HMG20B 36466

Name: HMG20B	Sequence: fasta or formatted (317aa)		NCBI GI: 83715964
Description: high-mobility group 20B		Referenced in: Nonhistone Chromosomal Proteins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.8 28 4 C cysteine 0.6 2 1 D aspartate 2.8 9 1 E glutamate 11.0 35 3 F phenylalanine 3.2 10 1 G glycine 7.9 25 2 H histidine 2.8 9 1 I isoleucine 3.2 10 1 K lysine 8.8 28 2 L leucine 8.8 28 2 M methionine 2.5 8 1 N asparagine 2.2 7 1 P proline 6.0 19 1 Q glutamine 7.3 23 3 R arginine 7.9 25 2 S serine 4.4 14 3 T threonine 5.0 16 1 V valine 4.1 13 2 W tryptophan 0.6 2 1 Y tyrosine 1.9 6 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 high-mobility group 20B HMG20A 0.440 high-mobility group 20A TOX3 0.080 TOX high mobility group box family member 3 isoform... TOX3 0.080 TOX high mobility group box family member 3 isoform... LOC441795 0.077 PREDICTED: high mobility group protein B3-like prot... LOC441795 0.077 PREDICTED: high mobility group protein B3-like prot... TOX 0.075 thymus high mobility group box protein TOX HMGB3 0.075 high-mobility group box 3 HMGB1 0.074 high-mobility group box 1 SP100 0.074 nuclear antigen Sp100 isoform 2 HMGB1L1 0.072 high-mobility group box 1-like 1 TOX2 0.070 TOX high mobility group box family member 2 isoform... TOX2 0.070 TOX high mobility group box family member 2 isoform... TOX2 0.070 TOX high mobility group box family member 2 isoform ... HMGB2 0.069 high-mobility group box 2 HMGB2 0.069 high-mobility group box 2 HMGB2 0.069 high-mobility group box 2 TOX4 0.069 epidermal Langerhans cell protein LCP1 SMARCE1 0.067 SWI/SNF-related matrix-associated actin-dependent re... LOC646993 0.065 PREDICTED: similar to high mobility group box 3 [Ho... LOC646993 0.065 PREDICTED: similar to high mobility group box 3 [Ho... LOC646993 0.065 PREDICTED: similar to high mobility group box 3 [Ho... LOC729595 0.064 PREDICTED: similar to high mobility group box 3 [Ho... LOC729595 0.064 PREDICTED: similar to high mobility group box 3 [Ho... LOC729595 0.064 PREDICTED: similar to high mobility group box 3 iso... LOC729595 0.064 PREDICTED: similar to high mobility group box 3 iso... UBTF 0.061 upstream binding transcription factor, RNA polymera... UBTF 0.061 upstream binding transcription factor, RNA polymera... UBTF 0.061 upstream binding transcription factor, RNA polymerase... SSRP1 0.061 structure specific recognition protein 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.