LOC100287259 17563

Name: LOC100287259	Sequence: fasta or formatted (261aa)		NCBI GI: 239743285
Description: PREDICTED: hypothetical protein XP_002342817		Not currently referenced in the text
Other entries for this name: alt mRNA {261aa} PREDICTED: hypothetical protein
Composition: Amino acid Percentage Count Longest homopolymer A alanine 9.6 25 2 C cysteine 1.5 4 1 D aspartate 3.4 9 2 E glutamate 8.0 21 2 F phenylalanine 0.0 0 0 G glycine 15.7 41 2 H histidine 2.7 7 1 I isoleucine 1.5 4 1 K lysine 1.1 3 1 L leucine 6.1 16 2 M methionine 1.1 3 1 N asparagine 1.1 3 1 P proline 10.7 28 2 Q glutamine 3.1 8 2 R arginine 6.5 17 2 S serine 8.8 23 4 T threonine 5.0 13 2 V valine 11.5 30 3 W tryptophan 1.9 5 1 Y tyrosine 0.4 1 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: hypothetical protein XP_002342817 LOC100291121 1.000 PREDICTED: hypothetical protein XP_002346953 LOC100287259 1.000 PREDICTED: hypothetical protein LOC100291609 0.930 PREDICTED: hypothetical protein XP_002346061 COL8A2 0.029 collagen, type VIII, alpha 2 BSN 0.025 bassoon protein WEE1 0.025 WEE1 tyrosine kinase isoform 1 COL7A1 0.023 alpha 1 type VII collagen precursor ARVCF 0.023 armadillo repeat protein COL17A1 0.021 alpha 1 type XVII collagen ABCA7 0.019 ATP-binding cassette, sub-family A, member 7 LOC727962 0.019 PREDICTED: similar to collagen, type I, alpha 2 [Ho... RPGR 0.019 retinitis pigmentosa GTPase regulator isoform C [Hom... CLIC6 0.019 chloride intracellular channel 6 FUSSEL18 0.018 PREDICTED: functional smad suppressing element 18 [... FUSSEL18 0.018 PREDICTED: functional smad suppressing element 18 [... LOC653203 0.018 PREDICTED: hypothetical protein FUSSEL18 0.018 PREDICTED: functional smad suppressing element 18 [... COL16A1 0.018 alpha 1 type XVI collagen precursor PIK3R1 0.018 phosphoinositide-3-kinase, regulatory subunit 1 (alp... COL4A2 0.018 alpha 2 type IV collagen preproprotein CBX6 0.016 chromobox homolog 6 LOC729983 0.016 PREDICTED: hypothetical protein COL2A1 0.016 collagen, type II, alpha 1 isoform 1 precursor [Hom... COL2A1 0.016 collagen, type II, alpha 1 isoform 2 precursor [Hom... SF3B4 0.016 splicing factor 3b, subunit 4 BTBD12 0.016 BTB (POZ) domain containing 12 ZNF213 0.016 zinc finger protein 213 ZNF213 0.016 zinc finger protein 213 COL5A2 0.014 alpha 2 type V collagen preproprotein Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.