Search of human proteins with 241982802

Search of human proteins with 241982802

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|241982802 HMG box domain containing 3 [Homo sapiens]
         (1292 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|241982802 HMG box domain containing 3 [Homo sapiens]              2588   0.0  
gi|161019170 mucin 5AC [Homo sapiens]                                  47   9e-05
gi|4759162 SRY-box 14 [Homo sapiens]                                   45   4e-04
gi|149773456 hypothetical protein LOC643314 [Homo sapiens]             45   6e-04
gi|83715964 high-mobility group 20B [Homo sapiens]                     45   6e-04
gi|91982772 mucin 17 [Homo sapiens]                                    45   6e-04
gi|7662274 epidermal Langerhans cell protein LCP1 [Homo sapiens]       45   6e-04
gi|169168462 PREDICTED: similar to high mobility group box 3 [Ho...    44   8e-04
gi|169168166 PREDICTED: similar to high mobility group box 3 [Ho...    44   8e-04
gi|239742753 PREDICTED: similar to high mobility group box 3 iso...    44   8e-04
gi|113416897 PREDICTED: similar to high mobility group box 3 iso...    44   8e-04
gi|30179900 SRY (sex determining region Y)-box 1 [Homo sapiens]        44   8e-04
gi|28195386 sex-determining region Y-box 2 [Homo sapiens]              44   0.001
gi|30179903 SRY (sex determining region Y)-box 8 [Homo sapiens]        42   0.003
gi|13786123 HMG-box transcription factor TCF-3 [Homo sapiens]          42   0.003
gi|4557853 transcription factor SOX9 [Homo sapiens]                    42   0.004
gi|226246533 TOX high mobility group box family member 3 isoform...    42   0.005
gi|226054295 TOX high mobility group box family member 3 isoform...    42   0.005
gi|19923236 nuclear antigen Sp100 isoform 2 [Homo sapiens]             42   0.005
gi|224967054 SRY (sex determining region Y)-box 6 isoform 4 [Hom...    41   0.006
gi|224967050 SRY (sex determining region Y)-box 6 isoform 3 [Hom...    41   0.006
gi|70909338 SRY (sex determining region Y)-box 6 isoform 1 [Homo...    41   0.006
gi|71037389 SRY (sex determining region Y)-box 6 isoform 2 [Homo...    41   0.006
gi|197276602 microtubule-associated protein 4 isoform 5 [Homo sa...    41   0.006
gi|197276600 microtubule-associated protein 4 isoform 4 [Homo sa...    41   0.006
gi|47519675 microtubule-associated protein 4 isoform 2 [Homo sap...    41   0.006
gi|47519639 microtubule-associated protein 4 isoform 1 [Homo sap...    41   0.006
gi|7662322 thymus high mobility group box protein TOX [Homo sapi...    41   0.006
gi|71143137 high-mobility group box 3 [Homo sapiens]                   41   0.006
gi|5902106 SRY-box 15 [Homo sapiens]                                   41   0.006

>gi|241982802 HMG box domain containing 3 [Homo sapiens]
          Length = 1292

 Score = 2588 bits (6709), Expect = 0.0
 Identities = 1292/1292 (100%), Positives = 1292/1292 (100%)

Query: 1    MDASYDGTEVTVVMEEIEEAYCYTSPGPPKKKKKYKIHGEKTKKPRSAYLLYYYDIYLKV 60
            MDASYDGTEVTVVMEEIEEAYCYTSPGPPKKKKKYKIHGEKTKKPRSAYLLYYYDIYLKV
Sbjct: 1    MDASYDGTEVTVVMEEIEEAYCYTSPGPPKKKKKYKIHGEKTKKPRSAYLLYYYDIYLKV 60

Query: 61   QQELPHLPQSEINKKISESWRLLSVAERSYYLEKAKLEKEGLDPNSKLSALTAVVPDIPG 120
            QQELPHLPQSEINKKISESWRLLSVAERSYYLEKAKLEKEGLDPNSKLSALTAVVPDIPG
Sbjct: 61   QQELPHLPQSEINKKISESWRLLSVAERSYYLEKAKLEKEGLDPNSKLSALTAVVPDIPG 120

Query: 121  FRKILPRSDYIIIPKSSLQEDRSCPQLELCVAQNQMSPKGPPLVSNTAPETVPSHAGMAE 180
            FRKILPRSDYIIIPKSSLQEDRSCPQLELCVAQNQMSPKGPPLVSNTAPETVPSHAGMAE
Sbjct: 121  FRKILPRSDYIIIPKSSLQEDRSCPQLELCVAQNQMSPKGPPLVSNTAPETVPSHAGMAE 180

Query: 181  QCLAVEALAEEVGALTQSGAVQEIATSEILSQDVLLEDASLEVGESHQPYQTSLVIEETL 240
            QCLAVEALAEEVGALTQSGAVQEIATSEILSQDVLLEDASLEVGESHQPYQTSLVIEETL
Sbjct: 181  QCLAVEALAEEVGALTQSGAVQEIATSEILSQDVLLEDASLEVGESHQPYQTSLVIEETL 240

Query: 241  VNGSPDLPTGSLAVPHPQVGESVSVVTVMRDSSESSSSAPATQFIMLPLPAYSVVENPTS 300
            VNGSPDLPTGSLAVPHPQVGESVSVVTVMRDSSESSSSAPATQFIMLPLPAYSVVENPTS
Sbjct: 241  VNGSPDLPTGSLAVPHPQVGESVSVVTVMRDSSESSSSAPATQFIMLPLPAYSVVENPTS 300

Query: 301  IKLTTTYTRRGHGTCTSPGCSFTYVTRHKPPKCPTCGNFLGGKWIPKEKPAKVKVELASG 360
            IKLTTTYTRRGHGTCTSPGCSFTYVTRHKPPKCPTCGNFLGGKWIPKEKPAKVKVELASG
Sbjct: 301  IKLTTTYTRRGHGTCTSPGCSFTYVTRHKPPKCPTCGNFLGGKWIPKEKPAKVKVELASG 360

Query: 361  VSSKGSVVKRNQQPVTTEQNSSKENASKLTLENSEAVSQLLNVAPPREVGEESEWEEVII 420
            VSSKGSVVKRNQQPVTTEQNSSKENASKLTLENSEAVSQLLNVAPPREVGEESEWEEVII
Sbjct: 361  VSSKGSVVKRNQQPVTTEQNSSKENASKLTLENSEAVSQLLNVAPPREVGEESEWEEVII 420

Query: 421  SDAHVLVKEAPGNCGTAVTKTPVVKSGVQPEVTLGTTDNDSPGADVPTPSEGTSTSSPLP 480
            SDAHVLVKEAPGNCGTAVTKTPVVKSGVQPEVTLGTTDNDSPGADVPTPSEGTSTSSPLP
Sbjct: 421  SDAHVLVKEAPGNCGTAVTKTPVVKSGVQPEVTLGTTDNDSPGADVPTPSEGTSTSSPLP 480

Query: 481  APKKPTGVDLLTPGSRAPELKGRARGKPSLLAAARPMRAILPAPVNVGRGSSMGLPRARQ 540
            APKKPTGVDLLTPGSRAPELKGRARGKPSLLAAARPMRAILPAPVNVGRGSSMGLPRARQ
Sbjct: 481  APKKPTGVDLLTPGSRAPELKGRARGKPSLLAAARPMRAILPAPVNVGRGSSMGLPRARQ 540

Query: 541  AFSLSDKTPSVRTCGLKPSTLKQLGQPIQQPSGPGEVKLPSGPSNRTSQVKVVEVKPDMF 600
            AFSLSDKTPSVRTCGLKPSTLKQLGQPIQQPSGPGEVKLPSGPSNRTSQVKVVEVKPDMF
Sbjct: 541  AFSLSDKTPSVRTCGLKPSTLKQLGQPIQQPSGPGEVKLPSGPSNRTSQVKVVEVKPDMF 600

Query: 601  PPYKYSCTVTLDLGLATSRGRGKCKNPSCSYVYTNRHKPRICPSCGVNLAKDRTEKTTKA 660
            PPYKYSCTVTLDLGLATSRGRGKCKNPSCSYVYTNRHKPRICPSCGVNLAKDRTEKTTKA
Sbjct: 601  PPYKYSCTVTLDLGLATSRGRGKCKNPSCSYVYTNRHKPRICPSCGVNLAKDRTEKTTKA 660

Query: 661  IEVSSPLPDVLNATEPLSTAQREIQRQSTLQLLRKVLQIPENESELAEVFALIHELNSSR 720
            IEVSSPLPDVLNATEPLSTAQREIQRQSTLQLLRKVLQIPENESELAEVFALIHELNSSR
Sbjct: 661  IEVSSPLPDVLNATEPLSTAQREIQRQSTLQLLRKVLQIPENESELAEVFALIHELNSSR 720

Query: 721  LILSNVSEETVTIEQTSWSNYYESPSTQCLLCSSPLFKGGQNSLAGPQECWLLTASRLQT 780
            LILSNVSEETVTIEQTSWSNYYESPSTQCLLCSSPLFKGGQNSLAGPQECWLLTASRLQT
Sbjct: 721  LILSNVSEETVTIEQTSWSNYYESPSTQCLLCSSPLFKGGQNSLAGPQECWLLTASRLQT 780

Query: 781  VTAQVKMCLNPHCLALHSFIDIYTGLFNVGNKLLVSLDLLFAIRNQIKLGEDPRVSINVV 840
            VTAQVKMCLNPHCLALHSFIDIYTGLFNVGNKLLVSLDLLFAIRNQIKLGEDPRVSINVV
Sbjct: 781  VTAQVKMCLNPHCLALHSFIDIYTGLFNVGNKLLVSLDLLFAIRNQIKLGEDPRVSINVV 840

Query: 841  LKSVQEQTEKTLTSEELSQLQELLCNGYWAFECLTVRDYNDMICGICGVAPKVEMAQRSE 900
            LKSVQEQTEKTLTSEELSQLQELLCNGYWAFECLTVRDYNDMICGICGVAPKVEMAQRSE
Sbjct: 841  LKSVQEQTEKTLTSEELSQLQELLCNGYWAFECLTVRDYNDMICGICGVAPKVEMAQRSE 900

Query: 901  ENVLALKSVEFTWPEFLGSNEVNVEDFWATMETEVIEQVAFPASIPITKFDASVIAPFFP 960
            ENVLALKSVEFTWPEFLGSNEVNVEDFWATMETEVIEQVAFPASIPITKFDASVIAPFFP
Sbjct: 901  ENVLALKSVEFTWPEFLGSNEVNVEDFWATMETEVIEQVAFPASIPITKFDASVIAPFFP 960

Query: 961  PLMRGAVVVNTEKDKNLDVQPVPGSGSALVRLLQEGTCKLDEIGSYSEEKLQHLLRQCGI 1020
            PLMRGAVVVNTEKDKNLDVQPVPGSGSALVRLLQEGTCKLDEIGSYSEEKLQHLLRQCGI
Sbjct: 961  PLMRGAVVVNTEKDKNLDVQPVPGSGSALVRLLQEGTCKLDEIGSYSEEKLQHLLRQCGI 1020

Query: 1021 PFGAEDSKDQLCFSLLALYESVQNGARAIRPPRHFTGGKIYKVCPHQVVCGSKYLVRGES 1080
            PFGAEDSKDQLCFSLLALYESVQNGARAIRPPRHFTGGKIYKVCPHQVVCGSKYLVRGES
Sbjct: 1021 PFGAEDSKDQLCFSLLALYESVQNGARAIRPPRHFTGGKIYKVCPHQVVCGSKYLVRGES 1080

