Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 121114300
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|121114300 carcinoembryonic antigen-related cell adhesion
molecule 3 precursor [Homo sapiens]
(252 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|121114300 carcinoembryonic antigen-related cell adhesion mole... 506 e-144
gi|71143132 carcinoembryonic antigen-related cell adhesion molec... 318 2e-87
gi|98986445 carcinoembryonic antigen-related cell adhesion molec... 250 9e-67
gi|40255013 carcinoembryonic antigen-related cell adhesion molec... 250 9e-67
gi|68161541 carcinoembryonic antigen-related cell adhesion molec... 244 4e-65
gi|19923195 carcinoembryonic antigen-related cell adhesion molec... 244 4e-65
gi|21314600 carcinoembryonic antigen-related cell adhesion molec... 202 2e-52
gi|5901930 carcinoembryonic antigen-related cell adhesion molecu... 194 8e-50
gi|52317156 carcinoembryonic antigen-related cell adhesion molec... 167 1e-41
gi|148612793 carcinoembryonic antigen-related cell adhesion mole... 167 1e-41
gi|157805480 pregnancy specific beta-1-glycoprotein 7 precursor ... 166 1e-41
gi|194328710 pregnancy specific beta-1-glycoprotein 8 isoform b ... 166 2e-41
gi|51510887 pregnancy specific beta-1-glycoprotein 8 isoform a [... 166 2e-41
gi|47419900 pregnancy specific beta-1-glycoprotein 4 isoform 2 [... 163 2e-40
gi|42560235 pregnancy specific beta-1-glycoprotein 4 isoform 1 [... 163 2e-40
gi|21361392 pregnancy specific beta-1-glycoprotein 1 [Homo sapiens] 160 8e-40
gi|156616284 pregnancy specific beta-1-glycoprotein 9 [Homo sapi... 160 8e-40
gi|194097369 pregnancy specific beta-1-glycoprotein 5 [Homo sapi... 160 8e-40
gi|194097367 pregnancy specific beta-1-glycoprotein 5 [Homo sapi... 160 8e-40
gi|156616282 pregnancy specific beta-1-glycoprotein 2 [Homo sapi... 160 1e-39
gi|4506175 pregnancy specific beta-1-glycoprotein 6 isoform a [H... 159 3e-39
gi|73661174 pregnancy specific beta-1-glycoprotein 6 isoform b [... 159 3e-39
gi|109240546 pregnancy specific beta-1-glycoprotein 3 [Homo sapi... 159 3e-39
gi|164663836 pregnancy specific beta-1-glycoprotein 11 isoform 1... 158 4e-39
gi|85861202 carcinoembryonic antigen-related cell adhesion molec... 79 3e-15
gi|189217881 carcinoembryonic antigen-related cell adhesion mole... 65 4e-11
gi|45267817 carcinoembryonic antigen-related cell adhesion molec... 65 4e-11
gi|122937205 carcinoembryonic antigen-related cell adhesion mole... 55 8e-08
gi|156564390 carcinoembryonic antigen-related cell adhesion mole... 50 2e-06
gi|156564378 carcinoembryonic antigen-related cell adhesion mole... 50 2e-06
>gi|121114300 carcinoembryonic antigen-related cell adhesion
molecule 3 precursor [Homo sapiens]
Length = 252
Score = 506 bits (1303), Expect = e-144
Identities = 252/252 (100%), Positives = 252/252 (100%)
Query: 1 MGPPSASPHRECIPWQGLLLTASLLNFWNPPTTAKLTIESMPLSVAEGKEVLLLVHNLPQ 60
MGPPSASPHRECIPWQGLLLTASLLNFWNPPTTAKLTIESMPLSVAEGKEVLLLVHNLPQ
Sbjct: 1 MGPPSASPHRECIPWQGLLLTASLLNFWNPPTTAKLTIESMPLSVAEGKEVLLLVHNLPQ 60
Query: 61 HLFGYSWYKGERVDGNSLIVGYVIGTQQATPGAAYSGRETIYTNASLLIQNVTQNDIGFY 120
HLFGYSWYKGERVDGNSLIVGYVIGTQQATPGAAYSGRETIYTNASLLIQNVTQNDIGFY
Sbjct: 61 HLFGYSWYKGERVDGNSLIVGYVIGTQQATPGAAYSGRETIYTNASLLIQNVTQNDIGFY 120
Query: 121 TLQVIKSDLVNEEATGQFHVYQENAPGLPVGAVAGIVTGVLVGVALVAALVCFLLLAKTG 180
TLQVIKSDLVNEEATGQFHVYQENAPGLPVGAVAGIVTGVLVGVALVAALVCFLLLAKTG
Sbjct: 121 TLQVIKSDLVNEEATGQFHVYQENAPGLPVGAVAGIVTGVLVGVALVAALVCFLLLAKTG 180
Query: 181 RTSIQRDLKEQQPQALAPGRGPSHSSAFSMSPLSTAQAPLPNPRTAASIYEELLKHDTNI 240
RTSIQRDLKEQQPQALAPGRGPSHSSAFSMSPLSTAQAPLPNPRTAASIYEELLKHDTNI
Sbjct: 181 RTSIQRDLKEQQPQALAPGRGPSHSSAFSMSPLSTAQAPLPNPRTAASIYEELLKHDTNI 240
Query: 241 YCRMDHKAEVAS 252
YCRMDHKAEVAS
Sbjct: 241 YCRMDHKAEVAS 252
