GHDC 13672

Name: GHDC	Sequence: fasta or formatted (474aa)		NCBI GI: 217330596
Description: LGP1 homolog isoform 3		Not currently referenced in the text
Other entries for this name: alt prot {530aa} LGP1 homolog isoform 1 alt prot {491aa} LGP1 homolog isoform 2
Composition: Amino acid Percentage Count Longest homopolymer A alanine 11.6 55 2 C cysteine 2.1 10 1 D aspartate 3.6 17 1 E glutamate 6.1 29 2 F phenylalanine 1.7 8 2 G glycine 9.1 43 2 H histidine 1.7 8 1 I isoleucine 1.5 7 1 K lysine 1.5 7 1 L leucine 17.7 84 8 M methionine 0.4 2 1 N asparagine 1.5 7 1 P proline 6.5 31 2 Q glutamine 7.0 33 3 R arginine 7.8 37 3 S serine 5.1 24 2 T threonine 5.9 28 2 V valine 5.3 25 3 W tryptophan 2.7 13 1 Y tyrosine 1.3 6 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 LGP1 homolog isoform 3 GHDC 0.896 LGP1 homolog isoform 1 GHDC 0.795 LGP1 homolog isoform 2 ARHGEF1 0.012 Rho guanine nucleotide exchange factor 1 isoform 1 [... ARHGEF1 0.012 Rho guanine nucleotide exchange factor 1 isoform 3 [... ARHGEF1 0.012 Rho guanine nucleotide exchange factor 1 isoform 2 [... LOC100291040 0.011 PREDICTED: hypothetical protein XP_002347839 ACBD4 0.009 acyl-Coenzyme A binding domain containing 4 isoform... ACBD4 0.009 acyl-Coenzyme A binding domain containing 4 isoform ... LOC100292335 0.008 PREDICTED: hypothetical protein LOC100291529 0.008 PREDICTED: hypothetical protein XP_002347944 LOC100289333 0.008 PREDICTED: hypothetical protein XP_002343666 RNF39 0.008 ring finger protein 39 isoform 1 WNK2 0.008 WNK lysine deficient protein kinase 2 LRRC55 0.008 leucine rich repeat containing 55 SON 0.006 SON DNA-binding protein isoform F SON 0.006 SON DNA-binding protein isoform B EDC4 0.006 autoantigen RCD8 CAMK2A 0.005 calcium/calmodulin-dependent protein kinase II alpha... CAMK2A 0.005 calcium/calmodulin-dependent protein kinase II alpha... LOC100291176 0.005 PREDICTED: hypothetical protein XP_002346954 BAT2 0.005 HLA-B associated transcript-2 MUC4 0.005 mucin 4 isoform a HERC1 0.005 guanine nucleotide exchange factor p532 NOD2 0.004 nucleotide-binding oligomerization domain containing... GREB1 0.004 GREB1 protein isoform a Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.