Query: 1081 ARDHVDLLASSRHWPPVYVVDMATSVALCADLCYPELTNQMWGRNQGCFSSPTEPPVSVS 1140
            ARDHVDLLASSRHWPPVYVVDMATSVALCADLCYPELTNQMWGRNQGCFSSPTEPPVSVS
Sbjct: 1081 ARDHVDLLASSRHWPPVYVVDMATSVALCADLCYPELTNQMWGRNQGCFSSPTEPPVSVS 1140

Query: 1141 CPELLDQHYTVDMTETEHSIQHPVTKTATRRIVHAGLQPNPGDPSAGHHSLALCPELAPY 1200
            CPELLDQHYTVDMTETEHSIQHPVTKTATRRIVHAGLQPNPGDPSAGHHSLALCPELAPY
Sbjct: 1141 CPELLDQHYTVDMTETEHSIQHPVTKTATRRIVHAGLQPNPGDPSAGHHSLALCPELAPY 1200

Query: 1201 ATILASIVDSKPNGVRQRPIAFDNATHYYLYNRLMDFLTSREIVNRQIHDIVQSCQPGEV 1260
            ATILASIVDSKPNGVRQRPIAFDNATHYYLYNRLMDFLTSREIVNRQIHDIVQSCQPGEV
Sbjct: 1201 ATILASIVDSKPNGVRQRPIAFDNATHYYLYNRLMDFLTSREIVNRQIHDIVQSCQPGEV 1260

Query: 1261 VIRDTLYRLGVAQIKTETEEEGEEEEVAAVAE 1292
            VIRDTLYRLGVAQIKTETEEEGEEEEVAAVAE
Sbjct: 1261 VIRDTLYRLGVAQIKTETEEEGEEEEVAAVAE 1292


>gi|161019170 mucin 5AC [Homo sapiens]
          Length = 6207

 Score = 47.4 bits (111), Expect = 9e-05
 Identities = 61/294 (20%), Positives = 100/294 (34%), Gaps = 30/294 (10%)

Query: 247  LPTGSLAVPHPQVGESVSVVTVMRDSSESSSSAPATQFIMLPLPAYSVVENPTSIKLTTT 306
            +P+ SL     ++ ++ +    M  S+ + SS P T              + +++  TT 
Sbjct: 4325 IPSSSLGTTWTRLSQTTTPTATM--STATPSSTPETA-------------HTSTVLTTTA 4369

Query: 307  YTRRGHGTCTSPGCSFTYVTRHKPPKCPTCGNFLGGKWIP-KEKPAKVKVELASGVSSKG 365
             T R  G+  +P  +       K P   T G  +     P   +   V +   +  ++ G
Sbjct: 4370 TTTRATGSVATPSSTPGTAHTTKVPTTTTTGFTVTPSSSPGTARTPPVWISTTTTPTTSG 4429

Query: 366  SVVKRNQQPVTTEQ-------NSSKENASKLTLENSEAVSQLLNVAPPREVGEESEWEEV 418
            S V  +  P TT          ++    S  T  +S   S   +  P       +    +
Sbjct: 4430 STVTPSSVPGTTHTPTVLTTTTTTVATGSMATPSSSTQTSGTTHTPPVPNTTATTHGRSL 4489

Query: 419  IISDAHVL----VKEAPGNCGTAVTKTPVVKSGVQPEVTLGTTDNDSPGADVPTPSEGTS 474
              S  H +         G  GT     P   +   P  T GTT + +P    P PS  T+
Sbjct: 4490 SPSSPHTVRTAWTSATSGTLGTTHITEPSTGTSHTPAATTGTTQHSTPALSSPHPSSRTT 4549

Query: 475  TSSPLPAPKKPTGVDLLTPGSRAPELKGRARGKPSLLAAARPMRAILPAPVNVG 528
             S P P    P      T  SR       ++ + S L  + P  A +   V  G
Sbjct: 4550 ESPPSPGTTTPGHT---TATSRTTATATPSKTRTSTLLPSSPTSAPITTVVTTG 4600



 Score = 43.5 bits (101), Expect = 0.001
 Identities = 68/299 (22%), Positives = 103/299 (34%), Gaps = 40/299 (13%)

Query: 247  LPTGSLAVPHPQVGESVSVVTVMRDSSESSSSAPATQFIMLPLPAYSVVENPTSIKLTTT 306
            +P+ SL     ++ ++ +    M  S+ + SS P T                TS  LTTT
Sbjct: 3178 IPSSSLGTTWTRLSQTTTPTATM--STATPSSTPETVH--------------TSTVLTTT 3221

Query: 307  YTRRGH-GTCTSPGCSFTYVTRHKPPKCPTCGNFLGGKWIPKEKPAKVK-----VELASG 360
             T  G  G+  +P  S T  T H      T     G    P   P   +     +   + 
Sbjct: 3222 ATTTGATGSVATP--SSTPGTAHTTKVLTTTTT--GFTATPSSSPGTARTLPVWISTTTT 3277

Query: 361  VSSKGSVVKRNQQPVTTEQ-------NSSKENASKLTLENSEAVSQLLNVAPPREVGEES 413
             +++GS V  +  P TT          ++    S  T  +S   S   +  P       +
Sbjct: 3278 PTTRGSTVTPSSIPGTTHTPTVLTTTTTTVATGSMATPSSSTQTSGTTHTPPVPNTTATT 3337

Query: 414  EWEEVIISDAHVL----VKEAPGNCGTAVTKTPVVKSGVQPEVTLGTTDNDSPGADVPTP 469
                +  S  H +         G  GT     P   +   P  T GTT + +P    P P
Sbjct: 3338 HGRSLSPSSPHTVRTAWTSATSGTLGTTHITEPSTGTSHTPAATTGTTQHSTPALSSPHP 3397

Query: 470  SEGTSTSSPLPAPKKPTGVDLLTPGSRAPELKGRARGKPSLLAAARPMRAILPAPVNVG 528
            S  T+ S P P    P G    T  SR       ++ + S L  + P  A +   V +G
Sbjct: 3398 SSRTTESPPSPGTTTP-GHTRAT--SRTTATATPSKTRTSTLLPSSPTSAPITTVVTMG 3453



 Score = 42.7 bits (99), Expect = 0.002
 Identities = 73/346 (21%), Positives = 111/346 (32%), Gaps = 60/346 (17%)

Query: 239  TLVNGSPDLPTGSL-AVPHPQVGESVSVVTVMRDSSESSSSAPATQFIMLPLPAYSVVEN 297
            T   GS   PT +L   P P+V  + +    +  S  + SS+P T   +  L + +    
Sbjct: 2610 TASTGSTATPTSTLRTAPPPKVLTTTATTPTVTSSKATPSSSPGTATALPALRSTATTPT 2669

Query: 298  PTSI------KLTTTYTRRGH---------------------------GTCTSPGCSFTY 324
             TS+       L TT+TR                               T T+ G + + 
Sbjct: 2670 ATSVTPIPSSSLGTTWTRLSQTTTPTATMSTATPSSTPETAHTSTVLTATATTTGATGSV 2729

Query: 325  VTRHKPP------KCPTCGNFLGGKWIPKEKPAK-----VKVELASGVSSKGSVVKRNQQ 373
             T    P      K PT     G    P   P       V +   +  +++GS V  +  
Sbjct: 2730 ATPSSTPGTAHTTKVPTTTT-TGFTATPSSSPGTALTPPVWISTTTTPTTRGSTVTPSSI 2788

Query: 374  PVTTEQ-------NSSKENASKLTLENSEAVSQLLNVAPPREVGEESEWEEVIISDAHVL 426
            P TT          ++    S  T  +S   S   +  P       +    +  S  H +
Sbjct: 2789 PGTTHTATVLTTTTTTVATGSMATPSSSTQTSGTTHTPPVPNTMATTHGRSLPPSSPHTV 2848

Query: 427  ----VKEAPGNCGTAVTKTPVVKSGVQPEVTLGTTDNDSPGADVPTPSEGTSTSSPLPAP 482
                     G  GT     P   +      T GTT + +P    P PS  T+ S P P  
Sbjct: 2849 RTAWTSATSGILGTTHITEPSTVTSHTLAATTGTTQHSTPALSSPHPSSRTTESPPSPGT 2908

Query: 483  KKPTGVDLLTPGSRAPELKGRARGKPSLLAAARPMRAILPAPVNVG 528
              P      T  SR       ++ + S L  + P  A +   V +G
Sbjct: 2909 TTPGHT---TATSRTTATATPSKTRTSTLLPSSPTSAPITTVVTMG 2951



 Score = 42.7 bits (99), Expect = 0.002
 Identities = 79/370 (21%), Positives = 123/370 (33%), Gaps = 61/370 (16%)

Query: 165  SNTAPETVPSHAGMAEQCLAVEALAEEVGALTQSGAVQEIATSEILSQDVLLEDASLEVG 224
            S TA  TVP+  G      +  A A  +  LT +     + +S            +L   
Sbjct: 3751 STTATVTVPT--GSTATASSTRATAGTLKVLTSTATTPTVISSRATPSSSPGTATALPAL 3808

Query: 225  ESHQPYQTSLVIEETLVNGSPDLPTGSLAVPHPQVGESVSVVTVMRDSSESSSSAPATQF 284
             S     T+  +          +P+ SL     ++ ++ +    M  S+ + SS P T  
Sbjct: 3809 RSTATTPTATSVTA--------IPSSSLGTAWTRLSQTTTPTATM--STATPSSTPETV- 3857

Query: 285  IMLPLPAYSVVENPTSIKLTTTYTRRGHGTCTSPGCSFTYVTRHKPPKCPTCGNFLGGKW 344
                        + +++  TTT T R  G+  +P  S T  T H   K PT     G   
Sbjct: 3858 ------------HTSTVLTTTTTTTRATGSVATP--SSTPGTAHTT-KVPTTTT-TGFTA 3901

Query: 345  IPKEKPAK-----VKVELASGVSSKGSVVKRNQQPVTTEQ-------NSSKENASKLTLE 392
             P   P       V +   +  +++GS V  +  P TT          ++    S  T  
Sbjct: 3902 TPSSSPGTALTPPVWISTTTTPTTRGSTVTPSSIPGTTHTATVLTTTTTTVATGSMATPS 3961

Query: 393  NSEAVSQLLNVAPPREVGEESEWEEVIISDAHVL----VKEAPGNCGTAVTKTPVVKSGV 448
            +S   S   +  P       +    +  S  H +         G  GT     P   +  
Sbjct: 3962 SSTQTSGTTHTPPVPNTTATTHGRSLPPSSPHTVRTAWTSATSGILGTTHITEPSTVTSH 4021

Query: 449  QPEVTLGTTDNDSPGADVPTPSEGTSTSSPLPAPKKPTGVDLLTPGSRAPELKGRARGKP 508
             P  T  TT + +P    P PS  T+ S P             +PG+  P   G  RG  
Sbjct: 4022 TPAATTSTTQHSTPALSSPHPSSRTTESPP-------------SPGTTTP---GHTRGTS 4065

Query: 509  SLLAAARPMR 518
               A A P +
Sbjct: 4066 RTTATATPSK 4075



 Score = 35.4 bits (80), Expect = 0.36
 Identities = 56/280 (20%), Positives = 86/280 (30%), Gaps = 40/280 (14%)

Query: 245  PDLP-TGSLAVPHPQVGES--------VSVVTVMRDSSESSSSAPATQFIMLPLPAYSVV 295
            P  P T S A P    G +         +  T    S+ + SS P T +I+      + V
Sbjct: 4200 PSTPATSSTATPSSTPGTTWILTKLTTTATTTESTGSTATPSSTPGTTWILTEPSTTATV 4259

Query: 296  ENPTSIKLTTTYTRRGHGT-------------------CTSPGCSFTYVTRHKPPKCPTC 336
              PT    T + T+   GT                    +SPG +            PT 
Sbjct: 4260 TVPTGSTATASSTQATAGTPHVSTTATTPTVTSSKATPFSSPGTATALPALRSTATTPTA 4319