>gi|71143132 carcinoembryonic antigen-related cell adhesion molecule
4 [Homo sapiens]
Length = 244
Score = 318 bits (816), Expect = 2e-87
Identities = 158/252 (62%), Positives = 188/252 (74%), Gaps = 8/252 (3%)
Query: 1 MGPPSASPHRECIPWQGLLLTASLLNFWNPPTTAKLTIESMPLSVAEGKEVLLLVHNLPQ 60
MGPPSA+P PWQGLL+TASLL FW+PPTT + TIE++P S AEGK+VLLL N+ +
Sbjct: 1 MGPPSAAPRGGHRPWQGLLITASLLTFWHPPTTVQFTIEALPSSAAEGKDVLLLACNISE 60
Query: 61 HLFGYSWYKGERVDGNSLIVGYVIGTQQATPGAAYSGRETIYTNASLLIQNVTQNDIGFY 120
+ Y W+KG+ +G+ LI GY+ Q PGAAYSGRET+Y N SLL QN+T D G Y
Sbjct: 61 TIQAYYWHKGKTAEGSPLIAGYITDIQANIPGAAYSGRETVYPNGSLLFQNITLEDAGSY 120
Query: 121 TLQVIKSDLVNEEATGQFHVYQENAPGLPVGAVAGIVTGVLVGVALVAALVCFLLLAKTG 180
TL+ I + +++ATGQ HV+Q N PGLPVGAVAGIVTGVLVGVALVAALVCFLLL++TG
Sbjct: 121 TLRTINASYDSDQATGQLHVHQNNVPGLPVGAVAGIVTGVLVGVALVAALVCFLLLSRTG 180
Query: 181 RTSIQRDLKEQQPQALAPGRGPSHSSAFSMSPLSTAQAPLPNPRTAASIYEELLKHDTNI 240
R SIQRDL+EQ P A PG GPSH S FS APLP+PRTA IYEELL D NI
Sbjct: 181 RASIQRDLREQPPPASTPGHGPSHRSTFS--------APLPSPRTATPIYEELLYSDANI 232
Query: 241 YCRMDHKAEVAS 252
YC++DHKA+V S
Sbjct: 233 YCQIDHKADVVS 244
>gi|98986445 carcinoembryonic antigen-related cell adhesion molecule
5 preproprotein [Homo sapiens]
Length = 702
Score = 250 bits (638), Expect = 9e-67
Identities = 122/143 (85%), Positives = 125/143 (87%)
Query: 1 MGPPSASPHRECIPWQGLLLTASLLNFWNPPTTAKLTIESMPLSVAEGKEVLLLVHNLPQ 60
M PSA PHR CIPWQ LLLTASLL FWNPPTTAKLTIES P +VAEGKEVLLLVHNLPQ
Sbjct: 1 MESPSAPPHRWCIPWQRLLLTASLLTFWNPPTTAKLTIESTPFNVAEGKEVLLLVHNLPQ 60
Query: 61 HLFGYSWYKGERVDGNSLIVGYVIGTQQATPGAAYSGRETIYTNASLLIQNVTQNDIGFY 120
HLFGYSWYKGERVDGN I+GYVIGTQQATPG AYSGRE IY NASLLIQN+ QND GFY
Sbjct: 61 HLFGYSWYKGERVDGNRQIIGYVIGTQQATPGPAYSGREIIYPNASLLIQNIIQNDTGFY 120
Query: 121 TLQVIKSDLVNEEATGQFHVYQE 143
TL VIKSDLVNEEATGQF VY E
Sbjct: 121 TLHVIKSDLVNEEATGQFRVYPE 143
Score = 36.2 bits (82), Expect = 0.028
Identities = 25/72 (34%), Positives = 33/72 (45%), Gaps = 20/72 (27%)
Query: 107 LLIQNVTQNDIGFYTL-----------QVIKSDLVNEEATGQFHVYQENAPGLPVGAVAG 155
L I +T N+ G Y ++KS V+ T +PGL GA G
Sbjct: 640 LFIAKITPNNNGTYACFVSNLATGRNNSIVKSITVSASGT---------SPGLSAGATVG 690
Query: 156 IVTGVLVGVALV 167
I+ GVLVGVAL+
Sbjct: 691 IMIGVLVGVALI 702
>gi|40255013 carcinoembryonic antigen-related cell adhesion molecule
6 (non-specific cross reacting antigen) [Homo sapiens]
Length = 344
Score = 250 bits (638), Expect = 9e-67
Identities = 123/143 (86%), Positives = 128/143 (89%)
Query: 1 MGPPSASPHRECIPWQGLLLTASLLNFWNPPTTAKLTIESMPLSVAEGKEVLLLVHNLPQ 60
MGPPSA P R +PW+ +LLTASLL FWNPPTTAKLTIES P +VAEGKEVLLL HNLPQ
Sbjct: 1 MGPPSAPPCRLHVPWKEVLLTASLLTFWNPPTTAKLTIESTPFNVAEGKEVLLLAHNLPQ 60
Query: 61 HLFGYSWYKGERVDGNSLIVGYVIGTQQATPGAAYSGRETIYTNASLLIQNVTQNDIGFY 120
+ GYSWYKGERVDGNSLIVGYVIGTQQATPG AYSGRETIY NASLLIQNVTQND GFY
Sbjct: 61 NRIGYSWYKGERVDGNSLIVGYVIGTQQATPGPAYSGRETIYPNASLLIQNVTQNDTGFY 120
Query: 121 TLQVIKSDLVNEEATGQFHVYQE 143
TLQVIKSDLVNEEATGQFHVY E
Sbjct: 121 TLQVIKSDLVNEEATGQFHVYPE 143
Score = 33.1 bits (74), Expect = 0.24
Identities = 22/61 (36%), Positives = 26/61 (42%)
Query: 107 LLIQNVTQNDIGFYTLQVIKSDLVNEEATGQFHVYQENAPGLPVGAVAGIVTGVLVGVAL 166
L I N+T N+ G Y Q S T +AP L A GI GVL VAL
Sbjct: 284 LFIPNITVNNSGSYMCQAHNSATGLNRTTVTMITVSGSAPVLSAVATVGITIGVLARVAL 343
Query: 167 V 167
+
Sbjct: 344 I 344
>gi|68161541 carcinoembryonic antigen-related cell adhesion molecule
1 isoform 2 precursor [Homo sapiens]
Length = 464
Score = 244 bits (624), Expect = 4e-65
Identities = 122/143 (85%), Positives = 125/143 (87%)
Query: 1 MGPPSASPHRECIPWQGLLLTASLLNFWNPPTTAKLTIESMPLSVAEGKEVLLLVHNLPQ 60
MG SA HR +PWQGLLLTASLL FWNPPTTA+LT ESMP +VAEGKEVLLLVHNLPQ
Sbjct: 1 MGHLSAPLHRVRVPWQGLLLTASLLTFWNPPTTAQLTTESMPFNVAEGKEVLLLVHNLPQ 60
Query: 61 HLFGYSWYKGERVDGNSLIVGYVIGTQQATPGAAYSGRETIYTNASLLIQNVTQNDIGFY 120
