TCEA1 33520

Name: TCEA1	Sequence: fasta or formatted (301aa)		NCBI GI: 5803191
Description: transcription elongation factor A 1 isoform 1		Referenced in: RNA Polymerase and General Transcription Factors
Other entries for this name: alt prot [280aa] transcription elongation factor A 1 isoform 2
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.6 23 3 C cysteine 2.7 8 1 D aspartate 6.3 19 2 E glutamate 9.3 28 3 F phenylalanine 2.0 6 1 G glycine 4.0 12 2 H histidine 0.3 1 1 I isoleucine 4.3 13 1 K lysine 10.6 32 3 L leucine 7.6 23 2 M methionine 4.0 12 1 N asparagine 6.0 18 1 P proline 3.3 10 2 Q glutamine 3.3 10 1 R arginine 6.6 20 1 S serine 7.6 23 2 T threonine 7.6 23 2 V valine 4.3 13 2 W tryptophan 0.7 2 1 Y tyrosine 1.7 5 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 transcription elongation factor A 1 isoform 1 LOC100289899 0.953 PREDICTED: hypothetical protein XP_002347041 TCEA1 0.911 transcription elongation factor A 1 isoform 2 TCEA2 0.640 transcription elongation factor A protein 2 isoform a... TCEA2 0.590 transcription elongation factor A protein 2 isoform ... TCEA3 0.548 transcription elongation factor A (SII), 3 TCEANC 0.180 TFIIS central domain-containing protein 1 PHF3 0.086 PHD finger protein 3 MED26 0.058 mediator complex subunit 26 DIDO1 0.047 death inducer-obliterator 1 isoform c DIDO1 0.047 death inducer-obliterator 1 isoform b TCEB3 0.045 elongin A SPOCD1 0.045 SPOC domain containing 1 POLR3K 0.042 DNA directed RNA polymerase III polypeptide K C1orf83 0.037 hypothetical protein LOC127428 PPP1R10 0.028 protein phosphatase 1, regulatory subunit 10 GCC2 0.023 GRIP and coiled-coil domain-containing 2 ATAD5 0.019 ATPase family, AAA domain containing 5 TCEB3CL 0.019 transcription elongation factor B polypeptide 3C-li... TCEB3C 0.019 transcription elongation factor B polypeptide 3C [H... ZNF12 0.017 zinc finger protein 12 isoform b ZNF12 0.017 zinc finger protein 12 isoform a PDE4DIP 0.017 phosphodiesterase 4D interacting protein isoform 2 [... PDE4DIP 0.017 phosphodiesterase 4D interacting protein isoform 1 ... PHF14 0.017 PHD finger protein 14 isoform 2 TCEB3B 0.017 elongin A2 PHF14 0.017 PHD finger protein 14 isoform 1 PDE4DIP 0.017 phosphodiesterase 4D interacting protein isoform 5 [... ZNF776 0.016 zinc finger protein 776 ZNF383 0.016 zinc finger protein 383 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.