Query: 337  GNF-------LGGKWIPKEKPAKVKVELASGVSSKGSVVKRNQQPVTTEQNSSKENASKL 389
             +F       LG  W    +       +++   S           +TT   +++   S  
Sbjct: 4320 TSFTAIPSSSLGTTWTRLSQTTTPTATMSTATPSSTPETAHTSTVLTTTATTTRATGSVA 4379

Query: 390  TLENSEAVSQLLNVAPPREVG----EESEWEEVIISDAHVLVKEAPGNCGTAVTKTPVVK 445
            T  ++   +    V      G      S           +     P   G+ VT + V  
Sbjct: 4380 TPSSTPGTAHTTKVPTTTTTGFTVTPSSSPGTARTPPVWISTTTTPTTSGSTVTPSSVPG 4439

Query: 446  SGVQPEVTLGTTDNDSPGADVPTPSEGTSTSSPLPAPKKP 485
            +   P V   TT   + G+ + TPS  T TS     P  P
Sbjct: 4440 TTHTPTVLTTTTTTVATGS-MATPSSSTQTSGTTHTPPVP 4478



 Score = 32.3 bits (72), Expect = 3.0
 Identities = 55/280 (19%), Positives = 86/280 (30%), Gaps = 40/280 (14%)

Query: 245  PDLP-TGSLAVPHPQVGES--------VSVVTVMRDSSESSSSAPATQFIMLPLPAYSVV 295
            P  P T S A+P    G +         +  T    S+ + SS P T +I+      + V
Sbjct: 3053 PSTPATSSTAMPSSTPGTTWILTELTTTATTTESTGSTATPSSTPGTTWILTEPSTTATV 3112

Query: 296  ENPTSIKLTTTYTRRGHGT-------------------CTSPGCSFTYVTRHKPPKCPTC 336
              PT    T + T+   GT                    +SPG +            PT 
Sbjct: 3113 TVPTGSTATASSTQATAGTPHVSTTATTPTVTSSKATPFSSPGTATALPALRSTATTPTA 3172

Query: 337  GNF-------LGGKWIPKEKPAKVKVELASGVSSKGSVVKRNQQPVTTEQNSSKENASKL 389
             +F       LG  W    +       +++   S           +TT   ++    S  
Sbjct: 3173 TSFTAIPSSSLGTTWTRLSQTTTPTATMSTATPSSTPETVHTSTVLTTTATTTGATGSVA 3232

Query: 390  TLENSEAVSQLLNVAPPREVG----EESEWEEVIISDAHVLVKEAPGNCGTAVTKTPVVK 445
            T  ++   +    V      G      S           +     P   G+ VT + +  
Sbjct: 3233 TPSSTPGTAHTTKVLTTTTTGFTATPSSSPGTARTLPVWISTTTTPTTRGSTVTPSSIPG 3292

Query: 446  SGVQPEVTLGTTDNDSPGADVPTPSEGTSTSSPLPAPKKP 485
            +   P V   TT   + G+ + TPS  T TS     P  P
Sbjct: 3293 TTHTPTVLTTTTTTVATGS-MATPSSSTQTSGTTHTPPVP 3331



 Score = 32.0 bits (71), Expect = 3.9
 Identities = 75/379 (19%), Positives = 111/379 (29%), Gaps = 53/379 (13%)

Query: 134  PKSSLQEDRSCPQLELCVAQNQMSPKG----PPLVSNTAPETVPSHAGMAEQCLAVEALA 189
            P   L    + P      A +  SP+     P L S     T  S   +    L      
Sbjct: 4751 PPKVLTSPATTPTATSSKATSSSSPRTATTLPVLTSTATKSTATSVTPIPSSTLGTTGTL 4810

Query: 190  EE--------VGALTQSGAVQEIATSEILSQDVLLEDASLEVGESHQPYQTSLVIEETLV 241
             E        +  +  S   +   TS +L+       A+           T+ ++ E   
Sbjct: 4811 PEQTTTPVATMSTIHPSSTPETTHTSTVLTTKATTTRATSSTSTPSSTPGTTWILTELTT 4870

Query: 242  NGSPDLPTGSLAVPHPQVGES--------VSVVTVMRDSSESSSSAPATQFIMLPLPAYS 293
              +    TG  A P    G +         +  T    S+ + SS P T +I+      +
Sbjct: 4871 AATTTAATGPTATPSSTPGTTWILTELTTTATTTASTGSTATPSSTPGTTWILTEPSTTA 4930

Query: 294  VVENPTSIKLTTTYTRRGHGTCTSPGCSFTYVTRHKPPKCPTCGNFLGGKWIPKEKPAKV 353
             V  PT    T + T+   GT   P  S T  T       PT  +    K  P   P   
Sbjct: 4931 TVTVPTGSTATASSTQATAGT---PHVSTTATT-------PTVTS---SKATPSSSPGT- 4976

Query: 354  KVELASGVSSKGSVVKRNQQPVTTEQNSSKENASKLTLENSEAVSQLLNVAPPREVGEES 413
                A+ + +  S          T   SS    +   L  +   +  ++ A P    E  
Sbjct: 4977 ----ATALPALRSTATTPTATSFTAIPSSSLGTTWTRLSQTTTPTATMSTATPSSTPETV 5032

Query: 414  EWEEVIISDAHVLVKEAPGNCGTAVTKTPVVKSGVQPEVTLGTTDNDSPGADVPTPSEGT 473
                V+ + A               T T    S   P  T GT           T    T
Sbjct: 5033 HTSTVLTATA---------------TTTGATGSVATPSSTPGTAHTTKVPTTTTTGFTAT 5077

Query: 474  STSSPLPAPKKPTGVDLLT 492
             +SSP  A   PT   + T
Sbjct: 5078 PSSSPGTALTPPTTTPMST 5096



 Score = 31.2 bits (69), Expect = 6.7
 Identities = 71/369 (19%), Positives = 117/369 (31%), Gaps = 44/369 (11%)

Query: 232  TSLVIEETLVNGSPDLPTGSLAVPH--------PQVGESVSVVTVMRDSSESSSSAPATQ 283
            T+ ++ E     +    TGS A+P         P+V  S +       S  +SSS+P T 
Sbjct: 3572 TTWILTEQTTAATTTATTGSTAIPSSTPGTAPPPKVLTSTATTPTATSSKATSSSSPRTA 3631

Query: 284  FIMLPLPAYSVVENPTSIKLTTTYTRRGHGT----CTSPGCSFTYVTRHKPPKCPTCGNF 339
              +  L + +     TS     ++T    GT     T+P  + + +     P+       
Sbjct: 3632 TTLPVLTSTATKSTATSFTPIPSFTLGTTGTLPEQTTTPMATMSTIHPSSTPETTHTSTV 3691

Query: 340  L--------------------GGKWIPKEKPAKVKVELASGVSSKGSVVKRNQQPVT--- 376
            L                    G  WI  E         A+G ++  S        +T   
Sbjct: 3692 LTTKATTTRATSSMSTPSSTPGTTWILTELTTAATTTAATGPTATPSSTPGTTWILTEPS 3751

Query: 377  TEQNSSKENASKLTLENSEAVSQLLNVAPPREVGEESEWEEVIISDAHVLVKEAPGNCGT 436
            T    +    S  T  ++ A +  L V                 S +       P    T
Sbjct: 3752 TTATVTVPTGSTATASSTRATAGTLKVLTSTATTPTVISSRATPSSSPGTATALPALRST 3811

Query: 437  AVTKTPVVKSGVQPEVTLGTTDNDSPGADVPTPSEGTSTSSPLPAPKKPTGVDLLTPGSR 496
            A T T    + + P  +LGT       +   TP+   ST++P   P+      +LT  + 
Sbjct: 3812 ATTPTATSVTAI-PSSSLGTAWTRL--SQTTTPTATMSTATPSSTPETVHTSTVLTTTTT 3868

Query: 497  APELKGRARGKPSLLAAARPMRAILPAPVNVG----RGSSMGLPRARQAFSLSDKTPSVR 552
                 G      S    A   +  +P     G      SS G       +  +  TP+ R
Sbjct: 3869 TTRATGSVATPSSTPGTAHTTK--VPTTTTTGFTATPSSSPGTALTPPVWISTTTTPTTR 3926

Query: 553  TCGLKPSTL 561
               + PS++
Sbjct: 3927 GSTVTPSSI 3935


>gi|4759162 SRY-box 14 [Homo sapiens]
          Length = 240

 Score = 45.1 bits (105), Expect = 4e-04
 Identities = 20/54 (37%), Positives = 36/54 (66%)

Query: 43 KKPRSAYLLYYYDIYLKVQQELPHLPQSEINKKISESWRLLSVAERSYYLEKAK 96
          K+P +A++++      K+ QE P +  SEI+K++   W+LLS AE+  Y+++AK
Sbjct: 9  KRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSEAEKRPYIDEAK 62


>gi|149773456 hypothetical protein LOC643314 [Homo sapiens]
          Length = 1427

 Score = 44.7 bits (104), Expect = 6e-04
 Identities = 47/177 (26%), Positives = 72/177 (40%), Gaps = 29/177 (16%)

Query: 366  SVVKRNQQPVTTEQNSSKENAS--KLTLENSEAVSQLLNVAPPREV-------------- 409
            S+V   ++ VT    S+ E A+   +T+   E  + +  V+ P E               
Sbjct: 887  SIVSLEEEDVTAAAVSAPERATVPAVTVSVPEGTAAVAAVSSPEETAPAVAAAITQEGMS 946

Query: 410  ---GEESEWEEVIISDAHVLVKEAPGNCGTAVTKTPVVKSGVQPE---VTLGTTDND-SP 462
               G   EW  + I+   V + E  G     VT    V +  +P+   V + T +   SP
Sbjct: 947  AVAGFSPEWAALAIT---VPITEEDGTPEGPVTPATTVHAPEEPDTAAVRVSTPEEPASP 1003

Query: 463  GADVPTPSEGTSTSSPLPAPKKPTGVDLLTPGSRAPELKGRA---RGKPSLLAAARP 516
             A VPTP E TS ++ +P P++PT      P    P     A     +P+  AAA P
Sbjct: 1004 AAAVPTPEEPTSPAAAVPTPEEPTSPAAAVPPPEEPTSPAAAVPTPEEPTSPAAAVP 1060



 Score = 39.7 bits (91), Expect = 0.019
 Identities = 64/290 (22%), Positives = 103/290 (35%), Gaps = 28/290 (9%)

Query: 416  EEVIISDAHVLVKEAPGNCGTAVTKTPVVKSGVQPEVTLGTTDND-SPGADVPTPSEGTS 474
            EE     A V   E P +   AV   P  +    P   +   +   SP A VPTP E TS
Sbjct: 998  EEPASPAAAVPTPEEPTSPAAAV---PTPEEPTSPAAAVPPPEEPTSPAAAVPTPEEPTS 1054

Query: 475  TSSPLPAPKKPTGVDLLTPGSRAPELKGRA---RGKPSLLAAARPM-------RAILPAP 524
             ++ +P P++PT      P    P     A     +P+  AAA P         A +P P
Sbjct: 1055 PAAAVPTPEEPTSPAAAVPTPEEPTSPAAAVPTPEEPTSPAAAVPTPEEPTSPAAAVPTP 1114

Query: 525  VN-VGRGSSMGLPRARQAFSLSDKT--------PSVRTCGLKPSTLKQLGQPIQQPSGPG 575
                   +++  P    + + +  T        P+V T     S    +  P +  S   
Sbjct: 1115 EEPASPAAAVPTPEEPASPAAAVPTPEEPAFPAPAVPTPEESASAAVAVPTPEESASPAA 1174