LFGYSWYKGERVDGN IVGY IGTQQATPG A SGRETIY NASLLIQNVTQND GFY
Sbjct: 61 QLFGYSWYKGERVDGNRQIVGYAIGTQQATPGPANSGRETIYPNASLLIQNVTQNDTGFY 120
Query: 121 TLQVIKSDLVNEEATGQFHVYQE 143
TLQVIKSDLVNEEATGQFHVY E
Sbjct: 121 TLQVIKSDLVNEEATGQFHVYPE 143
Score = 47.0 bits (110), Expect = 2e-05
Identities = 33/81 (40%), Positives = 41/81 (50%), Gaps = 4/81 (4%)
Query: 104 NASLLIQNVTQNDIGFYTLQVIKSDLVNEEATGQFHVYQENAP---GLPVGAVAGIVTGV 160
N +L I V + D G Y +V N+ +V P GL GA+AGIV GV
Sbjct: 378 NTTLSINPVKREDAGTYWCEVFNPISKNQSDPIMLNVNYNALPQENGLSPGAIAGIVIGV 437
Query: 161 LVGVALVA-ALVCFLLLAKTG 180
+ VAL+A AL CFL KTG
Sbjct: 438 VALVALIAVALACFLHFGKTG 458
>gi|19923195 carcinoembryonic antigen-related cell adhesion molecule
1 isoform 1 precursor [Homo sapiens]
Length = 526
Score = 244 bits (624), Expect = 4e-65
Identities = 122/143 (85%), Positives = 125/143 (87%)
Query: 1 MGPPSASPHRECIPWQGLLLTASLLNFWNPPTTAKLTIESMPLSVAEGKEVLLLVHNLPQ 60
MG SA HR +PWQGLLLTASLL FWNPPTTA+LT ESMP +VAEGKEVLLLVHNLPQ
Sbjct: 1 MGHLSAPLHRVRVPWQGLLLTASLLTFWNPPTTAQLTTESMPFNVAEGKEVLLLVHNLPQ 60
Query: 61 HLFGYSWYKGERVDGNSLIVGYVIGTQQATPGAAYSGRETIYTNASLLIQNVTQNDIGFY 120
LFGYSWYKGERVDGN IVGY IGTQQATPG A SGRETIY NASLLIQNVTQND GFY
Sbjct: 61 QLFGYSWYKGERVDGNRQIVGYAIGTQQATPGPANSGRETIYPNASLLIQNVTQNDTGFY 120
Query: 121 TLQVIKSDLVNEEATGQFHVYQE 143
TLQVIKSDLVNEEATGQFHVY E
Sbjct: 121 TLQVIKSDLVNEEATGQFHVYPE 143
Score = 62.8 bits (151), Expect = 3e-10
Identities = 52/148 (35%), Positives = 70/148 (47%), Gaps = 16/148 (10%)
Query: 104 NASLLIQNVTQNDIGFYTLQVIKSDLVNEEATGQFHVYQENAP---GLPVGAVAGIVTGV 160
N +L I V + D G Y +V N+ +V P GL GA+AGIV GV
Sbjct: 378 NTTLSINPVKREDAGTYWCEVFNPISKNQSDPIMLNVNYNALPQENGLSPGAIAGIVIGV 437
Query: 161 LVGVALVA-ALVCFLLLAKTGRTSIQRDLKEQQPQALAPGRGPSHSSAFSMSPLSTA--- 216
+ VAL+A AL CFL KTGR S QRDL E +P + S+ M+ ++ +
Sbjct: 438 VALVALIAVALACFLHFGKTGRASDQRDLTEHKPSVSNHTQDHSNDPPNKMNEVTYSTLN 497
Query: 217 -QAPLPNPRTAAS--------IYEELLK 235
+A P T+AS IY E+ K
Sbjct: 498 FEAQQPTQPTSASPSLTATEIIYSEVKK 525
>gi|21314600 carcinoembryonic antigen-related cell adhesion molecule
8 [Homo sapiens]
Length = 349
Score = 202 bits (514), Expect = 2e-52
Identities = 101/143 (70%), Positives = 114/143 (79%)
Query: 1 MGPPSASPHRECIPWQGLLLTASLLNFWNPPTTAKLTIESMPLSVAEGKEVLLLVHNLPQ 60
MGP SA R IPWQGLLLTASL FWNPPTTA+LTIE++P + AEGKEVLLLVHNLPQ
Sbjct: 1 MGPISAPSCRWRIPWQGLLLTASLFTFWNPPTTAQLTIEAVPSNAAEGKEVLLLVHNLPQ 60
Query: 61 HLFGYSWYKGERVDGNSLIVGYVIGTQQATPGAAYSGRETIYTNASLLIQNVTQNDIGFY 120
GY+WYKGE VD N I+GYVI QQ TPG AYS RETIY NASLL++NVT+ND G Y
Sbjct: 61 DPRGYNWYKGETVDANRRIIGYVISNQQITPGPAYSNRETIYPNASLLMRNVTRNDTGSY 120
Query: 121 TLQVIKSDLVNEEATGQFHVYQE 143
TLQVIK +L++EE TGQF V+ E
Sbjct: 121 TLQVIKLNLMSEEVTGQFSVHPE 143
Score = 29.6 bits (65), Expect = 2.6
Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 5/66 (7%)
Query: 107 LLIQNVTQNDIGFYTLQVIKSDLVNEEATGQF-----HVYQENAPGLPVGAVAGIVTGVL 161
L I N+T + G Y S T + + Q ++PGL A I+ GVL
Sbjct: 284 LFIPNITTKNSGSYACHTTNSATGRNRTTVRMITVSDALVQGSSPGLSARATVSIMIGVL 343
Query: 162 VGVALV 167
VAL+
Sbjct: 344 ARVALI 349
>gi|5901930 carcinoembryonic antigen-related cell adhesion molecule
7 [Homo sapiens]
Length = 265
Score = 194 bits (492), Expect = 8e-50
Identities = 94/144 (65%), Positives = 113/144 (78%), Gaps = 1/144 (0%)
Query: 1 MGPPSASPHRECIPWQGLLLTASLLNFWNPPTTAKLTIESMPLSVAEGKEVLLLVHNLPQ 60
MG PSA P+R CIPWQGLLLTASLL FWN P +A+ I+ +P +VAEGKEVLL+VHN Q
Sbjct: 1 MGSPSACPYRVCIPWQGLLLTASLLTFWNLPNSAQTNIDVVPFNVAEGKEVLLVVHNESQ 60
Query: 61 HLFGYSWYKGERVDGNSLIVGYVIG-TQQATPGAAYSGRETIYTNASLLIQNVTQNDIGF 119
+L+GY+WYKGERV N I+GYV +Q+ PG A++GRETIY N +LLIQNVT ND GF
Sbjct: 61 NLYGYNWYKGERVHANYRIIGYVKNISQENAPGPAHNGRETIYPNGTLLIQNVTHNDAGF 120
Query: 120 YTLQVIKSDLVNEEATGQFHVYQE 143
