LOC648262 21466

Name: LOC648262	Sequence: fasta or formatted (811aa)		NCBI GI: 239753062
Description: PREDICTED: hypothetical protein		Referenced in: SOX Family
Other entries for this name: alt prot [441aa] PREDICTED: similar to hCG1996386 alt prot [441aa] PREDICTED: similar to hCG1996386
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.9 72 2 C cysteine 2.7 22 1 D aspartate 4.2 34 1 E glutamate 4.3 35 2 F phenylalanine 2.6 21 1 G glycine 9.9 80 2 H histidine 3.0 24 1 I isoleucine 1.7 14 1 K lysine 2.8 23 1 L leucine 9.1 74 3 M methionine 2.3 19 1 N asparagine 2.5 20 2 P proline 9.4 76 2 Q glutamine 5.1 41 2 R arginine 4.9 40 2 S serine 10.4 84 3 T threonine 5.8 47 2 V valine 5.5 45 2 W tryptophan 2.8 23 2 Y tyrosine 2.1 17 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: hypothetical protein LOC100288667 0.694 PREDICTED: hypothetical protein XP_002344293 LOC100130600 0.659 PREDICTED: similar to hCG2014367 LOC100130600 0.656 PREDICTED: hypothetical protein LOC100130600 LOC100130600 0.656 PREDICTED: similar to hCG2014367 LOC100130600 0.655 PREDICTED: similar to hCG2014367 LOC648262 0.321 PREDICTED: similar to hCG1996386 LOC648262 0.321 PREDICTED: similar to hCG1996386 LOC100289067 0.236 PREDICTED: hypothetical protein XP_002342619 CIC 0.111 capicua homolog LOC442676 0.082 PREDICTED: hypothetical protein LOC442676 LOC442676 0.082 PREDICTED: hypothetical protein LOC442676 LOC442676 0.081 PREDICTED: hypothetical protein LOC442676 LOC442676 0.081 PREDICTED: hypothetical protein LOC442676 MUC12 0.008 PREDICTED: mucin 12 MUC12 0.008 PREDICTED: mucin 12, cell surface associated BBX 0.007 HMG-BOX transcription factor BBX isoform 1 BBX 0.007 HMG-BOX transcription factor BBX isoform 2 MUPCDH 0.006 mucin and cadherin-like isoform 1 LOC100292589 0.006 PREDICTED: hypothetical protein LOC100290121 0.006 PREDICTED: hypothetical protein XP_002346879 LOC100289406 0.006 PREDICTED: hypothetical protein XP_002342721 TMPRSS13 0.006 transmembrane protease, serine 13 TNRC6C 0.006 trinucleotide repeat containing 6C isoform 1 TNRC6C 0.006 trinucleotide repeat containing 6C isoform 2 KIAA1602 0.006 hypothetical protein LOC57701 GRIN2D 0.005 N-methyl-D-aspartate receptor subunit 2D precursor ... SPEG 0.005 SPEG complex locus ULK1 0.005 Unc-51-like kinase 1 LOC100134152 0.005 PREDICTED: similar to synaptotagmin XV-b Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.