Query: 576  EVKLPSGPSNRTSQVKVVE--VKPDMFPPYKYSCTVTLDLGLATSRGRGKCKNPSCSYVY 633
             V  P+  ++  + V  +E    P    P   +   TL+   + +      + P+     
Sbjct: 1175 AVPTPAESASFAAVVATLEEPTSPAASVPTPAAMVATLEEFTSPAASVPTSEEPASLAAA 1234

Query: 634  TNRHKPRICPSCGVNLAKDRTEKTTKAI---EVSSPLPDVLNATEPLSTA 680
             +  +    P+  V   ++ T      +   E+SSP   V    EP S A
Sbjct: 1235 VSNPEEPTSPAAAVPTLEEPTSSAAAVLTPEELSSPAASVPTPEEPASPA 1284


>gi|83715964 high-mobility group 20B [Homo sapiens]
          Length = 317

 Score = 44.7 bits (104), Expect = 6e-04
 Identities = 24/74 (32%), Positives = 38/74 (51%)

Query: 27  GPPKKKKKYKIHGEKTKKPRSAYLLYYYDIYLKVQQELPHLPQSEINKKISESWRLLSVA 86
           G PK KK+ KI     K P + Y+ +  +   +++   P LP  EI K +   W  L   
Sbjct: 55  GWPKGKKRKKILPNGPKAPVTGYVRFLNERREQIRTRHPDLPFPEITKMLGAEWSKLQPT 114

Query: 87  ERSYYLEKAKLEKE 100
           E+  YL++A+ EK+
Sbjct: 115 EKQRYLDEAEREKQ 128


>gi|91982772 mucin 17 [Homo sapiens]
          Length = 4493

 Score = 44.7 bits (104), Expect = 6e-04
 Identities = 99/421 (23%), Positives = 150/421 (35%), Gaps = 59/421 (14%)

Query: 133  IPKSSLQEDR----SCPQLELCVAQNQMSP-------KGPPLVSNTAPETVPSHAGMAEQ 181
            IP S+L E      S P     VA ++ S           P+V++TA  + P+ A     
Sbjct: 1798 IPTSTLSEGMTPLTSTPVSHTLVANSEASTLSTTPVDSNSPVVTSTAVSSSPTPAEGTS- 1856

Query: 182  CLAVEALAEEVGALTQ---------SGAVQEIATSEILSQDVLLEDASLEVGESHQPYQT 232
             +A    +E   ALT          S     ++T+  ++   +   A  +V  S      
Sbjct: 1857 -IATSTPSEGSTALTSIPVSTTTVASSETNTLSTTPAVTSTPVTTYA--QVSSSPTTADG 1913

Query: 233  SLVIEETLVNGSPDLPTGSLAVPHPQVGESVSVVTVMRDS-------SESSSSAPATQFI 285
            S +   T   G P L +  ++       E  ++ T + D+       S++SSS       
Sbjct: 1914 SSMPTSTPREGRPPLTSIPVSTTTVASSEINTLSTTLADTRTPVTTYSQASSSPTTADGT 1973

Query: 286  MLPLPAYSVVENP-TSIKLTTTYTRRGHGTCTSPGCSFTYVTRHKPPKCPTCGN----FL 340
             +P PAYS    P TS+ L+TT       +  S     T V    P    T G+      
Sbjct: 1974 SMPTPAYSEGSTPLTSMPLSTTLVVSSEASTLST----TPVDTSTPATTSTEGSSSPTTA 2029

Query: 341  GGKWIPKEKPAKVKVELAS-------GVSSKGSVVKRNQQPVTTEQNSSKENASKLTLEN 393
            GG  I    P++    LA         VSS+G+ +        T+  +S E +S  T E 
Sbjct: 2030 GGTSIQTSTPSERTTPLAGMPVSTTLVVSSEGNTLSTTPVDSKTQVTNSTEASSSATAEG 2089

Query: 394  SEAVSQLLNVAPPREVGEESEWEEVIISDAHVLVKEAPGNCGTAVTKTPVVKSGVQPEVT 453
            S       +   P           V   +A  L      +    +T T V  S   P  T
Sbjct: 2090 SSMTISAPSEGSPLLTSIPLSTTPVASPEASTLSTTPVDSNSPVITSTEVSSS---PIPT 2146

Query: 454  LGTTDNDSPGADVPTPSEGTSTSSPLPAPK-----KPTGVDLLTPGSRAPELKGRARGKP 508
             GT+   S  +D  TP      S+ + A         T VD  TP + + E    AR  P
Sbjct: 2147 EGTSMQTSTYSDRRTPLTSMPVSTTVVASSAISTLSTTPVDTSTPVTNSTE----ARSSP 2202

Query: 509  S 509
            +
Sbjct: 2203 T 2203



 Score = 43.9 bits (102), Expect = 0.001
 Identities = 75/324 (23%), Positives = 121/324 (37%), Gaps = 45/324 (13%)

Query: 204  IATSEILSQDVLLEDASLEVGESHQPYQTSLVIEETLVNGSP----DLPTGSLAVPHPQV 259
            +A+SE  +      D S+ V  S +   +    E T +  S       P  S+ V H  V
Sbjct: 2763 VASSEASTVSTTAVDTSIPVTTSTEASSSPTTAEVTSMPTSTPSETSTPLTSMPVNHTPV 2822

Query: 260  GES---------VSVVTVMRDSSESSSSAPATQFIMLPLPAYSVVENP-TSIKLTTTYTR 309
              S         V   T +  S+++SSS    + I++P+   S      TSI ++TT   
Sbjct: 2823 ASSEAGTLSTTPVDTSTPVTTSTKASSSPTTAEGIVVPISTASEGSTLLTSIPVSTTPVA 2882

Query: 310  RGHGTCTSP---GCSFTYVTRHKPPKCPTCGNFLGGKWIPKEKPAKVKVELAS------- 359
                +  S      S    T  +    PT      G  +P   P++V   L S       
Sbjct: 2883 SSEASTLSTTPVDTSIPVTTSTEGSSSPTTAE---GTSMPISTPSEVSTPLTSILVSTVP 2939

Query: 360  ----GVSSKGSVVKRNQQPVTTEQNSSKENASKLTLENSEAVSQLLNVAPPREVGEESEW 415
                  S+  +     + PVTT   S++ ++S  T E +      + ++ P E    +  
Sbjct: 2940 VAGSEASTLSTTPVDTRTPVTT---SAEASSSPTTAEGTS-----MPISTPGE--RRTPL 2989

Query: 416  EEVIISDAHVLVKEAPGNCGT-AVTKTPVVKSGVQPEVTLGTTDNDSPGADVPTPSEGTS 474
              + +S   V   EA     T A T TPV  S    E +   T  +  G  + TPSEG++
Sbjct: 2990 TSMSVSTMPVASSEASTLSRTPADTSTPVTTS---TEASSSPTTAEGTGIPISTPSEGST 3046

Query: 475  TSSPLPAPKKPTGVDLLTPGSRAP 498
              + +P    P  +   +  S  P
Sbjct: 3047 PLTSIPVSTTPVAIPEASTLSTTP 3070



 Score = 36.6 bits (83), Expect = 0.16
 Identities = 95/430 (22%), Positives = 150/430 (34%), Gaps = 47/430 (10%)

Query: 149 LCVAQNQMSPKGPPLVSNTAPET---VPSHAGMAEQCLAVEALAEEVGALTQSGAVQE-- 203
           L V+    +    P  SNT   T     S +  AE      +   E G    S +V    
Sbjct: 581 LVVSSEASTTSTTPADSNTFVTTSSEASSSSTTAEGTSMPTSTYSERGTTITSMSVSTTL 640

Query: 204 IATSEILSQDVLLEDASLEVGESHQPYQTSLVIEETLVNGSP----DLPTGSLAVPHPQV 259
           +A+SE  +      D++  V  S +   +S   E T +  S       P  S+ V    V
Sbjct: 641 VASSEASTLSTTPVDSNTPVTTSTEATSSSTTAEGTSMPTSTYTEGSTPLTSMPVNTTLV 700

Query: 260 GES---------VSVVTVMRDSSESSSSAPATQFIMLPLPAYSVVENP-TSIKLTTTYTR 309
             S         V   T +  S+E+SSS        +P    S    P TS+ ++ T   
Sbjct: 701 ASSEASTLSTTPVDTSTPVTTSTEASSSPTTADGASMPTSTPSEGSTPLTSMPVSKTLLT 760

Query: 310 RGHGTC--TSPGCSFTYVTRHKPPKC-PTCGNFLGGKWIPKEKPAKVKVELASGVSSKGS 366
               +   T+P  + T++T      C PT      G  +P   P++    L S       
Sbjct: 761 SSEASTLSTTPLDTSTHITTSTEASCSPTTTE---GTSMPISTPSEGSPLLTS------- 810

Query: 367 VVKRNQQPVTTEQNSSKENASKLTLENSEAVSQLLNVAPPREVGEESEWEEVIISDAHVL 426
            +  +  PVT+ + S+    S   ++++  V+    V+      E +       S+    
Sbjct: 811 -IPVSITPVTSPEAST---LSTTPVDSNSPVTTSTEVSSSPTPAEGTSMPTSTYSEGRTP 866

Query: 427 VKEAPGNCGTAVTKTPVVKSGVQPEVTLGTTDNDSPGADVPTPSEGTSTSSPLPAPKKPT 486
           +   P +  T V  + +      P  T     N +     PT SEG  TS P   P + +
Sbjct: 867 LTSMPVST-TLVATSAISTLSTTPVDTSTPVTNSTEARSSPTTSEG--TSMPTSTPGEGS 923

Query: 487 GVDLLTPGSRAPELKGRARGKPSLLAAARPMRAILPAPVNVGRGSSMGLPRARQAFSLSD 546
                 P S  P +   AR       +A P+    P   +    SS   P   +  S+  
Sbjct: 924 TPLTSMPDSTTPVVSSEAR-----TLSATPVDTSTPVTTSTEATSS---PTTAEGTSIPT 975

Query: 547 KTPSVRTCGL 556
            TPS  T  L
Sbjct: 976 STPSEGTTPL 985



 Score = 35.8 bits (81), Expect = 0.27
 Identities = 68/261 (26%), Positives = 105/261 (40%), Gaps = 42/261 (16%)

Query: 232  TSLVIEETLVNGSPDLPTGSLAVPHPQVGESVSVVTVMRDSSESSSSAPATQFIMLPLPA 291
            TS+ +  TLV  SP+  T  L  P    G  V+       S+E SSS    +   +P   
Sbjct: 1281 TSIPVSTTLVT-SPEAST-LLTTPVDTKGPVVT-------SNEVSSSPTPAEGTSMPTST 1331

Query: 292  YSVVENP-TSIKLTTTYTRRGHGTC--TSPGCSFTYVTRHKPP-KCPTCGNFLGGKWIPK 347
            YS    P TSI + TT       +   T+P  + T VT        PT      G  +P 
Sbjct: 1332 YSEGRTPLTSIPVNTTLVASSAISILSTTPVDNSTPVTTSTEACSSPTTSE---GTSMPN 1388

Query: 348  EKPAK-------VKVELASGVSSKGSVVKRNQQPVTTEQNSSKENASKLTLENSEAVSQL 400
              P++       + V     VSS+ S +       +T   +S E  S  T   +E +S  
Sbjct: 1389 SNPSEGTTPLTSIPVSTTPVVSSEASTLSATPVDTSTPGTTSAEATSSPT--TAEGIS-- 1444

Query: 401  LNVAPPREVGEESEWEEVIISDAHVLVKEAPGNCGTAVTKTPVVKSGVQPEVTLGTTDND 460
            +  + P E   ++  + + +S+  V   EA     + ++ TPV  +   P VT     + 
Sbjct: 1445 IPTSTPSE--GKTPLKSIPVSNTPVANSEA-----STLSTTPVDSNS--PVVTSTAVSSS 1495

