LOC729595 1169

Name: LOC729595	Sequence: fasta or formatted (201aa)		NCBI GI: 113416897
Description: PREDICTED: similar to high mobility group box 3 isoform 1		Referenced in: Nonhistone Chromosomal Proteins
Other entries for this name: alt prot [204aa] PREDICTED: similar to high mobility group box 3 alt prot [204aa] PREDICTED: similar to high mobility group box 3 alt prot [183aa] PREDICTED: similar to high mobility group box 3 isoform 2
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.5 11 1 C cysteine 2.0 4 1 D aspartate 6.0 12 1 E glutamate 9.5 19 3 F phenylalanine 4.5 9 2 G glycine 6.0 12 2 H histidine 0.5 1 1 I isoleucine 2.5 5 1 K lysine 22.4 45 4 L leucine 2.5 5 1 M methionine 4.0 8 1 N asparagine 3.5 7 2 P proline 6.0 12 2 Q glutamine 1.5 3 1 R arginine 4.5 9 3 S serine 8.5 17 2 T threonine 3.0 6 1 V valine 4.5 9 1 W tryptophan 1.5 3 1 Y tyrosine 2.0 4 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: similar to high mobility group box 3 iso... LOC729595 1.000 PREDICTED: similar to high mobility group box 3 [Ho... LOC729595 1.000 PREDICTED: similar to high mobility group box 3 [Ho... LOC729595 0.805 PREDICTED: similar to high mobility group box 3 iso... HMGB3 0.800 high-mobility group box 3 LOC441795 0.721 PREDICTED: high mobility group protein B3-like prot... LOC441795 0.721 PREDICTED: high mobility group protein B3-like prot... LOC646993 0.713 PREDICTED: similar to high mobility group box 3 [Ho... LOC646993 0.713 PREDICTED: similar to high mobility group box 3 [Ho... LOC646993 0.713 PREDICTED: similar to high mobility group box 3 [Ho... LOC203510 0.672 PREDICTED: similar to hCG1644442 LOC203510 0.672 PREDICTED: similar to hCG1644442 LOC203510 0.672 PREDICTED: hypothetical protein LOC203510 HMGB2 0.582 high-mobility group box 2 HMGB2 0.582 high-mobility group box 2 HMGB2 0.582 high-mobility group box 2 HMGB1 0.579 high-mobility group box 1 HMGB1L1 0.554 high-mobility group box 1-like 1 LOC645490 0.415 PREDICTED: similar to hCG1991922 LOC645490 0.415 PREDICTED: similar to hCG1991922 LOC645490 0.415 PREDICTED: similar to hCG1991922 SP100 0.410 nuclear antigen Sp100 isoform 2 HMGB4 0.249 HMG2 like isoform 1 LOC644129 0.241 PREDICTED: similar to hCG1647425 LOC644129 0.241 PREDICTED: similar to hCG1647425 LOC644129 0.221 PREDICTED: similar to hCG1647425 SSRP1 0.146 structure specific recognition protein 1 TOX4 0.118 epidermal Langerhans cell protein LCP1 TOX 0.115 thymus high mobility group box protein TOX TOX2 0.115 TOX high mobility group box family member 2 isoform... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.