LOC100293267 21560

Name: LOC100293267	Sequence: fasta or formatted (191aa)		NCBI GI: 239753301
Description: PREDICTED: hypothetical protein		Not currently referenced in the text
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.3 12 2 C cysteine 1.6 3 2 D aspartate 1.6 3 1 E glutamate 6.8 13 3 F phenylalanine 1.6 3 1 G glycine 15.7 30 1 H histidine 3.1 6 1 I isoleucine 0.5 1 1 K lysine 4.2 8 1 L leucine 12.6 24 2 M methionine 2.1 4 1 N asparagine 1.0 2 1 P proline 11.0 21 2 Q glutamine 6.8 13 1 R arginine 5.2 10 1 S serine 9.9 19 2 T threonine 2.6 5 1 V valine 1.6 3 1 W tryptophan 5.8 11 1 Y tyrosine 0.0 0 0			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: hypothetical protein LOC100292164 0.730 PREDICTED: hypothetical protein LOC100289081 0.531 PREDICTED: hypothetical protein XP_002342086 PRR19 0.036 proline rich 19 COLQ 0.026 acetylcholinesterase collagen-like tail subunit isof... COLQ 0.026 acetylcholinesterase collagen-like tail subunit isof... C1orf127 0.023 hypothetical protein LOC148345 COL16A1 0.023 alpha 1 type XVI collagen precursor COL7A1 0.020 alpha 1 type VII collagen precursor COL4A5 0.018 type IV collagen alpha 5 isoform 2 precursor COL4A5 0.018 type IV collagen alpha 5 isoform 1 precursor COL4A5 0.018 type IV collagen alpha 5 isoform 3 precursor BAT2 0.018 HLA-B associated transcript-2 COL4A2 0.018 alpha 2 type IV collagen preproprotein COLQ 0.018 acetylcholinesterase collagen-like tail subunit iso... COL2A1 0.018 collagen, type II, alpha 1 isoform 1 precursor [Hom... COL2A1 0.018 collagen, type II, alpha 1 isoform 2 precursor [Hom... DNAJC6 0.018 DnaJ (Hsp40) homolog, subfamily C, member 6 LOC100291878 0.015 PREDICTED: similar to RIKEN cDNA C230030N03 LOC648262 0.015 PREDICTED: hypothetical protein COL24A1 0.015 collagen, type XXIV, alpha 1 COL27A1 0.015 collagen, type XXVII, alpha 1 TAOK1 0.015 TAO kinase 1 COL13A1 0.015 alpha 1 type XIII collagen isoform 20 COL13A1 0.015 alpha 1 type XIII collagen isoform 19 COL13A1 0.015 alpha 1 type XIII collagen isoform 18 COL13A1 0.015 alpha 1 type XIII collagen isoform 17 COL13A1 0.015 alpha 1 type XIII collagen isoform 16 COL13A1 0.015 alpha 1 type XIII collagen isoform 15 COL13A1 0.015 alpha 1 type XIII collagen isoform 14 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.