Query: 461  SPGADVPTPSEGTSTSSPLPA 481
                  PTP+EGTS +   P+
Sbjct: 1496 ------PTPAEGTSIAISTPS 1510



 Score = 35.4 bits (80), Expect = 0.36
 Identities = 82/368 (22%), Positives = 123/368 (33%), Gaps = 46/368 (12%)

Query: 133  IPKSSLQEDRSCPQLELCVAQNQMSPKGPPLVSNTAPETVPSHAGMAEQCLAVEALAEEV 192
            IP ++  E  S P      A+    P  PP    T   ++P         L V + A  +
Sbjct: 1130 IPVTTSTEASSSPT----TAEGTSIPTSPPSEGTTPLASMP-----VSTTLVVSSEANTL 1180

Query: 193  GALTQSGAVQEIATSEILSQDVLLEDASLEV---GESHQPYQTSLVIEETLVNGSP--DL 247
                     Q   ++E  S     E  S+     GE   P  TS+ +  T V  S    L
Sbjct: 1181 STTPVDSKTQVATSTEASSPPPTAEVTSMPTSTPGERSTPL-TSMPVRHTPVASSEASTL 1239

Query: 248  PTGSL--AVPHPQVGESVSVVTVMRDSS--ESSSSAPATQFIMLPLPAYSVVENPTSIKL 303
             T  +  + P     E+ S  T    +S   S++S  +T    +P+    V     S  L
Sbjct: 1240 STSPVDTSTPVTTSAETSSSPTTAEGTSLPTSTTSEGSTLLTSIPVSTTLVTSPEASTLL 1299

Query: 304  TTTYTRRGHGTCTSPGCSFTYVTRHKPPKCPTCGNFLGGKWIPKEKPAKVKVELASGVSS 363
            TT    +G    ++   S    T  +    PT   +  G+      P    +  +S +S 
Sbjct: 1300 TTPVDTKGPVVTSNEVSSSP--TPAEGTSMPT-STYSEGRTPLTSIPVNTTLVASSAISI 1356

Query: 364  KGSVVKRNQQPVTTEQNS-----SKENASKLTLENSEAVSQLLNVAPPREVGEESEWEEV 418
              +    N  PVTT   +     + E  S      SE  + L ++               
Sbjct: 1357 LSTTPVDNSTPVTTSTEACSSPTTSEGTSMPNSNPSEGTTPLTSIP-------------- 1402

Query: 419  IISDAHVLVKEAPGNCGTAV-TKTPVVKSGVQPEVTLGTTDNDSPGADVPTPSEGTSTSS 477
             +S   V+  EA     T V T TP   S    E T   T  +       TPSEG +   
Sbjct: 1403 -VSTTPVVSSEASTLSATPVDTSTPGTTSA---EATSSPTTAEGISIPTSTPSEGKTPLK 1458

Query: 478  PLPAPKKP 485
             +P    P
Sbjct: 1459 SIPVSNTP 1466



 Score = 34.3 bits (77), Expect = 0.79
 Identities = 73/313 (23%), Positives = 118/313 (37%), Gaps = 57/313 (18%)

Query: 233  SLVIEETLVNGSPDLPTG-SLAVPHPQVGE----SVSVVTVMRDSSESSSSAPATQFIML 287
            S V+  T V+ SP    G S+A+  P  G     S+ V T    SSE +S +        
Sbjct: 1484 SPVVTSTAVSSSPTPAEGTSIAISTPSEGSTALTSIPVSTTTVASSEINSLSTTPAVTST 1543

Query: 288  PLPAYSVVEN-PTSIK----LTTTYTRRGHGTCTSPGCSFTYVTRHKPPKCPTCGNFLGG 342
            P+  YS   + PT+       T+TY+       + P  +   V+           N L  
Sbjct: 1544 PVTTYSQASSSPTTADGTSMQTSTYSEGSTPLTSLPVSTMLVVSSE--------ANTLST 1595

Query: 343  KWIPKEKPAKVKVELASGVSSKGSVVKRNQQ----------PVTTEQNSSKENASKLTL- 391
              I  +       E +S  +++GS +  +            PV+T   +S E ++  T  
Sbjct: 1596 TPIDSKTQVTASTEASSSTTAEGSSMTISTPSEGSPLLTSIPVSTTPVASPEASTLSTTP 1655

Query: 392  --ENSEAVSQL-LNVAPPREVGEE---SEWEEVIISDAHVLVKEAP--GNCGTAVTKTPV 443
               NS  ++   ++ +P    G     S + E       + V+  P   +  + ++ TPV
Sbjct: 1656 VDSNSPVITSTEVSSSPTPAEGTSMPTSTYTEGRTPLTSITVRTTPVASSAISTLSTTPV 1715

Query: 444  VKSGVQPEVTLGTTDNDSP----GADVP--TPSEGTSTSSPLPAPKKP-----------T 486
              S     VT  T    SP    G  +P  TPSEGT+  + +P    P           T
Sbjct: 1716 DNS---TPVTTSTEARSSPTTSEGTSMPNSTPSEGTTPLTSIPVSTTPVLSSEASTLSAT 1772

Query: 487  GVDLLTPGSRAPE 499
             +D  TP + + E
Sbjct: 1773 PIDTSTPVTTSTE 1785



 Score = 33.9 bits (76), Expect = 1.0
 Identities = 116/558 (20%), Positives = 184/558 (32%), Gaps = 64/558 (11%)

Query: 141  DRSCPQLELCVAQNQMSPKGPPLVSNTAPETVPSHAGMAEQCLAVEALAEEVG------A 194
            DRS P       Q+  +P  P ++  T P + PS        + V   +  +        
Sbjct: 3602 DRSTPVTTS--TQSNSTPTPPEVI--TLPMSTPSEVSTPLTIMPVSTTSVTISEAGTAST 3657

Query: 195  LTQSGAVQEIATSEILSQDVLLEDASLEV---GESHQPYQTSLVIEETLVNGSPDLPTGS 251
            L    +   I ++++ S  V  E  ++ +    E   P  T++ +  T V  S     GS
Sbjct: 3658 LPVDTSTPVITSTQVSSSPVTPEGTTMPIWTPSEGSTPL-TTMPVSTTRVTSSE----GS 3712

Query: 252  LAVPHPQVGESVSVVTVMRDSSESSSSAPATQFIMLPLPAYSVVENPTSIKLTTTYTRRG 311
              +  P V  S  V T     S S++    T  + +P+   ++    T+I ++TT   R 
Sbjct: 3713 -TLSTPSVVTSTPVTTSTEAISSSATLDSTTMSVSMPMEISTL---GTTILVSTTPVTRF 3768

Query: 312  HGTCT----SPGCSFTYVTRHKPPKCPTCGNFLGGKWIPKEKPAKVKVELASGVSSKGSV 367
              + T    S   S +  T  +    PT     G   +P    ++    L + + S  SV
Sbjct: 3769 PESSTPSIPSVYTSMSMTTASEGSSSPT--TLEGTTTMPMSTTSERSTLLTTVLISPISV 3826

Query: 368  VKRNQQPVTTEQNSSKENASKLTLENSEAVSQLLNVAPPR-EVGEESEWEEVIISDAHVL 426
            +  ++   T        +   LT   + + S    V   R  +  E       +  +  L
Sbjct: 3827 MSPSEAS-TLSTPPGDTSTPLLTSTKAGSFSIPAEVTTIRISITSERSTPLTTLLVSTTL 3885

Query: 427  VKEAPGNC-------GTAVTKTPVVKSGVQPEVTLGTT-------DNDSPGADVPTPSEG 472
                PG          T+ T TP   +   P + + TT       +  +PG  +  PS  
Sbjct: 3886 PTSFPGASIASTPPLDTSTTFTPSTDTASTPTIPVATTISVSVITEGSTPGTTIFIPSTP 3945

Query: 473  TSTSSPLPAPKKPTGVDLLTPGSRAPELKGRARGKPSLLAAARPMRAILPAPVNVGRGSS 532
             ++S+    P     V   TP   + EL   +    S   +    +      +       
Sbjct: 3946 VTSSTADVFPATTGAVS--TPVITSTELNTPSTSSSSTTTSFSTTKEFTTPAMTTAA--- 4000

Query: 533  MGLPRARQAFSLSDKTPSV--RTCGLKPSTLKQLGQPIQQPSGPGEVKLPSGPSNRTSQV 590
               P      S +  TP    R C    STL     P    S       PS  S+R S +
Sbjct: 4001 ---PLTYVTMSTAPSTPRTTSRGCTTSASTLSATSTPHTSTSVTTRPVTPSSESSRPSTI 4057

Query: 591  KVVEVKPDMFPPYKYSCTVTLDLGLATSRGRGKCKNPSCSYVYTNRHKP--RICPSCGVN 648
                + P  FPP   S   T      T        NP      T R KP  R      V 
Sbjct: 4058 TSHTI-PPTFPPAHSSTPPTTSASSTT-------VNPEAVTTMTTRTKPSTRTTSFPTVT 4109

Query: 649  LAKDRTEKTTKAIEVSSP 666
                 T  T K+   S+P
Sbjct: 4110 TTAVPTNTTIKSNPTSTP 4127



 Score = 32.3 bits (72), Expect = 3.0
 Identities = 73/298 (24%), Positives = 107/298 (35%), Gaps = 60/298 (20%)

Query: 226 SHQPYQTSL-VIEETLVNGSPDLPTGSLAVPHPQVGESVSVVTVMRDSSESSSSAPATQF 284
           S  P  TS  V   T  + SP    G+ ++P     E  + +T M  S    +S+ A+  
Sbjct: 709 STTPVDTSTPVTTSTEASSSPTTADGA-SMPTSTPSEGSTPLTSMPVSKTLLTSSEASTL 767

Query: 285 IMLPLPAYSVVENPTSIKLTTTYTR----------RGHGTCTSPGCSFTYVTRHKPPKCP 334
              PL   + +   T    + T T            G    TS   S T VT    P+  
Sbjct: 768 STTPLDTSTHITTSTEASCSPTTTEGTSMPISTPSEGSPLLTSIPVSITPVTS---PEAS 824

Query: 335 TCGNFLGGKWIPKEKPAKVKVELAS------GVSSKGSVVKRNQQPVTTEQNSSKENASK 388
           T    L    +    P     E++S      G S   S     + P+T+   S+      
Sbjct: 825 T----LSTTPVDSNSPVTTSTEVSSSPTPAEGTSMPTSTYSEGRTPLTSMPVST------ 874

Query: 389 LTLENSEAVSQL----LNVAPPREVGEESEWEEVIISDAHVLVKEAPGNCGTAVTK---- 440
            TL  + A+S L    ++ + P     E+       S+   +    PG   T +T     
Sbjct: 875 -TLVATSAISTLSTTPVDTSTPVTNSTEAR-SSPTTSEGTSMPTSTPGEGSTPLTSMPDS 932

Query: 441 -TPVVKSGVQP----------EVTLGTTDNDSP----GADVPT--PSEGTS--TSSPL 479
            TPVV S  +            VT  T    SP    G  +PT  PSEGT+  TS+P+
Sbjct: 933 TTPVVSSEARTLSATPVDTSTPVTTSTEATSSPTTAEGTSIPTSTPSEGTTPLTSTPV 990



 Score = 32.0 bits (71), Expect = 3.9
 Identities = 55/271 (20%), Positives = 92/271 (33%), Gaps = 38/271 (14%)