YTL VIK +LVNEE T QF+V+ E
Sbjct: 121 YTLHVIKENLVNEEVTRQFYVFSE 144
Score = 38.9 bits (89), Expect = 0.004
Identities = 41/155 (26%), Positives = 67/155 (43%), Gaps = 31/155 (20%)
Query: 20 LTASLLNFWNPPTTAKLTIESMPLSVAEGKEVLLLVHNLPQHLFGYSWYKGERVDGNSLI 79
+T F PP K +I S + E K++++L Y W+ V+ SL+
Sbjct: 135 VTRQFYVFSEPP---KPSITSNNFNPVENKDIVVLTCQPETQNTTYLWW----VNNQSLL 187
Query: 80 VGYVIGTQQATPGAAYSGRETIYT-NASLLIQNVTQNDIGFYTLQV------IKSDLVNE 132
V S R + T N +L++ + T+NDIG Y ++ +SD V
Sbjct: 188 V---------------SPRLLLSTDNRTLVLLSATKNDIGPYECEIQNPVGASRSDPVTL 232
Query: 133 EATGQFHVYQENAPGLPVGAVAGIVTGVLVGVALV 167
++ Q ++P L G I+ GVL G+AL+
Sbjct: 233 NV--RYESVQASSPDLSAGTAVSIMIGVLAGMALI 265
>gi|52317156 carcinoembryonic antigen-related cell adhesion molecule
isoform 2 [Homo sapiens]
Length = 292
Score = 167 bits (422), Expect = 1e-41
Identities = 85/145 (58%), Positives = 97/145 (66%)
Query: 1 MGPPSASPHRECIPWQGLLLTASLLNFWNPPTTAKLTIESMPLSVAEGKEVLLLVHNLPQ 60
MGPPSA PHRECIPWQGLLLTASLL FWN PTTA L I S P VAEG+ V L V LP+
Sbjct: 1 MGPPSACPHRECIPWQGLLLTASLLTFWNAPTTAWLFIASAPFEVAEGENVHLSVVYLPE 60
Query: 61 HLFGYSWYKGERVDGNSLIVGYVIGTQQATPGAAYSGRETIYTNASLLIQNVTQNDIGFY 120
+L+ Y WYKG+ V+ N LI YVI T TPG AYSGRETI + L QNVT D G+Y
Sbjct: 61 NLYSYGWYKGKTVEPNQLIAAYVIDTHVRTPGPAYSGRETISPSGDLHFQNVTLEDTGYY 120
Query: 121 TLQVIKSDLVNEEATGQFHVYQENA 145
LQV + E+A+ VY+ A
Sbjct: 121 NLQVTYRNSQIEQASHHLRVYESVA 145
Score = 75.9 bits (185), Expect = 3e-14
Identities = 48/103 (46%), Positives = 54/103 (52%), Gaps = 8/103 (7%)
Query: 104 NASLLIQNVTQNDIGFYTLQVIKSDLVNEEATGQFHVYQENAPGLPVGAVAGIVTGVLVG 163
N L I + Q D G Y +V N + V +N GI+ GVLVG
Sbjct: 196 NHVLTIDPIRQEDAGEYQCEVSNPVSSNRSDPLKLTVKYDNT--------LGILIGVLVG 247
Query: 164 VALVAALVCFLLLAKTGRTSIQRDLKEQQPQALAPGRGPSHSS 206
LVAALVCFLLL KTGR S Q D +EQQP A PG GPS SS
Sbjct: 248 SLLVAALVCFLLLRKTGRASDQSDFREQQPPASTPGHGPSDSS 290
>gi|148612793 carcinoembryonic antigen-related cell adhesion
molecule isoform 1 [Homo sapiens]
Length = 293
Score = 167 bits (422), Expect = 1e-41
Identities = 85/145 (58%), Positives = 97/145 (66%)
Query: 1 MGPPSASPHRECIPWQGLLLTASLLNFWNPPTTAKLTIESMPLSVAEGKEVLLLVHNLPQ 60
MGPPSA PHRECIPWQGLLLTASLL FWN PTTA L I S P VAEG+ V L V LP+
Sbjct: 1 MGPPSACPHRECIPWQGLLLTASLLTFWNAPTTAWLFIASAPFEVAEGENVHLSVVYLPE 60
Query: 61 HLFGYSWYKGERVDGNSLIVGYVIGTQQATPGAAYSGRETIYTNASLLIQNVTQNDIGFY 120
+L+ Y WYKG+ V+ N LI YVI T TPG AYSGRETI + L QNVT D G+Y
Sbjct: 61 NLYSYGWYKGKTVEPNQLIAAYVIDTHVRTPGPAYSGRETISPSGDLHFQNVTLEDTGYY 120
Query: 121 TLQVIKSDLVNEEATGQFHVYQENA 145
LQV + E+A+ VY+ A
Sbjct: 121 NLQVTYRNSQIEQASHHLRVYESVA 145
Score = 73.9 bits (180), Expect = 1e-13
Identities = 47/103 (45%), Positives = 54/103 (52%), Gaps = 7/103 (6%)
Query: 104 NASLLIQNVTQNDIGFYTLQVIKSDLVNEEATGQFHVYQENAPGLPVGAVAGIVTGVLVG 163
N L I + Q D G Y +V N + V ++ GI+ GVLVG
Sbjct: 196 NHVLTIDPIRQEDAGEYQCEVSNPVSSNRSDPLKLTVKSDDN-------TLGILIGVLVG 248
Query: 164 VALVAALVCFLLLAKTGRTSIQRDLKEQQPQALAPGRGPSHSS 206
LVAALVCFLLL KTGR S Q D +EQQP A PG GPS SS
Sbjct: 249 SLLVAALVCFLLLRKTGRASDQSDFREQQPPASTPGHGPSDSS 291
>gi|157805480 pregnancy specific beta-1-glycoprotein 7 precursor
[Homo sapiens]
Length = 419
Score = 166 bits (421), Expect = 1e-41
Identities = 84/138 (60%), Positives = 100/138 (72%)
Query: 1 MGPPSASPHRECIPWQGLLLTASLLNFWNPPTTAKLTIESMPLSVAEGKEVLLLVHNLPQ 60
MGP SA P + I W+GLLLTASLLNFWNPPTTA++TIE+ P V+EGK+VLLLVHNLPQ
Sbjct: 1 MGPLSAPPCTQHITWKGLLLTASLLNFWNPPTTAQVTIEAQPPKVSEGKDVLLLVHNLPQ 60
Query: 61 HLFGYSWYKGERVDGNSLIVGYVIGTQQATPGAAYSGRETIYTNASLLIQNVTQNDIGFY 120
+L GY WYKG+ D + Y++ Q G AYSGRET+Y+NASLLIQNVTQ D G Y
Sbjct: 61 NLTGYIWYKGQIRDLYHYVTSYIVDGQIIKYGPAYSGRETVYSNASLLIQNVTQEDTGSY 120
Query: 121 TLQVIKSDLVNEEATGQF 138
TL +IK TG+F
Sbjct: 121 TLHIIKRGDGTGGVTGRF 138
