SYNJ1 16104

Name: SYNJ1	Sequence: fasta or formatted (1526aa)		NCBI GI: 237757326
Description: synaptojanin 1 isoform d		Referenced in: Inositol Pathways Synapses
Other entries for this name: alt prot [1350aa] synaptojanin 1 isoform b alt prot [1612aa] synaptojanin 1 isoform a alt prot [1295aa] synaptojanin 1 isoform c
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.9 106 2 C cysteine 1.3 20 1 D aspartate 5.2 79 2 E glutamate 5.8 89 4 F phenylalanine 5.0 76 2 G glycine 6.1 93 2 H histidine 1.7 26 1 I isoleucine 4.1 63 2 K lysine 5.5 84 2 L leucine 9.5 145 3 M methionine 1.6 25 1 N asparagine 3.9 60 2 P proline 8.2 125 5 Q glutamine 4.8 74 2 R arginine 5.3 81 3 S serine 10.6 162 4 T threonine 5.4 83 2 V valine 5.9 90 2 W tryptophan 1.2 19 1 Y tyrosine 1.7 26 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 synaptojanin 1 isoform d SYNJ1 0.987 synaptojanin 1 isoform a SYNJ1 0.811 synaptojanin 1 isoform c SYNJ1 0.809 synaptojanin 1 isoform b SYNJ2 0.382 synaptojanin 2 INPP5B 0.061 inositol polyphosphate-5-phosphatase, 75kDa precurs... OCRL 0.060 phosphatidylinositol polyphosphate 5-phosphatase iso... OCRL 0.060 phosphatidylinositol polyphosphate 5-phosphatase iso... SACM1L 0.060 suppressor of actin 1 INPP5F 0.057 inositol polyphosphate-5-phosphatase F INPP5D 0.049 SH2 containing inositol phosphatase isoform b INPP5D 0.049 SH2 containing inositol phosphatase isoform a INPP5J 0.044 phosphatidylinositol (4,5) bisphosphate 5-phosphatas... INPPL1 0.043 inositol polyphosphate phosphatase-like 1 INPP5E 0.037 inositol polyphosphate-5-phosphatase E INPP5K 0.036 inositol polyphosphate-5-phosphatase K isoform 1 [Ho... FIG4 0.035 Sac domain-containing inositol phosphatase 3 INPP5K 0.033 inositol polyphosphate-5-phosphatase K isoform 2 [H... INPP5K 0.033 inositol polyphosphate-5-phosphatase K isoform 2 [Ho... FLJ22184 0.024 PREDICTED: hypothetical protein FLJ22184 MUC2 0.023 mucin 2 precursor PRG4 0.022 proteoglycan 4 isoform D PRG4 0.022 proteoglycan 4 isoform C PRG4 0.022 proteoglycan 4 isoform B PRG4 0.022 proteoglycan 4 isoform A NACA 0.022 nascent polypeptide-associated complex alpha subuni... MLL2 0.021 myeloid/lymphoid or mixed-lineage leukemia 2 RAPH1 0.021 Ras association and pleckstrin homology domains 1 is... FLJ22184 0.020 PREDICTED: hypothetical protein LOC80164 RERE 0.020 atrophin-1 like protein isoform b Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.