Query: 226  SHQPYQTSLVI--EETLVNGSPDLPTGSLAVPHPQVGESVSVVTVMRDSSESSSSAPATQ 283
            ++ P  T LV+  E++ ++ +P   +  +         + +  T +  S+ S    P T 
Sbjct: 3167 TYMPVSTMLVVSSEDSTLSATPVDTSTPVTTSTEATSSTTAEGTSIPTSTPSEGMTPLTS 3226

Query: 284  FIMLPLPAYSV---VENPTSIKLTTTYTRRGHGTCTSPGCSFTYVTRHKPPKCPTCGNFL 340
              +   P  S    + + T +   T  T     + + P    T +    P +        
Sbjct: 3227 VPVSNTPVASSEASILSTTPVDSNTPLTTSTEASSSPPTAEGTSMPTSTPSE-------- 3278

Query: 341  GGKWIPKEKPAKVKVELASGVSSKGSVVKRNQQPVTTEQNSSK-----ENASKLTLENSE 395
             G       P       +S  S+  +       PVTT   +S      +  S  T   SE
Sbjct: 3279 -GSTPLTSMPVSTTTVASSETSTLSTTPADTSTPVTTYSQASSSPPIADGTSMPTSTYSE 3337

Query: 396  AVSQLLNVAPPREVGEESEWEEVIISDAHVLVKEAPGNCGTAV-TKTPVVKSGVQPEVTL 454
              + L N++                S   V+  EA     T V T TPV  S    E +L
Sbjct: 3338 GSTPLTNMS---------------FSTTPVVSSEASTLSTTPVDTSTPVTTS---TEASL 3379

Query: 455  GTTDNDSPGADVPTPSEGTSTSSPLPAPKKP 485
              T  +       +PSEGT+  + +P    P
Sbjct: 3380 SPTTAEGTSIPTSSPSEGTTPLASMPVSTTP 3410



 Score = 31.6 bits (70), Expect = 5.1
 Identities = 80/369 (21%), Positives = 118/369 (31%), Gaps = 41/369 (11%)

Query: 236  IEETLVNGSPDLPTGSLAVPHPQVGESVSVVTVMRDSSESSSSAPATQFIMLPLPAYSVV 295
            +  T V+ S  + T + A   P   E  S    MR S+ S  S P T  ++  LP  S  
Sbjct: 2712 LSTTPVDTSTPVTTSAEASSSPTTAEGTS----MRISTPSDGSTPLTSILVSTLPVASSE 2767

Query: 296  ENPTSIKLTTTYTRRGHGTCTSPGCSFTYVTRHKPPKCPTCGNFLGGKWIPKEKPAKVKV 355
             +  S               T+   S    T  +    PT         +P   P++   
Sbjct: 2768 ASTVS--------------TTAVDTSIPVTTSTEASSSPTTAEVTS---MPTSTPSETST 2810

Query: 356  ELASGVSSKGSVVKRNQQPVTTEQNSSKENASKLTLENSEAVSQLLNVAPPREVGEESE- 414
             L S   +   V       ++T    +    +  T  +S   +    V P     E S  
Sbjct: 2811 PLTSMPVNHTPVASSEAGTLSTTPVDTSTPVTTSTKASSSPTTAEGIVVPISTASEGSTL 2870

Query: 415  WEEVIISDAHVLVKEAPGNCGTAV-TKTPVVKS---GVQPEVTLGTTDNDSPGADVPTPS 470
               + +S   V   EA     T V T  PV  S      P    GT+   S  ++V TP 
Sbjct: 2871 LTSIPVSTTPVASSEASTLSTTPVDTSIPVTTSTEGSSSPTTAEGTSMPISTPSEVSTPL 2930

Query: 471  EGTSTSSPLPAPKKPTGVDLLTPGSRAPELKGRARGKPSLLAAARPMRAILP----APVN 526
                 S+   A  + + +      +R P             A    M    P     P+ 
Sbjct: 2931 TSILVSTVPVAGSEASTLSTTPVDTRTPVTTSAEASSSPTTAEGTSMPISTPGERRTPLT 2990

Query: 527  VGRGSSMGLPRARQAFSLSDKTPSVRT--------CGLKPSTLKQLGQPIQQPSGPGEVK 578
                S+M  P A    S   +TP+  +            P+T +  G PI  PS  G   
Sbjct: 2991 SMSVSTM--PVASSEASTLSRTPADTSTPVTTSTEASSSPTTAEGTGIPISTPS-EGSTP 3047

Query: 579  LPSGPSNRT 587
            L S P + T
Sbjct: 3048 LTSIPVSTT 3056


>gi|7662274 epidermal Langerhans cell protein LCP1 [Homo sapiens]
          Length = 621

 Score = 44.7 bits (104), Expect = 6e-04
 Identities = 60/267 (22%), Positives = 108/267 (40%), Gaps = 42/267 (15%)

Query: 29  PKKKKKYKIHGEKTKKPRSAYLLYYYDIYLKVQQELPHLPQSEINKKISESWRLLSVAER 88
           PKK+KK   +  + +KP SAY L++ D    ++ + P+    E++K ++  W  L   ++
Sbjct: 212 PKKRKKKDPN--EPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQK 269

Query: 89  SYYLEKAKLEKEGLDPNSKLSALTAVVPDIPGFRKILPRSDYIIIPKSSLQEDRSCPQLE 148
             Y  K +  K+       L AL A                     K + +   +   +E
Sbjct: 270 QVYKRKTEAAKK-----EYLKALAAY--------------------KDNQECQATVETVE 304

Query: 149 LCVAQNQMSPKGPPLV----SNTAPETVPSHAGMAEQCLAVEALAEEVGALTQSGA-VQE 203
           L  A    +P  PP+     ++ AP ++   A ++   +    L+  V     SGA  Q 
Sbjct: 305 LDPAPPSQTPSPPPMATVDPASPAPASIEPPA-LSPSIVVNSTLSSYVANQASSGAGGQP 363

Query: 204 IATSEILSQDVLLEDASLEVGESHQPYQTSLVIEETLVNGSPDLPTGSLAVPHPQVGESV 263
             T  I+++ +L    ++  G          VI  T+V  S  L  G  +    Q  +  
Sbjct: 364 NITKLIITKQMLPSSITMSQG------GMVTVIPATVVT-SRGLQLGQTSTATIQPSQQA 416

Query: 264 SVVTVMRDSSESSSSAPATQFIMLPLP 290
            +VT  R   +++++A A   + LP P
Sbjct: 417 QIVT--RSVLQAAAAAAAAASMQLPPP 441


>gi|169168462 PREDICTED: similar to high mobility group box 3 [Homo
           sapiens]
          Length = 204

 Score = 44.3 bits (103), Expect = 8e-04
 Identities = 27/99 (27%), Positives = 46/99 (46%), Gaps = 5/99 (5%)

Query: 14  MEEIEEAYCYTSPGPPKKKKKYKIHGEKTKKPRSAYLLYYYDIYLKVQQELPHLPQSEIN 73
           M + ++ +C      P K  K K      K+P S + L+  +I  K++   P +   ++ 
Sbjct: 60  MAKTDKVHCDREMKGPAKGGKKKKDPSAPKRPPSGFFLFSSEIRPKIKSTNPGISIGDVA 119

Query: 74  KKISESWRLLSVAERSYYLEKA-----KLEKEGLDPNSK 107
           KK+ E W  L+ +E+  Y+ K      K EK+  D  SK
Sbjct: 120 KKLGEMWNNLNDSEKQPYITKTAKLKEKYEKDVADSKSK 158



 Score = 33.5 bits (75), Expect = 1.4
 Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 1/68 (1%)

Query: 40  EKTKKPRSAYLLYYYDIYLKVQQELPHLPQSEINKKISESWRLLSVAERSYYLEKAKLEK 99
           +K K   SAY+ +      + +++ P +  +E +KK SE W+ +S  E+S + E AK +K
Sbjct: 7   KKPKGKMSAYVFFVQTCREECKKKNP-VNFAEFSKKCSERWKTMSGKEKSKFDEMAKTDK 65

Query: 100 EGLDPNSK 107
              D   K
Sbjct: 66  VHCDREMK 73


>gi|169168166 PREDICTED: similar to high mobility group box 3 [Homo
           sapiens]
          Length = 204

 Score = 44.3 bits (103), Expect = 8e-04
 Identities = 27/99 (27%), Positives = 46/99 (46%), Gaps = 5/99 (5%)

Query: 14  MEEIEEAYCYTSPGPPKKKKKYKIHGEKTKKPRSAYLLYYYDIYLKVQQELPHLPQSEIN 73
           M + ++ +C      P K  K K      K+P S + L+  +I  K++   P +   ++ 
Sbjct: 60  MAKTDKVHCDREMKGPAKGGKKKKDPSAPKRPPSGFFLFSSEIRPKIKSTNPGISIGDVA 119

Query: 74  KKISESWRLLSVAERSYYLEKA-----KLEKEGLDPNSK 107
           KK+ E W  L+ +E+  Y+ K      K EK+  D  SK
Sbjct: 120 KKLGEMWNNLNDSEKQPYITKTAKLKEKYEKDVADSKSK 158



 Score = 33.5 bits (75), Expect = 1.4
 Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 1/68 (1%)

Query: 40  EKTKKPRSAYLLYYYDIYLKVQQELPHLPQSEINKKISESWRLLSVAERSYYLEKAKLEK 99
           +K K   SAY+ +      + +++ P +  +E +KK SE W+ +S  E+S + E AK +K
Sbjct: 7   KKPKGKMSAYVFFVQTCREECKKKNP-VNFAEFSKKCSERWKTMSGKEKSKFDEMAKTDK 65

Query: 100 EGLDPNSK 107
              D   K
Sbjct: 66  VHCDREMK 73


>gi|239742753 PREDICTED: similar to high mobility group box 3
           isoform 2 [Homo sapiens]
          Length = 183

 Score = 44.3 bits (103), Expect = 8e-04
 Identities = 27/99 (27%), Positives = 46/99 (46%), Gaps = 5/99 (5%)

Query: 14  MEEIEEAYCYTSPGPPKKKKKYKIHGEKTKKPRSAYLLYYYDIYLKVQQELPHLPQSEIN 73
           M + ++ +C      P K  K K      K+P S + L+  +I  K++   P +   ++ 
Sbjct: 42  MAKTDKVHCDREMKGPAKGGKKKKDPSAPKRPPSGFFLFSSEIRPKIKSTNPGISIGDVA 101

Query: 74  KKISESWRLLSVAERSYYLEKA-----KLEKEGLDPNSK 107
           KK+ E W  L+ +E+  Y+ K      K EK+  D  SK
Sbjct: 102 KKLGEMWNNLNDSEKQPYITKTAKLKEKYEKDVADSKSK 140


>gi|113416897 PREDICTED: similar to high mobility group box 3
           isoform 1 [Homo sapiens]
          Length = 201

 Score = 44.3 bits (103), Expect = 8e-04
 Identities = 27/99 (27%), Positives = 46/99 (46%), Gaps = 5/99 (5%)

Query: 14  MEEIEEAYCYTSPGPPKKKKKYKIHGEKTKKPRSAYLLYYYDIYLKVQQELPHLPQSEIN 73
           M + ++ +C      P K  K K      K+P S + L+  +I  K++   P +   ++ 
Sbjct: 60  MAKTDKVHCDREMKGPAKGGKKKKDPSAPKRPPSGFFLFSSEIRPKIKSTNPGISIGDVA 119

Query: 74  KKISESWRLLSVAERSYYLEKA-----KLEKEGLDPNSK 107
           KK+ E W  L+ +E+  Y+ K      K EK+  D  SK
Sbjct: 120 KKLGEMWNNLNDSEKQPYITKTAKLKEKYEKDVADSKSK 158



 Score = 33.5 bits (75), Expect = 1.4
 Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 1/68 (1%)