>gi|194328710 pregnancy specific beta-1-glycoprotein 8 isoform b
[Homo sapiens]
Length = 419
Score = 166 bits (419), Expect = 2e-41
Identities = 86/138 (62%), Positives = 98/138 (71%)
Query: 1 MGPPSASPHRECIPWQGLLLTASLLNFWNPPTTAKLTIESMPLSVAEGKEVLLLVHNLPQ 60
MG SA P + I W+GLLLTASLLNFWNPPTTA++TIE+ P V+EGK+VLLLVHNLPQ
Sbjct: 1 MGLLSAPPCTQRITWKGLLLTASLLNFWNPPTTAQVTIEAQPTKVSEGKDVLLLVHNLPQ 60
Query: 61 HLFGYSWYKGERVDGNSLIVGYVIGTQQATPGAAYSGRETIYTNASLLIQNVTQNDIGFY 120
+L GY WYKG+ D I YV+ Q G AYSGRETIY+NASLLIQNVTQ D G Y
Sbjct: 61 NLTGYIWYKGQIRDLYHYITSYVVDGQIIIYGPAYSGRETIYSNASLLIQNVTQEDAGSY 120
Query: 121 TLQVIKSDLVNEEATGQF 138
TL +I N TG F
Sbjct: 121 TLHIIMGGDENRGVTGHF 138
>gi|51510887 pregnancy specific beta-1-glycoprotein 8 isoform a
[Homo sapiens]
Length = 426
Score = 166 bits (419), Expect = 2e-41
Identities = 86/138 (62%), Positives = 98/138 (71%)
Query: 1 MGPPSASPHRECIPWQGLLLTASLLNFWNPPTTAKLTIESMPLSVAEGKEVLLLVHNLPQ 60
MG SA P + I W+GLLLTASLLNFWNPPTTA++TIE+ P V+EGK+VLLLVHNLPQ
Sbjct: 1 MGLLSAPPCTQRITWKGLLLTASLLNFWNPPTTAQVTIEAQPTKVSEGKDVLLLVHNLPQ 60
Query: 61 HLFGYSWYKGERVDGNSLIVGYVIGTQQATPGAAYSGRETIYTNASLLIQNVTQNDIGFY 120
+L GY WYKG+ D I YV+ Q G AYSGRETIY+NASLLIQNVTQ D G Y
Sbjct: 61 NLTGYIWYKGQIRDLYHYITSYVVDGQIIIYGPAYSGRETIYSNASLLIQNVTQEDAGSY 120
Query: 121 TLQVIKSDLVNEEATGQF 138
TL +I N TG F
Sbjct: 121 TLHIIMGGDENRGVTGHF 138
>gi|47419900 pregnancy specific beta-1-glycoprotein 4 isoform 2
[Homo sapiens]
Length = 326
Score = 163 bits (412), Expect = 2e-40
Identities = 83/138 (60%), Positives = 98/138 (71%)
Query: 1 MGPPSASPHRECIPWQGLLLTASLLNFWNPPTTAKLTIESMPLSVAEGKEVLLLVHNLPQ 60
MGP SA P + I W+G+LLTASLLNFWNPPTTA++TIE+ P V+EGK+VLLLVHNLPQ
Sbjct: 1 MGPLSAPPCTQRITWKGVLLTASLLNFWNPPTTAQVTIEAQPPKVSEGKDVLLLVHNLPQ 60
Query: 61 HLFGYSWYKGERVDGNSLIVGYVIGTQQATPGAAYSGRETIYTNASLLIQNVTQNDIGFY 120
+L GY WYKG+ I YV+ Q+ G AYSGRE +Y+NASLLIQNVTQ D G Y
Sbjct: 61 NLAGYIWYKGQMTYLYHYITSYVVDGQRIIYGPAYSGRERVYSNASLLIQNVTQEDAGSY 120
Query: 121 TLQVIKSDLVNEEATGQF 138
TL +IK TG F
Sbjct: 121 TLHIIKRRDGTGGVTGHF 138
>gi|42560235 pregnancy specific beta-1-glycoprotein 4 isoform 1
[Homo sapiens]
Length = 419
Score = 163 bits (412), Expect = 2e-40
Identities = 83/138 (60%), Positives = 98/138 (71%)
Query: 1 MGPPSASPHRECIPWQGLLLTASLLNFWNPPTTAKLTIESMPLSVAEGKEVLLLVHNLPQ 60
MGP SA P + I W+G+LLTASLLNFWNPPTTA++TIE+ P V+EGK+VLLLVHNLPQ
Sbjct: 1 MGPLSAPPCTQRITWKGVLLTASLLNFWNPPTTAQVTIEAQPPKVSEGKDVLLLVHNLPQ 60
Query: 61 HLFGYSWYKGERVDGNSLIVGYVIGTQQATPGAAYSGRETIYTNASLLIQNVTQNDIGFY 120
+L GY WYKG+ I YV+ Q+ G AYSGRE +Y+NASLLIQNVTQ D G Y
Sbjct: 61 NLAGYIWYKGQMTYLYHYITSYVVDGQRIIYGPAYSGRERVYSNASLLIQNVTQEDAGSY 120
Query: 121 TLQVIKSDLVNEEATGQF 138
TL +IK TG F
Sbjct: 121 TLHIIKRRDGTGGVTGHF 138
>gi|21361392 pregnancy specific beta-1-glycoprotein 1 [Homo sapiens]
Length = 426
Score = 160 bits (406), Expect = 8e-40
Identities = 83/138 (60%), Positives = 98/138 (71%)
Query: 1 MGPPSASPHRECIPWQGLLLTASLLNFWNPPTTAKLTIESMPLSVAEGKEVLLLVHNLPQ 60
MG SA P + I W+GLLLTASLLNFWN PTTA++TIE+ P V+EGK+VLLLVHNLPQ
Sbjct: 1 MGTLSAPPCTQRIKWKGLLLTASLLNFWNLPTTAQVTIEAEPTKVSEGKDVLLLVHNLPQ 60
Query: 61 HLFGYSWYKGERVDGNSLIVGYVIGTQQATPGAAYSGRETIYTNASLLIQNVTQNDIGFY 120
+L GY WYKG+ D I YV+ + G AYSGRET Y+NASLLIQNVT+ D G Y
Sbjct: 61 NLTGYIWYKGQMRDLYHYITSYVVDGEIIIYGPAYSGRETAYSNASLLIQNVTREDAGSY 120
Query: 121 TLQVIKSDLVNEEATGQF 138
TL +IK D TG+F
Sbjct: 121 TLHIIKGDDGTRGVTGRF 138
>gi|156616284 pregnancy specific beta-1-glycoprotein 9 [Homo
sapiens]
Length = 426
Score = 160 bits (406), Expect = 8e-40
Identities = 82/134 (61%), Positives = 98/134 (73%), Gaps = 1/134 (0%)
Query: 1 MGPPSASPHRECIPWQGLLLTASLLNFWNPPTTAKLTIESMPLSVAEGKEVLLLVHNLPQ 60
MGP A + I W+GLLLTASLLNFWNPPTTA++TIE+ P V+EGK+VLLLVHNLPQ
Sbjct: 1 MGPLPAPSCTQRITWKGLLLTASLLNFWNPPTTAEVTIEAQPPKVSEGKDVLLLVHNLPQ 60
