Guide to the Human Genome
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Name: KIAA1853 Sequence: fasta or formatted (611aa) NCBI GI: 50083281
Description:

KIAA1853 protein

Referenced in:

Capping and Splicing

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.1         25           2
 C cysteine            1.3          8           1
 D aspartate           2.3         14           1
 E glutamate           4.4         27           2
 F phenylalanine       1.1          7           1
 G glycine             4.7         29           2
 H histidine           2.3         14           2
 I isoleucine          1.0          6           2
 K lysine              8.0         49           6
 L leucine             3.4         21           1
 M methionine          0.8          5           1
 N asparagine          1.6         10           2
 P proline             8.0         49           3
 Q glutamine           3.4         21           2
 R arginine           16.9        103           5
 S serine             26.5        162           6
 T threonine           5.2         32           2
 V valine              1.5          9           2
 W tryptophan          0.5          3           1
 Y tyrosine            2.8         17           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   KIAA1853 protein 
FLJ37078              0.157   hypothetical protein LOC222183 
SRRM2                 0.120   splicing coactivator subunit SRm300 
LOC100170229          0.080   hypothetical protein LOC100170229 
SRRM1                 0.078   serine/arginine repetitive matrix 1 
NKTR                  0.068   natural killer-tumor recognition sequence 
GPATCH8               0.064   G patch domain containing 8 
SFRS4                 0.064   splicing factor, arginine/serine-rich 4 
PRPF4B                0.060   serine/threonine-protein kinase PRP4K 
PPIG                  0.055   peptidylprolyl isomerase G 
FLG                   0.055   filaggrin 
DSPP                  0.054   dentin sialophosphoprotein preproprotein 
SON                   0.052   SON DNA-binding protein isoform F 
SON                   0.052   SON DNA-binding protein isoform B 
ZC3H13                0.050   zinc finger CCCH-type containing 13 
SFRS2B                0.050   splicing factor, arginine/serine-rich 2B 
C2orf16               0.049   hypothetical protein LOC84226 
SFRS11                0.049   splicing factor, arginine/serine-rich 11 
ZC3H18                0.049   zinc finger CCCH-type containing 18 
SFRS12                0.048   splicing factor, arginine/serine-rich 12 isoform a ...
SFRS12                0.048   splicing factor, arginine/serine-rich 12 isoform b [...
PRPF38B               0.046   PRP38 pre-mRNA processing factor 38 (yeast) domain ...
RSRC2                 0.046   arginine/serine-rich coiled-coil 2 isoform a 
SFRS16                0.046   splicing factor, arginine/serine-rich 16 
SFRS18                0.046   splicing factor, arginine/serine-rich 130 
CHERP                 0.046   calcium homeostasis endoplasmic reticulum protein [...
SFRS18                0.046   splicing factor, arginine/serine-rich 130 
SFRS6                 0.044   arginine/serine-rich splicing factor 6 
CRKRS                 0.043   Cdc2-related kinase, arginine/serine-rich isoform 2...
CRKRS                 0.043   Cdc2-related kinase, arginine/serine-rich isoform 1...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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