LOC100292628 22509

Name: LOC100292628	Sequence: fasta or formatted (187aa)		NCBI GI: 239755717
Description: PREDICTED: hypothetical protein		Not currently referenced in the text
Composition: Amino acid Percentage Count Longest homopolymer A alanine 3.2 6 1 C cysteine 1.6 3 1 D aspartate 1.6 3 1 E glutamate 6.4 12 1 F phenylalanine 5.3 10 2 G glycine 11.8 22 2 H histidine 2.7 5 2 I isoleucine 0.0 0 0 K lysine 4.8 9 1 L leucine 16.6 31 7 M methionine 0.5 1 1 N asparagine 1.1 2 1 P proline 11.2 21 7 Q glutamine 2.7 5 1 R arginine 4.8 9 2 S serine 14.4 27 7 T threonine 6.4 12 1 V valine 2.1 4 1 W tryptophan 2.1 4 1 X unknown 0.5 1 1 Y tyrosine 0.0 0 0			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: hypothetical protein LOC100288635 0.850 PREDICTED: hypothetical protein LOC100288635 0.850 PREDICTED: hypothetical protein XP_002343184 COL27A1 0.047 collagen, type XXVII, alpha 1 COL22A1 0.044 collagen, type XXII, alpha 1 KRBA1 0.044 KRAB A domain containing 1 COL6A2 0.042 alpha 2 type VI collagen isoform 2C2a' precursor [H... COL6A2 0.042 alpha 2 type VI collagen isoform 2C2a precursor [Ho... COL6A2 0.042 alpha 2 type VI collagen isoform 2C2 precursor [Hom... COL4A3 0.042 alpha 3 type IV collagen isoform 5 precursor COL4A3 0.042 alpha 3 type IV collagen isoform 4 precursor COL4A3 0.042 alpha 3 type IV collagen isoform 2 precursor COL4A3 0.042 alpha 3 type IV collagen isoform 1 precursor COL11A1 0.039 alpha 1 type XI collagen isoform B preproprotein [Ho... COL11A1 0.039 alpha 1 type XI collagen isoform C preproprotein [Ho... COL11A1 0.039 alpha 1 type XI collagen isoform A preproprotein [Ho... LOC100293055 0.039 PREDICTED: similar to COL22A1 protein NRXN2 0.039 neurexin 2 isoform beta precursor GLDN 0.039 gliomedin COL5A1 0.036 alpha 1 type V collagen preproprotein COL6A6 0.036 collagen type VI alpha 6 COL7A1 0.036 alpha 1 type VII collagen precursor COL9A2 0.036 alpha 2 type IX collagen C1QTNF7 0.033 C1q and tumor necrosis factor related protein 7 isof... C1QTNF7 0.033 C1q and tumor necrosis factor related protein 7 iso... C1QTNF7 0.033 C1q and tumor necrosis factor related protein 7 iso... COL4A4 0.033 alpha 4 type IV collagen precursor COL6A3 0.033 alpha 3 type VI collagen isoform 5 precursor COL6A3 0.033 alpha 3 type VI collagen isoform 1 precursor COL6A3 0.033 alpha 3 type VI collagen isoform 4 precursor Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.