description:

mediator complex subunit 26

Referenced in:

Nuclear Receptors
RNA Polymerase and General Transcription Factors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.3         44           2
 C cysteine            1.3          8           1
 D aspartate           5.7         34           2
 E glutamate           5.7         34           2
 F phenylalanine       1.2          7           1
 G glycine             7.3         44           2
 H histidine           2.8         17           2
 I isoleucine          2.7         16           2
 K lysine              5.8         35           4
 L leucine             9.8         59           2
 M methionine          0.8          5           1
 N asparagine          3.0         18           1
 P proline            11.0         66           3
 Q glutamine           6.7         40           2
 R arginine            7.7         46           2
 S serine             10.7         64           3
 T threonine           3.8         23           1
 V valine              4.3         26           1
 W tryptophan          1.0          6           1
 Y tyrosine            1.3          8           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   mediator complex subunit 26 
COL1A1                0.028   alpha 1 type I collagen preproprotein 
TCEA1                 0.028   transcription elongation factor A 1 isoform 1 
LOC100289899          0.026   PREDICTED: hypothetical protein XP_002347041 
TCEA2                 0.023   transcription elongation factor A protein 2 isoform a...
COL1A2                0.023   alpha 2 type I collagen 
PRB1                  0.023   proline-rich protein BstNI subfamily 1 isoform 1 pre...
COL3A1                0.022   collagen type III alpha 1 preproprotein 
SRRM1                 0.022   serine/arginine repetitive matrix 1 
TCEA3                 0.021   transcription elongation factor A (SII), 3 
TCEA2                 0.021   transcription elongation factor A protein 2 isoform ...
SYNJ1                 0.020   synaptojanin 1 isoform d 
ZC3H4                 0.020   zinc finger CCCH-type containing 4 
MAP7D1                0.020   MAP7 domain containing 1 
MLL2                  0.019   myeloid/lymphoid or mixed-lineage leukemia 2 
BAT2                  0.019   HLA-B associated transcript-2 
COL4A4                0.019   alpha 4 type IV collagen precursor 
COL19A1               0.019   alpha 1 type XIX collagen precursor 
KIAA1522              0.018   hypothetical protein LOC57648 
COL22A1               0.018   collagen, type XXII, alpha 1 
SYDE1                 0.018   synapse defective 1, Rho GTPase, homolog 1 
KIF26B                0.018   kinesin family member 26B 
COL8A2                0.018   collagen, type VIII, alpha 2 
PRB2                  0.018   proline-rich protein BstNI subfamily 2 
COL23A1               0.018   collagen, type XXIII, alpha 1 
COL7A1                0.018   alpha 1 type VII collagen precursor 
COL2A1                0.018   collagen, type II, alpha 1 isoform 1 precursor [Hom...
COL2A1                0.018   collagen, type II, alpha 1 isoform 2 precursor [Hom...
LOC100131102          0.018   PREDICTED: hypothetical protein 
COL9A1                0.018   alpha 1 type IX collagen isoform 1 precursor 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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