| Name: SPOCD1 | Sequence: fasta or formatted (1216aa) | NCBI GI: 47271475 | |
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Description: SPOC domain containing 1
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Referenced in:
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Composition:
Amino acid Percentage Count Longest homopolymer A alanine 8.0 97 2 C cysteine 2.9 35 1 D aspartate 4.9 59 2 E glutamate 6.2 76 2 F phenylalanine 1.6 19 1 G glycine 10.0 121 2 H histidine 2.1 26 2 I isoleucine 1.8 22 2 K lysine 3.5 43 2 L leucine 10.4 127 3 M methionine 2.0 24 1 N asparagine 1.5 18 1 P proline 11.6 141 3 Q glutamine 6.0 73 3 R arginine 7.3 89 2 S serine 9.7 118 3 T threonine 3.1 38 2 V valine 5.2 63 2 W tryptophan 1.2 15 1 Y tyrosine 1.0 12 2 |
Comparative genomics:
Search single species RefSeq proteins at NCBI
Search summary 
Figure data | ||
Related human proteins:Protein Relative score Description Self-match 1.000 SPOC domain containing 1 PHF3 0.068 PHD finger protein 3 DIDO1 0.033 death inducer-obliterator 1 isoform c DIDO1 0.033 death inducer-obliterator 1 isoform b LOC100289899 0.010 PREDICTED: hypothetical protein XP_002347041 TCEA1 0.010 transcription elongation factor A 1 isoform 1 TCEA1 0.010 transcription elongation factor A 1 isoform 2 TCEA2 0.010 transcription elongation factor A protein 2 isoform ... TCEA2 0.010 transcription elongation factor A protein 2 isoform a... COL1A1 0.009 alpha 1 type I collagen preproprotein RP1L1 0.009 retinitis pigmentosa 1-like 1 USP42 0.009 ubiquitin specific peptidase 42 COL5A3 0.009 collagen, type V, alpha 3 preproprotein COL23A1 0.008 collagen, type XXIII, alpha 1 COL3A1 0.008 collagen type III alpha 1 preproprotein NCOR2 0.008 nuclear receptor co-repressor 2 isoform 2 NCOR2 0.008 nuclear receptor co-repressor 2 isoform 1 ATN1 0.008 atrophin-1 ATN1 0.008 atrophin-1 NRG2 0.008 neuregulin 2 isoform 2 NRG2 0.008 neuregulin 2 isoform 4 NRG2 0.008 neuregulin 2 isoform 3 NRG2 0.008 neuregulin 2 isoform 1 NACA 0.008 nascent polypeptide-associated complex alpha subuni... VASP 0.008 vasodilator-stimulated phosphoprotein TTBK1 0.008 tau tubulin kinase 1 TCOF1 0.008 Treacher Collins-Franceschetti syndrome 1 isoform f... TCOF1 0.008 Treacher Collins-Franceschetti syndrome 1 isoform e... TCOF1 0.008 Treacher Collins-Franceschetti syndrome 1 isoform d... TCOF1 0.008 Treacher Collins-Franceschetti syndrome 1 isoform b ...Human BLASTP results (used to prepare the table) | |||
Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.
See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.
