Guide to the Human Genome
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Name: KIAA0754 Sequence: fasta or formatted (1427aa) NCBI GI: 149773456
Description:

hypothetical protein LOC643314

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            12.5        179           3
 C cysteine            1.4         20           2
 D aspartate           4.8         68           2
 E glutamate          12.5        178           3
 F phenylalanine       2.7         38           1
 G glycine             4.4         63           2
 H histidine           1.7         24           1
 I isoleucine          2.8         40           2
 K lysine              3.3         47           2
 L leucine             7.3        104           2
 M methionine          1.3         18           2
 N asparagine          2.7         39           2
 P proline            10.9        155           3
 Q glutamine           2.7         38           2
 R arginine            2.9         41           3
 S serine              9.9        141           3
 T threonine           7.1        102           2
 V valine              8.1        116           2
 W tryptophan          0.6          9           2
 Y tyrosine            0.5          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hypothetical protein LOC643314 
NACA                  0.055   nascent polypeptide-associated complex alpha subuni...
PRG4                  0.053   proteoglycan 4 isoform D 
PRG4                  0.053   proteoglycan 4 isoform C 
PRG4                  0.053   proteoglycan 4 isoform B 
PRG4                  0.053   proteoglycan 4 isoform A 
FMN2                  0.043   formin 2 
MUC2                  0.040   mucin 2 precursor 
LOC647546             0.040   PREDICTED: hypothetical protein 
FLJ22184              0.038   PREDICTED: hypothetical protein FLJ22184 
TTN                   0.037   titin isoform N2-A 
FLJ22184              0.035   PREDICTED: hypothetical protein FLJ22184 
MLL2                  0.034   myeloid/lymphoid or mixed-lineage leukemia 2 
FLJ22184              0.032   PREDICTED: hypothetical protein LOC80164 
LOC100294420          0.032   PREDICTED: similar to mucin 2 
ZAN                   0.031   zonadhesin isoform 3 
ZAN                   0.031   zonadhesin isoform 6 
NEFH                  0.030   neurofilament, heavy polypeptide 200kDa 
MUC17                 0.030   mucin 17 
FSCB                  0.029   fibrous sheath CABYR binding protein 
DPCR1                 0.029   diffuse panbronchiolitis critical region 1 protein ...
LOC100294236          0.028   PREDICTED: similar to diffuse panbronchiolitis crit...
WNK2                  0.028   WNK lysine deficient protein kinase 2 
RAPH1                 0.028   Ras association and pleckstrin homology domains 1 is...
SRCAP                 0.028   Snf2-related CBP activator protein 
PCLO                  0.028   piccolo isoform 2 
PCLO                  0.028   piccolo isoform 1 
TAF4                  0.028   TBP-associated factor 4 
GLTSCR1               0.027   glioma tumor suppressor candidate region gene 1 [Ho...
CIC                   0.027   capicua homolog 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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