Query: 61 HLFGYSWYKGERVDGNSLIVGYVIGTQQATPGAAYSGRETIYTNASLLIQNVTQNDIGFY 120
+L GY WYKGE D I+ Y++ + G AYSGRET+Y+NASLLIQNVT+ D G Y
Sbjct: 61 NLPGYFWYKGEMTDLYHYIISYIVDGKIIIYGPAYSGRETVYSNASLLIQNVTRKDAGTY 120
Query: 121 TLQVIK-SDLVNEE 133
TL +IK D EE
Sbjct: 121 TLHIIKRGDETREE 134
>gi|194097369 pregnancy specific beta-1-glycoprotein 5 [Homo
sapiens]
Length = 335
Score = 160 bits (406), Expect = 8e-40
Identities = 82/138 (59%), Positives = 99/138 (71%)
Query: 1 MGPPSASPHRECIPWQGLLLTASLLNFWNPPTTAKLTIESMPLSVAEGKEVLLLVHNLPQ 60
MGP SA P + I W+GLLLTASLLNFWN P TA++TIE++P V+EGK+VLLLVHNLPQ
Sbjct: 1 MGPLSAPPCTQHITWKGLLLTASLLNFWNLPITAQVTIEALPPKVSEGKDVLLLVHNLPQ 60
Query: 61 HLFGYSWYKGERVDGNSLIVGYVIGTQQATPGAAYSGRETIYTNASLLIQNVTQNDIGFY 120
+L GY WYKG+ +D I YV+ Q G AY+GRET+Y+NASLLIQNVT+ D G Y
Sbjct: 61 NLAGYIWYKGQLMDLYHYITSYVVDGQINIYGPAYTGRETVYSNASLLIQNVTREDAGSY 120
Query: 121 TLQVIKSDLVNEEATGQF 138
TL +IK TG F
Sbjct: 121 TLHIIKRGDRTRGVTGYF 138
>gi|194097367 pregnancy specific beta-1-glycoprotein 5 [Homo
sapiens]
Length = 335
Score = 160 bits (406), Expect = 8e-40
Identities = 82/138 (59%), Positives = 99/138 (71%)
Query: 1 MGPPSASPHRECIPWQGLLLTASLLNFWNPPTTAKLTIESMPLSVAEGKEVLLLVHNLPQ 60
MGP SA P + I W+GLLLTASLLNFWN P TA++TIE++P V+EGK+VLLLVHNLPQ
Sbjct: 1 MGPLSAPPCTQHITWKGLLLTASLLNFWNLPITAQVTIEALPPKVSEGKDVLLLVHNLPQ 60
Query: 61 HLFGYSWYKGERVDGNSLIVGYVIGTQQATPGAAYSGRETIYTNASLLIQNVTQNDIGFY 120
+L GY WYKG+ +D I YV+ Q G AY+GRET+Y+NASLLIQNVT+ D G Y
Sbjct: 61 NLAGYIWYKGQLMDLYHYITSYVVDGQINIYGPAYTGRETVYSNASLLIQNVTREDAGSY 120
Query: 121 TLQVIKSDLVNEEATGQF 138
TL +IK TG F
Sbjct: 121 TLHIIKRGDRTRGVTGYF 138
>gi|156616282 pregnancy specific beta-1-glycoprotein 2 [Homo
sapiens]
Length = 335
Score = 160 bits (405), Expect = 1e-39
Identities = 84/138 (60%), Positives = 97/138 (70%)
Query: 1 MGPPSASPHRECIPWQGLLLTASLLNFWNPPTTAKLTIESMPLSVAEGKEVLLLVHNLPQ 60
MGP SA P E I W+GLL+TASLLNFWN PTTA++TIE+ P V+EGK+VLLLVHNLPQ
Sbjct: 1 MGPLSAPPCTEHIKWKGLLVTASLLNFWNLPTTAQVTIEAQPPKVSEGKDVLLLVHNLPQ 60
Query: 61 HLFGYSWYKGERVDGNSLIVGYVIGTQQATPGAAYSGRETIYTNASLLIQNVTQNDIGFY 120
+L GY WYKG+ D I YV+ Q G AYSGRET Y+NASLLIQNVT+ D G Y
Sbjct: 61 NLTGYIWYKGQIRDLYHYITSYVVDGQIIIYGPAYSGRETAYSNASLLIQNVTREDAGSY 120
Query: 121 TLQVIKSDLVNEEATGQF 138
TL +IK TG F
Sbjct: 121 TLHIIKRGDGTRGVTGYF 138
>gi|4506175 pregnancy specific beta-1-glycoprotein 6 isoform a [Homo
sapiens]
Length = 435
Score = 159 bits (401), Expect = 3e-39
Identities = 85/140 (60%), Positives = 98/140 (70%), Gaps = 1/140 (0%)
Query: 1 MGPPSASPHRECIPWQGLLLTASLLNFWNPPTTAKLTIESMPLSVAEGKEVLLLVHNLPQ 60
MGP SA P + I W+GLLLTASLLNFWN PTTA++ IE+ P V+EGK+VLLLVHNLPQ
Sbjct: 1 MGPLSAPPCTQHITWKGLLLTASLLNFWNLPTTAQVIIEAKPPKVSEGKDVLLLVHNLPQ 60
Query: 61 HLFGYSWYKGERVDGNSLIVGYVIGTQQATPGAAYSGRETIYTNASLLIQNVTQNDIGFY 120
+L GY WYKG+ D I YV+ Q G AYSGRET+Y+NASLLIQNVTQ D G Y
Sbjct: 61 NLTGYIWYKGQMTDLYHYITSYVV-HGQIIYGPAYSGRETVYSNASLLIQNVTQEDAGSY 119
Query: 121 TLQVIKSDLVNEEATGQFHV 140
TL +IK TG F V
Sbjct: 120 TLHIIKRGDGTGGVTGYFTV 139
>gi|73661174 pregnancy specific beta-1-glycoprotein 6 isoform b
[Homo sapiens]
Length = 424
Score = 159 bits (401), Expect = 3e-39
Identities = 85/140 (60%), Positives = 98/140 (70%), Gaps = 1/140 (0%)
Query: 1 MGPPSASPHRECIPWQGLLLTASLLNFWNPPTTAKLTIESMPLSVAEGKEVLLLVHNLPQ 60
MGP SA P + I W+GLLLTASLLNFWN PTTA++ IE+ P V+EGK+VLLLVHNLPQ
Sbjct: 1 MGPLSAPPCTQHITWKGLLLTASLLNFWNLPTTAQVIIEAKPPKVSEGKDVLLLVHNLPQ 60
Query: 61 HLFGYSWYKGERVDGNSLIVGYVIGTQQATPGAAYSGRETIYTNASLLIQNVTQNDIGFY 120
+L GY WYKG+ D I YV+ Q G AYSGRET+Y+NASLLIQNVTQ D G Y
Sbjct: 61 NLTGYIWYKGQMTDLYHYITSYVV-HGQIIYGPAYSGRETVYSNASLLIQNVTQEDAGSY 119
Query: 121 TLQVIKSDLVNEEATGQFHV 140
TL +IK TG F V
Sbjct: 120 TLHIIKRGDGTGGVTGYFTV 139
>gi|109240546 pregnancy specific beta-1-glycoprotein 3 [Homo
sapiens]
