LOC100291529 20909

Name: LOC100291529	Sequence: fasta or formatted (72aa)		NCBI GI: 239751657
Description: PREDICTED: hypothetical protein XP_002347944		Not currently referenced in the text
Composition: Amino acid Percentage Count Longest homopolymer A alanine 15.3 11 2 C cysteine 4.2 3 1 D aspartate 1.4 1 1 E glutamate 2.8 2 1 F phenylalanine 0.0 0 0 G glycine 13.9 10 1 H histidine 1.4 1 1 I isoleucine 1.4 1 1 K lysine 0.0 0 0 L leucine 6.9 5 1 M methionine 2.8 2 1 N asparagine 2.8 2 1 P proline 15.3 11 2 Q glutamine 1.4 1 1 R arginine 18.1 13 2 S serine 1.4 1 1 T threonine 5.6 4 1 V valine 4.2 3 1 W tryptophan 1.4 1 1 Y tyrosine 0.0 0 0			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: hypothetical protein XP_002347944 LOC100292335 1.000 PREDICTED: hypothetical protein LOC100289333 1.000 PREDICTED: hypothetical protein XP_002343666 COL4A1 0.061 alpha 1 type IV collagen preproprotein GHDC 0.053 LGP1 homolog isoform 1 GHDC 0.053 LGP1 homolog isoform 3 GHDC 0.053 LGP1 homolog isoform 2 COL6A1 0.053 collagen, type VI, alpha 1 precursor COL6A3 0.053 alpha 3 type VI collagen isoform 5 precursor COL6A3 0.053 alpha 3 type VI collagen isoform 1 precursor COL6A3 0.053 alpha 3 type VI collagen isoform 4 precursor COL8A2 0.053 collagen, type VIII, alpha 2 COL11A2 0.053 collagen, type XI, alpha 2 isoform 2 preproprotein ... COL11A2 0.053 collagen, type XI, alpha 2 isoform 3 preproprotein ... COL11A2 0.053 collagen, type XI, alpha 2 isoform 1 preproprotein ... COL11A1 0.046 alpha 1 type XI collagen isoform B preproprotein [Ho... COL11A1 0.046 alpha 1 type XI collagen isoform C preproprotein [Ho... COL11A1 0.046 alpha 1 type XI collagen isoform A preproprotein [Ho... COL7A1 0.046 alpha 1 type VII collagen precursor COL18A1 0.046 alpha 1 type XVIII collagen isoform 3 precursor [Ho... COL18A1 0.046 alpha 1 type XVIII collagen isoform 2 precursor [Ho... COL18A1 0.046 alpha 1 type XVIII collagen isoform 1 precursor [Ho... SNRPB 0.046 small nuclear ribonucleoprotein polypeptide B/B' iso... SNRPB 0.046 small nuclear ribonucleoprotein polypeptide B/B' isof... COL1A1 0.046 alpha 1 type I collagen preproprotein COL2A1 0.046 collagen, type II, alpha 1 isoform 1 precursor [Hom... COL2A1 0.046 collagen, type II, alpha 1 isoform 2 precursor [Hom... LOC100293848 0.046 PREDICTED: hypothetical protein LOC100290829 0.046 PREDICTED: hypothetical protein XP_002346522 LOC100288535 0.046 PREDICTED: hypothetical protein XP_002342360 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.