Query: 40  EKTKKPRSAYLLYYYDIYLKVQQELPHLPQSEINKKISESWRLLSVAERSYYLEKAKLEK 99
           +K K   SAY+ +      + +++ P +  +E +KK SE W+ +S  E+S + E AK +K
Sbjct: 7   KKPKGKMSAYVFFVQTCREECKKKNP-VNFAEFSKKCSERWKTMSGKEKSKFDEMAKTDK 65

Query: 100 EGLDPNSK 107
              D   K
Sbjct: 66  VHCDREMK 73


>gi|30179900 SRY (sex determining region Y)-box 1 [Homo sapiens]
          Length = 391

 Score = 44.3 bits (103), Expect = 8e-04
 Identities = 18/61 (29%), Positives = 40/61 (65%)

Query: 36  KIHGEKTKKPRSAYLLYYYDIYLKVQQELPHLPQSEINKKISESWRLLSVAERSYYLEKA 95
           K + ++ K+P +A++++      K+ QE P +  SEI+K++   W+++S AE+  ++++A
Sbjct: 45  KANQDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKVMSEAEKRPFIDEA 104

Query: 96  K 96
           K
Sbjct: 105 K 105


>gi|28195386 sex-determining region Y-box 2 [Homo sapiens]
          Length = 317

 Score = 43.5 bits (101), Expect = 0.001
 Identities = 18/57 (31%), Positives = 37/57 (64%)

Query: 40 EKTKKPRSAYLLYYYDIYLKVQQELPHLPQSEINKKISESWRLLSVAERSYYLEKAK 96
          ++ K+P +A++++      K+ QE P +  SEI+K++   W+LLS  E+  ++++AK
Sbjct: 39 DRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSETEKRPFIDEAK 95


>gi|30179903 SRY (sex determining region Y)-box 8 [Homo sapiens]
          Length = 446

 Score = 42.4 bits (98), Expect = 0.003
 Identities = 17/54 (31%), Positives = 36/54 (66%)

Query: 43  KKPRSAYLLYYYDIYLKVQQELPHLPQSEINKKISESWRLLSVAERSYYLEKAK 96
           K+P +A++++      K+  + PHL  +E++K + + WRLLS +E+  ++E+A+
Sbjct: 103 KRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLSESEKRPFVEEAE 156


>gi|13786123 HMG-box transcription factor TCF-3 [Homo sapiens]
          Length = 588

 Score = 42.4 bits (98), Expect = 0.003
 Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 3/84 (3%)

Query: 17  IEEAYCYTSPGPPKKKKKYKIHGEKTKKPRSAYLLYYYDIYLKVQQELPHLPQSEINKKI 76
           +  A    SP   KK+++ K H    KKP +A++LY  ++  KV  E      + IN+ +
Sbjct: 324 LSPAVSVKSPVTVKKEEEKKPH---VKKPLNAFMLYMKEMRAKVVAECTLKESAAINQIL 380

Query: 77  SESWRLLSVAERSYYLEKAKLEKE 100
              W  LS  E++ Y E A+ E++
Sbjct: 381 GRKWHNLSREEQAKYYELARKERQ 404


>gi|4557853 transcription factor SOX9 [Homo sapiens]
          Length = 509

 Score = 42.0 bits (97), Expect = 0.004
 Identities = 19/83 (22%), Positives = 46/83 (55%)

Query: 14  MEEIEEAYCYTSPGPPKKKKKYKIHGEKTKKPRSAYLLYYYDIYLKVQQELPHLPQSEIN 73
           + ++ + Y +T    P +      +    K+P +A++++      K+  + PHL  +E++
Sbjct: 77  VSQVLKGYDWTLVPMPVRVNGSSKNKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELS 136

Query: 74  KKISESWRLLSVAERSYYLEKAK 96
           K + + WRLL+ +E+  ++E+A+
Sbjct: 137 KTLGKLWRLLNESEKRPFVEEAE 159


>gi|226246533 TOX high mobility group box family member 3 isoform 2
           [Homo sapiens]
          Length = 571

 Score = 41.6 bits (96), Expect = 0.005
 Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 2/75 (2%)

Query: 26  PGPPKKKKKYKIHGEKTKKPRSAYLLYYYDIYLKVQQELPHLPQSEINKKISESWRLLSV 85
           P  PKKKKK   +  + +KP SAY L++ D    ++ + P+    E++K ++  W  L  
Sbjct: 236 PKTPKKKKKKDPN--EPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGE 293

Query: 86  AERSYYLEKAKLEKE 100
            ++  Y  K +  K+
Sbjct: 294 EQKQVYKRKTEAAKK 308


>gi|226054295 TOX high mobility group box family member 3 isoform 1
           [Homo sapiens]
          Length = 576

 Score = 41.6 bits (96), Expect = 0.005
 Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 2/75 (2%)

Query: 26  PGPPKKKKKYKIHGEKTKKPRSAYLLYYYDIYLKVQQELPHLPQSEINKKISESWRLLSV 85
           P  PKKKKK   +  + +KP SAY L++ D    ++ + P+    E++K ++  W  L  
Sbjct: 241 PKTPKKKKKKDPN--EPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGE 298

Query: 86  AERSYYLEKAKLEKE 100
            ++  Y  K +  K+
Sbjct: 299 EQKQVYKRKTEAAKK 313


>gi|19923236 nuclear antigen Sp100 isoform 2 [Homo sapiens]
          Length = 879

 Score = 41.6 bits (96), Expect = 0.005
 Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 3/75 (4%)

Query: 28  PPK--KKKKYKIHGEKTKKPRSAYLLYYYDIYLKVQQELPHLPQSEINKKISESWRLLSV 85
           PPK  KKKK+K      K+P  A+ L+  +   K++ E P L   ++ KK++  W   + 
Sbjct: 754 PPKGEKKKKFK-DPNAPKRPPLAFFLFCSEYRPKIKGEHPGLSIDDVVKKLAGMWNNTAA 812

Query: 86  AERSYYLEKAKLEKE 100
           A++ +Y +KA   KE
Sbjct: 813 ADKQFYEKKAAKLKE 827


>gi|224967054 SRY (sex determining region Y)-box 6 isoform 4 [Homo
           sapiens]
          Length = 841

 Score = 41.2 bits (95), Expect = 0.006
 Identities = 44/195 (22%), Positives = 82/195 (42%), Gaps = 17/195 (8%)

Query: 43  KKPRSAYLLYYYDIYLKVQQELPHLPQSEINKKISESWRLLSVAERS-YYLEKAKLEKEG 101
           K+P +A++++  D   K+ Q  P +  S I+K +   W+ +S  E+  YY E+A+L K  
Sbjct: 635 KRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYEEQARLSKIH 694

Query: 102 LD--PNSKLSALTAVVPDIPGFRKILPRSDYIIIPKSSLQEDRSC------PQLELCVAQ 153
           L+  PN K          + G  K L   +Y  + +S  QE R        PQ+ +    
Sbjct: 695 LEKYPNYKYKPRPKRTCIVDG--KKLRIGEYKQLMRSRRQEMRQFFTVGQQPQIPITTGT 752

Query: 154 NQMSPKGPPLVSNTAPETVPSHAGMAEQCLAVEALAEEVGALTQSGAVQEIATSEILSQD 213
             + P G   ++ T P        M   C +  A  E    + QS    +     +   +
Sbjct: 753 GVVYP-GAITMATTTPS-----PQMTSDCSSTSASPEPSLPVIQSTYGMKTDGGSLAGNE 806

Query: 214 VLLEDASLEVGESHQ 228
           ++  +  +E+ + ++
Sbjct: 807 MINGEDEMEMYDDYE 821


>gi|224967050 SRY (sex determining region Y)-box 6 isoform 3 [Homo
           sapiens]
          Length = 801

 Score = 41.2 bits (95), Expect = 0.006
 Identities = 44/195 (22%), Positives = 82/195 (42%), Gaps = 17/195 (8%)

Query: 43  KKPRSAYLLYYYDIYLKVQQELPHLPQSEINKKISESWRLLSVAERS-YYLEKAKLEKEG 101
           K+P +A++++  D   K+ Q  P +  S I+K +   W+ +S  E+  YY E+A+L K  
Sbjct: 595 KRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYEEQARLSKIH 654

Query: 102 LD--PNSKLSALTAVVPDIPGFRKILPRSDYIIIPKSSLQEDRSC------PQLELCVAQ 153
           L+  PN K          + G  K L   +Y  + +S  QE R        PQ+ +    
Sbjct: 655 LEKYPNYKYKPRPKRTCIVDG--KKLRIGEYKQLMRSRRQEMRQFFTVGQQPQIPITTGT 712

Query: 154 NQMSPKGPPLVSNTAPETVPSHAGMAEQCLAVEALAEEVGALTQSGAVQEIATSEILSQD 213
             + P G   ++ T P        M   C +  A  E    + QS    +     +   +
Sbjct: 713 GVVYP-GAITMATTTPS-----PQMTSDCSSTSASPEPSLPVIQSTYGMKTDGGSLAGNE 766

Query: 214 VLLEDASLEVGESHQ 228
           ++  +  +E+ + ++
Sbjct: 767 MINGEDEMEMYDDYE 781


>gi|70909338 SRY (sex determining region Y)-box 6 isoform 1 [Homo
           sapiens]
          Length = 804

 Score = 41.2 bits (95), Expect = 0.006
 Identities = 44/195 (22%), Positives = 82/195 (42%), Gaps = 17/195 (8%)

Query: 43  KKPRSAYLLYYYDIYLKVQQELPHLPQSEINKKISESWRLLSVAERS-YYLEKAKLEKEG 101
           K+P +A++++  D   K+ Q  P +  S I+K +   W+ +S  E+  YY E+A+L K  
Sbjct: 598 KRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYEEQARLSKIH 657

Query: 102 LD--PNSKLSALTAVVPDIPGFRKILPRSDYIIIPKSSLQEDRSC------PQLELCVAQ 153
           L+  PN K          + G  K L   +Y  + +S  QE R        PQ+ +    
Sbjct: 658 LEKYPNYKYKPRPKRTCIVDG--KKLRIGEYKQLMRSRRQEMRQFFTVGQQPQIPITTGT 715

Query: 154 NQMSPKGPPLVSNTAPETVPSHAGMAEQCLAVEALAEEVGALTQSGAVQEIATSEILSQD 213
             + P G   ++ T P        M   C +  A  E    + QS    +     +   +
Sbjct: 716 GVVYP-GAITMATTTPS-----PQMTSDCSSTSASPEPSLPVIQSTYGMKTDGGSLAGNE 769

Query: 214 VLLEDASLEVGESHQ 228
           ++  +  +E+ + ++
Sbjct: 770 MINGEDEMEMYDDYE 784


>gi|71037389 SRY (sex determining region Y)-box 6 isoform 2 [Homo
           sapiens]
          Length = 808

 Score = 41.2 bits (95), Expect = 0.006
 Identities = 44/195 (22%), Positives = 82/195 (42%), Gaps = 17/195 (8%)

Query: 43  KKPRSAYLLYYYDIYLKVQQELPHLPQSEINKKISESWRLLSVAERS-YYLEKAKLEKEG 101
           K+P +A++++  D   K+ Q  P +  S I+K +   W+ +S  E+  YY E+A+L K  
Sbjct: 602 KRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYEEQARLSKIH 661

Query: 102 LD--PNSKLSALTAVVPDIPGFRKILPRSDYIIIPKSSLQEDRSC------PQLELCVAQ 153
           L+  PN K          + G  K L   +Y  + +S  QE R        PQ+ +    
Sbjct: 662 LEKYPNYKYKPRPKRTCIVDG--KKLRIGEYKQLMRSRRQEMRQFFTVGQQPQIPITTGT 719