Length = 428
Score = 159 bits (401), Expect = 3e-39
Identities = 81/138 (58%), Positives = 97/138 (70%)
Query: 1 MGPPSASPHRECIPWQGLLLTASLLNFWNPPTTAKLTIESMPLSVAEGKEVLLLVHNLPQ 60
MGP SA P + I W+GLLLTA LLNFWN PTTA++TIE+ P V++GK+VLLLVHNLPQ
Sbjct: 1 MGPLSAPPCTQRITWKGLLLTALLLNFWNLPTTAQVTIEAEPTKVSKGKDVLLLVHNLPQ 60
Query: 61 HLFGYSWYKGERVDGNSLIVGYVIGTQQATPGAAYSGRETIYTNASLLIQNVTQNDIGFY 120
+L GY WYKG+ D I YV+ Q G AYSGRET+Y+NASLLIQNVT+ D G Y
Sbjct: 61 NLAGYIWYKGQMKDLYHYITSYVVDGQIIIYGPAYSGRETVYSNASLLIQNVTREDAGSY 120
Query: 121 TLQVIKSDLVNEEATGQF 138
TL ++K TG F
Sbjct: 121 TLHIVKRGDGTRGETGHF 138
>gi|164663836 pregnancy specific beta-1-glycoprotein 11 isoform 1
[Homo sapiens]
Length = 335
Score = 158 bits (400), Expect = 4e-39
Identities = 83/138 (60%), Positives = 96/138 (69%)
Query: 1 MGPPSASPHRECIPWQGLLLTASLLNFWNPPTTAKLTIESMPLSVAEGKEVLLLVHNLPQ 60
MGP SA P E I W+GLLLTA LLNFWN PTTA++ IE+ P V+EGK+VLLLVHNLPQ
Sbjct: 1 MGPLSAPPCTEHIKWKGLLLTALLLNFWNLPTTAQVMIEAQPPKVSEGKDVLLLVHNLPQ 60
Query: 61 HLFGYSWYKGERVDGNSLIVGYVIGTQQATPGAAYSGRETIYTNASLLIQNVTQNDIGFY 120
+L GY WYKG+ D I YV+ Q G AYSGRET+Y+NASLLIQNVT+ D G Y
Sbjct: 61 NLTGYIWYKGQIRDLYHYITSYVVDGQIIIYGPAYSGRETVYSNASLLIQNVTREDAGSY 120
Query: 121 TLQVIKSDLVNEEATGQF 138
TL +IK TG F
Sbjct: 121 TLHIIKRGDGTRGVTGYF 138
>gi|85861202 carcinoembryonic antigen-related cell adhesion molecule
16 [Homo sapiens]
Length = 484
Score = 79.3 bits (194), Expect = 3e-15
Identities = 44/125 (35%), Positives = 63/125 (50%), Gaps = 5/125 (4%)
Query: 18 LLLTASLLNFWNPPTTAKLTIESMPLSVAEGKEVLLLVHNLPQHLFGYSWYKGERVDGNS 77
LLL+A+ LN A+++I P +EG V L+VH L L YSWY G + +
Sbjct: 68 LLLSATFLN-----VGAEISITLEPAQPSEGDNVTLVVHGLSGELLAYSWYAGPTLSVSY 122
Query: 78 LIVGYVIGTQQATPGAAYSGRETIYTNASLLIQNVTQNDIGFYTLQVIKSDLVNEEATGQ 137
L+ Y++ T TPG A++GRE + + SL IQ + G Y LQ L E G
Sbjct: 123 LVASYIVSTGDETPGPAHTGREAVRPDGSLDIQGILPRHSGTYILQTFNRQLQTEVGYGH 182
Query: 138 FHVYQ 142
V++
Sbjct: 183 VQVHE 187
Score = 60.5 bits (145), Expect = 1e-09
Identities = 33/88 (37%), Positives = 48/88 (54%), Gaps = 2/88 (2%)
Query: 38 IESMPLSVAEGKEVLLLVHNLPQHLFGYSWYKGERVDGNSLIVGYVIGTQQATPGAAYSG 97
I +P EG++V L V P+ L Y+WY+G + N L+ GT A G A++G
Sbjct: 380 IVPVPTKPTEGQDVTLTVQGYPKDLLVYAWYRGPASEPNRLLSQLPSGTWIA--GPAHTG 437
Query: 98 RETIYTNASLLIQNVTQNDIGFYTLQVI 125
RE + N SLL+Q + D G YTL+ +
Sbjct: 438 REVGFPNCSLLVQKLNLTDTGRYTLKTV 465
>gi|189217881 carcinoembryonic antigen-related cell adhesion
molecule 19 isoform 1 [Homo sapiens]
Length = 299
Score = 65.5 bits (158), Expect = 4e-11
Identities = 56/217 (25%), Positives = 103/217 (47%), Gaps = 25/217 (11%)
Query: 16 QGLLLTASLLNFWN-PPTTAKLTIESMPLSVAEGKEVLLLVHNLPQHLFGYSWYKGERVD 74
+ LLL+AS+L W + A L I+ +P + +++LL V +P ++WY GE
Sbjct: 13 KSLLLSASILVLWMLQGSQAALYIQKIPEQPQKNQDLLLSVQGVPDTFQDFNWYLGEETY 72
Query: 75 GNSLIVGYVIGTQQATPGAAYSGRETI--YTNASLLIQNVTQNDIGFYTLQVIKSDLVNE 132
G + + Y+ G Q+ + G+ I + N S+L++ D G Y + + +
Sbjct: 73 GGTRLFTYIPGIQRPQRDGSAMGQRDIVGFPNGSMLLRRAQPTDSGTYQVAITINSEWTM 132
Query: 133 EATGQFHVYQEN----APGLP--VGAVAGIVTGVLVGVALVAALVCFLLLAKTGRTSIQR 186
+A + V ++N + LP G +A + G L AL+ + + +LL + R
Sbjct: 133 KAKTEVQVAEKNKELPSTHLPTNAGILAATIIGSLAAGALLISCIAYLL--------VTR 184
Query: 187 DLKEQQPQALAP-GRGPSHSSAFSMSPLSTAQAPLPN 222
+ + Q + AP G+G S+S L +A +P+P+
Sbjct: 185 NWRGQSHRLPAPRGQG-------SLSILCSAVSPVPS 214
>gi|45267817 carcinoembryonic antigen-related cell adhesion molecule
19 isoform 2 [Homo sapiens]
Length = 300
Score = 65.5 bits (158), Expect = 4e-11
Identities = 56/217 (25%), Positives = 103/217 (47%), Gaps = 25/217 (11%)
Query: 16 QGLLLTASLLNFWN-PPTTAKLTIESMPLSVAEGKEVLLLVHNLPQHLFGYSWYKGERVD 74
+ LLL+AS+L W + A L I+ +P + +++LL V +P ++WY GE
Sbjct: 13 KSLLLSASILVLWMLQGSQAALYIQKIPEQPQKNQDLLLSVQGVPDTFQDFNWYLGEETY 72
