LOC100291609 22085

Name: LOC100291609	Sequence: fasta or formatted (368aa)		NCBI GI: 239754651
Description: PREDICTED: hypothetical protein XP_002346061		Not currently referenced in the text
Composition: Amino acid Percentage Count Longest homopolymer A alanine 14.7 54 11 C cysteine 1.1 4 1 D aspartate 3.5 13 2 E glutamate 6.8 25 2 F phenylalanine 0.5 2 1 G glycine 14.9 55 3 H histidine 2.7 10 1 I isoleucine 1.1 4 1 K lysine 1.1 4 1 L leucine 5.2 19 2 M methionine 1.4 5 1 N asparagine 0.8 3 1 P proline 12.0 44 2 Q glutamine 3.3 12 2 R arginine 7.3 27 3 S serine 10.1 37 4 T threonine 3.0 11 2 V valine 8.4 31 3 W tryptophan 1.6 6 1 Y tyrosine 0.5 2 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: hypothetical protein XP_002346061 LOC100291121 0.656 PREDICTED: hypothetical protein XP_002346953 LOC100287259 0.656 PREDICTED: hypothetical protein XP_002342817 LOC100287259 0.656 PREDICTED: hypothetical protein TAF4 0.041 TBP-associated factor 4 COL2A1 0.036 collagen, type II, alpha 1 isoform 1 precursor [Hom... COL2A1 0.036 collagen, type II, alpha 1 isoform 2 precursor [Hom... GNAS 0.036 GNAS complex locus XLas COL17A1 0.034 alpha 1 type XVII collagen COL5A1 0.033 alpha 1 type V collagen preproprotein COL1A1 0.032 alpha 1 type I collagen preproprotein COL8A2 0.032 collagen, type VIII, alpha 2 CASKIN1 0.030 CASK interacting protein 1 COL3A1 0.030 collagen type III alpha 1 preproprotein SAMD1 0.030 sterile alpha motif domain containing 1 NKX6-1 0.030 NK6 transcription factor related, locus 1 CPSF6 0.029 cleavage and polyadenylation specific factor 6, 68 ... CKAP4 0.028 cytoskeleton-associated protein 4 COL16A1 0.028 alpha 1 type XVI collagen precursor COL7A1 0.028 alpha 1 type VII collagen precursor PHOX2B 0.028 paired-like homeobox 2b TPRX1 0.028 tetra-peptide repeat homeobox COL11A1 0.028 alpha 1 type XI collagen isoform B preproprotein [Ho... COL11A1 0.028 alpha 1 type XI collagen isoform C preproprotein [Ho... COL11A1 0.028 alpha 1 type XI collagen isoform A preproprotein [Ho... SNRPB 0.028 small nuclear ribonucleoprotein polypeptide B/B' iso... SNRPB 0.028 small nuclear ribonucleoprotein polypeptide B/B' isof... COL13A1 0.028 alpha 1 type XIII collagen isoform 19 COL13A1 0.028 alpha 1 type XIII collagen isoform 15 BSN 0.026 bassoon protein Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.