Query: 154 NQMSPKGPPLVSNTAPETVPSHAGMAEQCLAVEALAEEVGALTQSGAVQEIATSEILSQD 213
             + P G   ++ T P        M   C +  A  E    + QS    +     +   +
Sbjct: 720 GVVYP-GAITMATTTPS-----PQMTSDCSSTSASPEPSLPVIQSTYGMKTDGGSLAGNE 773

Query: 214 VLLEDASLEVGESHQ 228
           ++  +  +E+ + ++
Sbjct: 774 MINGEDEMEMYDDYE 788


>gi|197276602 microtubule-associated protein 4 isoform 5 [Homo
           sapiens]
          Length = 817

 Score = 41.2 bits (95), Expect = 0.006
 Identities = 62/254 (24%), Positives = 96/254 (37%), Gaps = 43/254 (16%)

Query: 350 PAKVKVELASGVSSKGSVVKRNQQPVTTEQNSSKENASKLTLENSEAVSQLLNVAPPREV 409
           P K    LA+   +K S  K   QP +  +  +      L  +     S L+  APP+  
Sbjct: 432 PEKKTKPLATTQPAKTSTSKAKTQPTSLPKQPAPTTIGGLNKKPMSLASGLVPAAPPKRP 491

Query: 410 GEESEWEEVI---------ISDAHVLVKEA-PGNCGTAVTKTPVVKSGVQPEVTLGTTDN 459
              S    ++         I+DA    K A P    +A    P  +SG +   T+  T  
Sbjct: 492 AVASARPSILPSKDVKPKPIADAKAPEKRASPSKPASA----PASRSGSKSTQTVAKTTT 547

Query: 460 DSPGADVPTPSEGTSTSSPLP-APKKPTGVDLLTPGSRAPELKGRARGKPSLLAAARPMR 518
            +  A     S G S+ SP    PKKPT +              +  GKP   A  + M 
Sbjct: 548 AAAVA-----STGPSSRSPSTLLPKKPTAI--------------KTEGKP---AEVKKMT 585

Query: 519 AILPAPVNVGRGSSMGLPRARQAFSLSDKTPSVRTCGLKPSTLKQLGQPIQQPSGPGEVK 578
           A    P ++ R  S      ++  +LS   P+    G+ PS +K    P +  + P   K
Sbjct: 586 A-KSVPADLSRPKSTSTSSMKKTTTLSGTAPA---AGVVPSRVKATPMPSRPSTTPFIDK 641

Query: 579 LPSG--PSNRTSQV 590
            P+   PS+ T ++
Sbjct: 642 KPTSAKPSSTTPRL 655


>gi|197276600 microtubule-associated protein 4 isoform 4 [Homo
           sapiens]
          Length = 1135

 Score = 41.2 bits (95), Expect = 0.006
 Identities = 62/254 (24%), Positives = 96/254 (37%), Gaps = 43/254 (16%)

Query: 350 PAKVKVELASGVSSKGSVVKRNQQPVTTEQNSSKENASKLTLENSEAVSQLLNVAPPREV 409
           P K    LA+   +K S  K   QP +  +  +      L  +     S L+  APP+  
Sbjct: 697 PEKKTKPLATTQPAKTSTSKAKTQPTSLPKQPAPTTIGGLNKKPMSLASGLVPAAPPKRP 756

Query: 410 GEESEWEEVI---------ISDAHVLVKEA-PGNCGTAVTKTPVVKSGVQPEVTLGTTDN 459
              S    ++         I+DA    K A P    +A    P  +SG +   T+  T  
Sbjct: 757 AVASARPSILPSKDVKPKPIADAKAPEKRASPSKPASA----PASRSGSKSTQTVAKTTT 812

Query: 460 DSPGADVPTPSEGTSTSSPLP-APKKPTGVDLLTPGSRAPELKGRARGKPSLLAAARPMR 518
            +  A     S G S+ SP    PKKPT +              +  GKP   A  + M 
Sbjct: 813 AAAVA-----STGPSSRSPSTLLPKKPTAI--------------KTEGKP---AEVKKMT 850

Query: 519 AILPAPVNVGRGSSMGLPRARQAFSLSDKTPSVRTCGLKPSTLKQLGQPIQQPSGPGEVK 578
           A    P ++ R  S      ++  +LS   P+    G+ PS +K    P +  + P   K
Sbjct: 851 A-KSVPADLSRPKSTSTSSMKKTTTLSGTAPA---AGVVPSRVKATPMPSRPSTTPFIDK 906

Query: 579 LPSG--PSNRTSQV 590
            P+   PS+ T ++
Sbjct: 907 KPTSAKPSSTTPRL 920


>gi|47519675 microtubule-associated protein 4 isoform 2 [Homo
           sapiens]
          Length = 887

 Score = 41.2 bits (95), Expect = 0.006
 Identities = 62/254 (24%), Positives = 96/254 (37%), Gaps = 43/254 (16%)

Query: 350 PAKVKVELASGVSSKGSVVKRNQQPVTTEQNSSKENASKLTLENSEAVSQLLNVAPPREV 409
           P K    LA+   +K S  K   QP +  +  +      L  +     S L+  APP+  
Sbjct: 432 PEKKTKPLATTQPAKTSTSKAKTQPTSLPKQPAPTTIGGLNKKPMSLASGLVPAAPPKRP 491

Query: 410 GEESEWEEVI---------ISDAHVLVKEA-PGNCGTAVTKTPVVKSGVQPEVTLGTTDN 459
              S    ++         I+DA    K A P    +A    P  +SG +   T+  T  
Sbjct: 492 AVASARPSILPSKDVKPKPIADAKAPEKRASPSKPASA----PASRSGSKSTQTVAKTTT 547

Query: 460 DSPGADVPTPSEGTSTSSPLP-APKKPTGVDLLTPGSRAPELKGRARGKPSLLAAARPMR 518
            +  A     S G S+ SP    PKKPT +              +  GKP   A  + M 
Sbjct: 548 AAAVA-----STGPSSRSPSTLLPKKPTAI--------------KTEGKP---AEVKKMT 585

Query: 519 AILPAPVNVGRGSSMGLPRARQAFSLSDKTPSVRTCGLKPSTLKQLGQPIQQPSGPGEVK 578
           A    P ++ R  S      ++  +LS   P+    G+ PS +K    P +  + P   K
Sbjct: 586 A-KSVPADLSRPKSTSTSSMKKTTTLSGTAPA---AGVVPSRVKATPMPSRPSTTPFIDK 641

Query: 579 LPSG--PSNRTSQV 590
            P+   PS+ T ++
Sbjct: 642 KPTSAKPSSTTPRL 655


>gi|47519639 microtubule-associated protein 4 isoform 1 [Homo
           sapiens]
          Length = 1152

 Score = 41.2 bits (95), Expect = 0.006
 Identities = 62/254 (24%), Positives = 96/254 (37%), Gaps = 43/254 (16%)

Query: 350 PAKVKVELASGVSSKGSVVKRNQQPVTTEQNSSKENASKLTLENSEAVSQLLNVAPPREV 409
           P K    LA+   +K S  K   QP +  +  +      L  +     S L+  APP+  
Sbjct: 697 PEKKTKPLATTQPAKTSTSKAKTQPTSLPKQPAPTTIGGLNKKPMSLASGLVPAAPPKRP 756

Query: 410 GEESEWEEVI---------ISDAHVLVKEA-PGNCGTAVTKTPVVKSGVQPEVTLGTTDN 459
              S    ++         I+DA    K A P    +A    P  +SG +   T+  T  
Sbjct: 757 AVASARPSILPSKDVKPKPIADAKAPEKRASPSKPASA----PASRSGSKSTQTVAKTTT 812

Query: 460 DSPGADVPTPSEGTSTSSPLP-APKKPTGVDLLTPGSRAPELKGRARGKPSLLAAARPMR 518
            +  A     S G S+ SP    PKKPT +              +  GKP   A  + M 
Sbjct: 813 AAAVA-----STGPSSRSPSTLLPKKPTAI--------------KTEGKP---AEVKKMT 850

Query: 519 AILPAPVNVGRGSSMGLPRARQAFSLSDKTPSVRTCGLKPSTLKQLGQPIQQPSGPGEVK 578
           A    P ++ R  S      ++  +LS   P+    G+ PS +K    P +  + P   K
Sbjct: 851 A-KSVPADLSRPKSTSTSSMKKTTTLSGTAPA---AGVVPSRVKATPMPSRPSTTPFIDK 906

Query: 579 LPSG--PSNRTSQV 590
            P+   PS+ T ++
Sbjct: 907 KPTSAKPSSTTPRL 920


>gi|7662322 thymus high mobility group box protein TOX [Homo
           sapiens]
          Length = 526

 Score = 41.2 bits (95), Expect = 0.006
 Identities = 22/75 (29%), Positives = 40/75 (53%), Gaps = 2/75 (2%)

Query: 26  PGPPKKKKKYKIHGEKTKKPRSAYLLYYYDIYLKVQQELPHLPQSEINKKISESWRLLSV 85
           P  PKKKKK   +  + +KP SAY L++ D    ++ + P+    E++K ++  W  L  
Sbjct: 247 PKTPKKKKKKDPN--EPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDGLGE 304

Query: 86  AERSYYLEKAKLEKE 100
            ++  Y +K +  K+
Sbjct: 305 EQKQVYKKKTEAAKK 319


>gi|71143137 high-mobility group box 3 [Homo sapiens]
          Length = 200

 Score = 41.2 bits (95), Expect = 0.006
 Identities = 27/86 (31%), Positives = 42/86 (48%), Gaps = 6/86 (6%)

Query: 27  GPPKKKKKYKIHGEKTKKPRSAYLLYYYDIYLKVQQELPHLPQSEINKKISESWRLLSVA 86
           GP K  KK K      K+P S + L+  +   K++   P +   ++ KK+ E W  L+ +
Sbjct: 79  GPAKGGKKKK-DPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLNDS 137

Query: 87  ERSYYLEKA-----KLEKEGLDPNSK 107
           E+  Y+ KA     K EK+  D  SK
Sbjct: 138 EKQPYITKAAKLKEKYEKDVADYKSK 163



 Score = 35.4 bits (80), Expect = 0.36
 Identities = 22/70 (31%), Positives = 36/70 (51%), Gaps = 2/70 (2%)

Query: 40  EKTKKPRSAYLLYYYDIYLKVQQELPHLPQS--EINKKISESWRLLSVAERSYYLEKAKL 97
           +K K   SAY  +      + +++ P +P +  E +KK SE W+ +S  E+S + E AK 
Sbjct: 7   KKPKGKMSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKA 66

Query: 98  EKEGLDPNSK 107
           +K   D   K
Sbjct: 67  DKVRYDREMK 76


>gi|5902106 SRY-box 15 [Homo sapiens]
          Length = 233

 Score = 41.2 bits (95), Expect = 0.006
 Identities = 18/57 (31%), Positives = 36/57 (63%)

Query: 40  EKTKKPRSAYLLYYYDIYLKVQQELPHLPQSEINKKISESWRLLSVAERSYYLEKAK 96
           EK K+P +A++++      ++ Q+ P +  SEI+K++   W+LL   E+  ++E+AK
Sbjct: 47  EKVKRPMNAFMVWSSAQRRQMAQQNPKMHNSEISKRLGAQWKLLDEDEKRPFVEEAK 103


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.314    0.130    0.382 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 54,203,805
Number of Sequences: 37866
Number of extensions: 2742013
Number of successful extensions: 9343
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 106
Number of HSP's successfully gapped in prelim test: 201
Number of HSP's that attempted gapping in prelim test: 8472
Number of HSP's gapped (non-prelim): 850
length of query: 1292
length of database: 18,247,518
effective HSP length: 114
effective length of query: 1178
effective length of database: 13,930,794
effective search space: 16410475332
effective search space used: 16410475332
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 68 (30.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.