| Name: GPA33 | Sequence: fasta or formatted (319aa) | NCBI GI: 5031561 | |
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Description: transmembrane glycoprotein A33 precursor
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Referenced in: Extracellular Matrix
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Composition:
Amino acid Percentage Count Longest homopolymer A alanine 4.7 15 2 C cysteine 3.4 11 4 D aspartate 5.0 16 2 E glutamate 8.8 28 3 F phenylalanine 0.6 2 1 G glycine 5.6 18 1 H histidine 1.3 4 1 I isoleucine 6.9 22 3 K lysine 3.8 12 1 L leucine 7.5 24 3 M methionine 1.6 5 1 N asparagine 5.3 17 2 P proline 5.3 17 2 Q glutamine 5.3 17 1 R arginine 5.6 18 1 S serine 9.4 30 2 T threonine 7.2 23 1 V valine 7.2 23 2 W tryptophan 1.6 5 1 Y tyrosine 3.8 12 2 |
Comparative genomics:
Search single species RefSeq proteins at NCBI
Search summary 
Figure data | ||
Related human proteins:Protein Relative score Description Self-match 1.000 transmembrane glycoprotein A33 precursor CXADR 0.179 coxsackie virus and adenovirus receptor precursor [Ho... IGSF11 0.165 immunoglobulin superfamily, member 11 isoform a [Hom... VSIG1 0.158 V-set and immunoglobulin domain containing 1 IGSF11 0.157 immunoglobulin superfamily, member 11 isoform b [Hom... VSIG2 0.147 V-set and immunoglobulin domain containing 2 ASAM 0.142 adipocyte-specific adhesion molecule ESAM 0.130 endothelial cell adhesion molecule F11R 0.115 F11 receptor precursor VSIG8 0.102 V-set and immunoglobulin domain containing 8 JAM2 0.096 junctional adhesion molecule 2 precursor JAM3 0.088 junctional adhesion molecule 3 precursor HEPACAM 0.067 hepatocyte cell adhesion molecule CD276 0.064 CD276 antigen isoform a CD276 0.059 CD276 antigen isoform b VSIG4 0.059 V-set and immunoglobulin domain containing 4 isoform ... CEACAM6 0.053 carcinoembryonic antigen-related cell adhesion molec... LOC100292387 0.053 PREDICTED: similar to hemicentin 2 HMCN2 0.053 PREDICTED: hemicentin 2 LOC100289200 0.053 PREDICTED: hypothetical protein XP_002342997 NTM 0.051 neurotrimin isoform 4 NTM 0.051 neurotrimin isoform 3 NTM 0.051 neurotrimin isoform 2 NTM 0.051 neurotrimin isoform 1 NEGR1 0.050 neuronal growth regulator 1 PVRL4 0.050 poliovirus receptor-related 4 DSCAM 0.048 Down syndrome cell adhesion molecule isoform CHD2-42... FLJ20674 0.048 hypothetical protein FLJ20674 CEACAM5 0.046 carcinoembryonic antigen-related cell adhesion molec... OBSCN 0.046 obscurin, cytoskeletal calmodulin and titin-interact...Human BLASTP results (used to prepare the table) | |||
Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.
See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.
