Guide to the Human Genome
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Name: CD2 Sequence: fasta or formatted (351aa) NCBI GI: 156071472
Description:

CD2 molecule

Referenced in:

T cells

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.6         16           2
 C cysteine            1.7          6           1
 D aspartate           4.8         17           2
 E glutamate           5.4         19           2
 F phenylalanine       3.4         12           1
 G glycine             5.4         19           3
 H histidine           3.4         12           1
 I isoleucine          6.0         21           2
 K lysine             11.1         39           3
 L leucine             7.1         25           2
 M methionine          1.1          4           1
 N asparagine          3.7         13           1
 P proline             9.1         32           5
 Q glutamine           5.4         19           2
 R arginine            4.8         17           2
 S serine              8.3         29           2
 T threonine           6.6         23           2
 V valine              5.1         18           1
 W tryptophan          1.1          4           1
 Y tyrosine            1.7          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   CD2 molecule 
HEPACAM               0.070   hepatocyte cell adhesion molecule 
ASAM                  0.047   adipocyte-specific adhesion molecule 
PRB4                  0.042   proline-rich protein BstNI subfamily 4 precursor [Ho...
PRB3                  0.040   proline-rich protein BstNI subfamily 3 precursor [H...
MYST3                 0.034   MYST histone acetyltransferase (monocytic leukemia)...
MYST3                 0.034   MYST histone acetyltransferase (monocytic leukemia)...
MYST3                 0.034   MYST histone acetyltransferase (monocytic leukemia)...
PRB1                  0.034   proline-rich protein BstNI subfamily 1 isoform 1 pre...
EP300                 0.033   E1A binding protein p300 
EP400                 0.033   E1A binding protein p400 
PRB2                  0.033   proline-rich protein BstNI subfamily 2 
CBLL1                 0.033   Cas-Br-M (murine) ecotropic retroviral transforming...
PRB1                  0.033   proline-rich protein BstNI subfamily 1 isoform 3 pre...
PRH1                  0.033   proline-rich protein HaeIII subfamily 1 
PRH2                  0.033   proline-rich protein HaeIII subfamily 2 
PRH2                  0.033   proline-rich protein HaeIII subfamily 2 
WASL                  0.032   Wiskott-Aldrich syndrome gene-like protein 
SFPQ                  0.032   splicing factor proline/glutamine rich (polypyrimidin...
SYNJ1                 0.032   synaptojanin 1 isoform a 
SYNJ1                 0.032   synaptojanin 1 isoform b 
PRB1                  0.032   proline-rich protein BstNI subfamily 1 isoform 2 pre...
TNRC18                0.030   trinucleotide repeat containing 18 
NHS                   0.029   Nance-Horan syndrome protein isoform 1 
SYN1                  0.029   synapsin I isoform Ia 
SYN1                  0.029   synapsin I isoform Ib 
SIN3A                 0.029   transcriptional co-repressor Sin3A 
SIN3A                 0.029   transcriptional co-repressor Sin3A 
SIN3A                 0.029   transcriptional co-repressor Sin3A 
SETD1A                0.029   SET domain containing 1A 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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