Query: 75 GNSLIVGYVIGTQQATPGAAYSGRETI--YTNASLLIQNVTQNDIGFYTLQVIKSDLVNE 132
G + + Y+ G Q+ + G+ I + N S+L++ D G Y + + +
Sbjct: 73 GGTRLFTYIPGIQRPQRDGSAMGQRDIVGFPNGSMLLRRAQPTDSGTYQVAITINSEWTM 132
Query: 133 EATGQFHVYQEN----APGLP--VGAVAGIVTGVLVGVALVAALVCFLLLAKTGRTSIQR 186
+A + V ++N + LP G +A + G L AL+ + + +LL + R
Sbjct: 133 KAKTEVQVAEKNKELPSTHLPTNAGILAATIIGSLAAGALLISCIAYLL--------VTR 184
Query: 187 DLKEQQPQALAP-GRGPSHSSAFSMSPLSTAQAPLPN 222
+ + Q + AP G+G S+S L +A +P+P+
Sbjct: 185 NWRGQSHRLPAPRGQG-------SLSILCSAVSPVPS 214
>gi|122937205 carcinoembryonic antigen-related cell adhesion
molecule 18 [Homo sapiens]
Length = 398
Score = 54.7 bits (130), Expect = 8e-08
Identities = 37/128 (28%), Positives = 65/128 (50%), Gaps = 4/128 (3%)
Query: 15 WQGLLLTASLLNFWNPPTTAKLTIESMPLSVAEGKEVLLLVHNLPQHLFGYSWYKGERVD 74
W+ + L ASLL + ++ I + L + +G ++ + +P+ + YSWY G
Sbjct: 72 WRRVFLMASLLACGICQASGQIFI-TQTLGI-KGYRTVVALDKVPEDVQEYSWYWGANDS 129
Query: 75 GNSLIVGYVIGTQQATPGAAYSGRETIYTNASLLIQNVTQNDIGFYTLQVIKSDLVNEEA 134
++I+ + + Q PG Y+GRE + SLLI+ ND G YT++V+ + + A
Sbjct: 130 AGNMIISHKPPSAQQ-PGPMYTGRERVNREGSLLIRPTALNDTGNYTVRVVAGN-ETQRA 187
Query: 135 TGQFHVYQ 142
TG V +
Sbjct: 188 TGWLEVLE 195
>gi|156564390 carcinoembryonic antigen-related cell adhesion
molecule 20 4L [Homo sapiens]
Length = 503
Score = 49.7 bits (117), Expect = 2e-06
Identities = 23/60 (38%), Positives = 35/60 (58%), Gaps = 4/60 (6%)
Query: 1 MGPPSASPHRECIPWQGLLLTASLLNFWNPPTTAKLTIESMPLSVAEGKEVLLLVHNLPQ 60
MGP + H W G+LL+ASL W+PP A+LT+ + PL + ++V+L V P+
Sbjct: 1 MGPADSWGHH----WMGILLSASLCTVWSPPAAAQLTLNANPLDATQSEDVVLPVFGTPR 56
Score = 42.0 bits (97), Expect = 5e-04
Identities = 30/111 (27%), Positives = 49/111 (44%), Gaps = 2/111 (1%)
Query: 104 NASLLIQNVTQNDIGFYTLQVIKSDLVNEEATGQFHVYQENAPGLPVGAVAGIVTGVLVG 163
N +L+I + +ND G Y +V + + + L GA+AGIV G+L
Sbjct: 306 NRTLIIHGLQRNDTGPYACEVWNWGSRARSEPLELTINCPQSSSLSSGAIAGIVIGILAV 365
Query: 164 VALVAALVCFLLLAKTGRTS--IQRDLKEQQPQALAPGRGPSHSSAFSMSP 212
+A+ + L FL + R S D + Q + P+ S+ S+SP
Sbjct: 366 IAVASELGYFLYIRNARRPSRKTTEDPSHETSQPIPKEEHPTEPSSESLSP 416
>gi|156564378 carcinoembryonic antigen-related cell adhesion
molecule 20 5L [Homo sapiens]
Length = 596
Score = 49.7 bits (117), Expect = 2e-06
Identities = 23/60 (38%), Positives = 35/60 (58%), Gaps = 4/60 (6%)
Query: 1 MGPPSASPHRECIPWQGLLLTASLLNFWNPPTTAKLTIESMPLSVAEGKEVLLLVHNLPQ 60
MGP + H W G+LL+ASL W+PP A+LT+ + PL + ++V+L V P+
Sbjct: 1 MGPADSWGHH----WMGILLSASLCTVWSPPAAAQLTLNANPLDATQSEDVVLPVFGTPR 56
Score = 36.6 bits (83), Expect = 0.021
Identities = 36/134 (26%), Positives = 56/134 (41%), Gaps = 11/134 (8%)
Query: 88 QATPGAAYSGRETI------YTNASLLIQNVTQNDIGFYTLQVIKSDLVNEEATGQF-HV 140
++ PGA Y R T+ + L+I+ +T G Y S +T V
Sbjct: 378 ESKPGAEY--RWTLEHSTGEHLGEQLIIRALTWEHDGIYNCTASNSLTGLARSTSVLVKV 435
Query: 141 YQENAPGLPVGAVAGIVTGVLVGVALVAALVCFLLLAKTGRTS--IQRDLKEQQPQALAP 198
+ L GA+AGIV G+L +A+ + L FL + R S D + Q +
Sbjct: 436 VGPQSSSLSSGAIAGIVIGILAVIAVASELGYFLYIRNARRPSRKTTEDPSHETSQPIPK 495
Query: 199 GRGPSHSSAFSMSP 212
P+ S+ S+SP
Sbjct: 496 EEHPTEPSSESLSP 509
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.133 0.393
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,167,075
Number of Sequences: 37866
Number of extensions: 427017
Number of successful extensions: 2020
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 55
Number of HSP's successfully gapped in prelim test: 24
Number of HSP's that attempted gapping in prelim test: 1913
Number of HSP's gapped (non-prelim): 117
length of query: 252
length of database: 18,247,518
effective HSP length: 100
effective length of query: 152
effective length of database: 14,460,918
effective search space: 2198059536
effective search space used: 2198059536
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.