TTF2 27620

Name: TTF2	Sequence: fasta or formatted (1162aa)		NCBI GI: 40807471
Description: transcription termination factor, RNA polymerase II		Referenced in: Nonhistone Chromosomal Proteins RNA Polymerase and General Transcription Factors
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.6 65 2 C cysteine 1.9 22 3 D aspartate 4.4 51 2 E glutamate 7.9 92 3 F phenylalanine 2.8 32 2 G glycine 6.2 72 2 H histidine 3.1 36 2 I isoleucine 3.4 40 2 K lysine 8.2 95 3 L leucine 11.3 131 3 M methionine 1.1 13 2 N asparagine 3.5 41 2 P proline 5.3 62 2 Q glutamine 6.5 76 2 R arginine 5.2 60 2 S serine 9.6 112 2 T threonine 5.3 62 3 V valine 6.1 71 2 W tryptophan 1.3 15 1 Y tyrosine 1.2 14 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 transcription termination factor, RNA polymerase II ... HLTF 0.101 helicase-like transcription factor HLTF 0.101 helicase-like transcription factor BTAF1 0.065 BTAF1 RNA polymerase II, B-TFIID transcription facto... RAD54B 0.064 RAD54 homolog B SMARCA1 0.062 SWI/SNF-related matrix-associated actin-dependent r... ERCC6L 0.061 excision repair protein ERCC6-like SMARCA1 0.059 SWI/SNF-related matrix-associated actin-dependent re... C9orf102 0.057 RAD26L hypothetical protein RAD54L 0.056 RAD54-like protein RAD54L 0.056 RAD54-like protein SMARCA5 0.055 SWI/SNF-related matrix-associated actin-dependent re... ERCC6 0.054 excision repair cross-complementing rodent repair def... SMARCAD1 0.054 SWI/SNF-related, matrix-associated actin-dependent ... HELLS 0.053 helicase, lymphoid-specific SMARCAD1 0.053 SWI/SNF-related, matrix-associated actin-dependent ... SMARCAD1 0.053 SWI/SNF-related, matrix-associated actin-dependent ... CHD2 0.051 chromodomain helicase DNA binding protein 2 isoform... CHD8 0.048 chromodomain helicase DNA binding protein 8 CHD1 0.047 chromodomain helicase DNA binding protein 1 CHD5 0.047 chromodomain helicase DNA binding protein 5 SMARCA4 0.046 SWI/SNF-related matrix-associated actin-dependent r... SMARCA4 0.046 SWI/SNF-related matrix-associated actin-dependent r... SMARCA4 0.046 SWI/SNF-related matrix-associated actin-dependent r... SMARCA4 0.046 SWI/SNF-related matrix-associated actin-dependent r... SMARCA4 0.046 SWI/SNF-related matrix-associated actin-dependent r... SMARCA4 0.046 SWI/SNF-related matrix-associated actin-dependent r... SMARCA4 0.046 SWI/SNF-related matrix-associated actin-dependent re... SMARCA2 0.046 SWI/SNF-related matrix-associated actin-dependent re... SMARCA2 0.046 SWI/SNF-related matrix-associated actin-dependent re... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.