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Search of human proteins with 239749318
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239749318 PREDICTED: hypothetical protein XP_002346994 [Homo
sapiens]
(171 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239749318 PREDICTED: hypothetical protein XP_002346994 [Homo ... 354 2e-98
gi|9966913 actin-related protein 3-beta isoform 1 [Homo sapiens] 211 2e-55
gi|5031573 ARP3 actin-related protein 3 homolog [Homo sapiens] 201 3e-52
gi|92373393 actin-related protein 3-beta isoform 2 [Homo sapiens] 74 6e-14
gi|169160859 PREDICTED: similar to actin, gamma 1 [Homo sapiens] 60 7e-10
gi|5031569 ARP1 actin-related protein 1 homolog A, centractin al... 60 7e-10
gi|11342680 ARP1 actin-related protein 1 homolog B, centractin b... 60 9e-10
gi|134133226 protein expressed in prostate, ovary, testis, and p... 59 2e-09
gi|239753333 PREDICTED: actin, beta-like 3 [Homo sapiens] 59 2e-09
gi|113413200 PREDICTED: similar to protein expressed in prostate... 59 2e-09
gi|239741769 PREDICTED: similar to protein expressed in prostate... 59 2e-09
gi|88953571 PREDICTED: similar to protein expressed in prostate,... 59 2e-09
gi|153791352 prostate, ovary, testis expressed protein on chromo... 59 2e-09
gi|239747898 PREDICTED: actin, beta-like 3 [Homo sapiens] 58 3e-09
gi|239741786 PREDICTED: kappa-actin [Homo sapiens] 58 3e-09
gi|4501885 beta actin [Homo sapiens] 58 3e-09
gi|4501887 actin, gamma 1 propeptide [Homo sapiens] 58 3e-09
gi|4501881 actin, alpha 1, skeletal muscle [Homo sapiens] 58 5e-09
gi|4501883 alpha 2 actin [Homo sapiens] 57 8e-09
gi|213688375 alpha 2 actin [Homo sapiens] 57 8e-09
gi|4885049 cardiac muscle alpha actin 1 proprotein [Homo sapiens] 57 8e-09
gi|63055057 actin, beta-like 2 [Homo sapiens] 57 1e-08
gi|4501889 actin, gamma 2 propeptide [Homo sapiens] 56 1e-08
gi|221139714 actin related protein M1 [Homo sapiens] 52 2e-07
gi|194097462 actin-like 9 [Homo sapiens] 49 2e-06
gi|30089999 actin-like 6A isoform 2 [Homo sapiens] 47 1e-05
gi|30089997 actin-like 6A isoform 2 [Homo sapiens] 47 1e-05
gi|4757718 actin-like 6A isoform 1 [Homo sapiens] 47 1e-05
gi|7705294 actin-like 6B [Homo sapiens] 46 1e-05
gi|67003576 hypothetical protein LOC170487 [Homo sapiens] 46 2e-05
>gi|239749318 PREDICTED: hypothetical protein XP_002346994 [Homo
sapiens]
Length = 171
Score = 354 bits (908), Expect = 2e-98
Identities = 171/171 (100%), Positives = 171/171 (100%)
Query: 1 MAERLQTDFVVTCERPGDVFTDEGVGAHGSPLSPETSAVGGGVRGKSCSRESAPWVVQDG 60
MAERLQTDFVVTCERPGDVFTDEGVGAHGSPLSPETSAVGGGVRGKSCSRESAPWVVQDG
Sbjct: 1 MAERLQTDFVVTCERPGDVFTDEGVGAHGSPLSPETSAVGGGVRGKSCSRESAPWVVQDG 60
Query: 61 LGPGGSGAAENVVLSGGSTMFRDFGRRLQRDLKRVVDARLRLSEELSGGRIKPKPVEVQV 120
LGPGGSGAAENVVLSGGSTMFRDFGRRLQRDLKRVVDARLRLSEELSGGRIKPKPVEVQV
Sbjct: 61 LGPGGSGAAENVVLSGGSTMFRDFGRRLQRDLKRVVDARLRLSEELSGGRIKPKPVEVQV 120
Query: 121 VTHHMQRYAVWFGGSMLASTPEFFQVCHTKKDYEEYGPSICRHNPVFGVMS 171
VTHHMQRYAVWFGGSMLASTPEFFQVCHTKKDYEEYGPSICRHNPVFGVMS
Sbjct: 121 VTHHMQRYAVWFGGSMLASTPEFFQVCHTKKDYEEYGPSICRHNPVFGVMS 171
>gi|9966913 actin-related protein 3-beta isoform 1 [Homo sapiens]
Length = 418
Score = 211 bits (537), Expect = 2e-55
Identities = 101/102 (99%), Positives = 102/102 (100%)
Query: 70 ENVVLSGGSTMFRDFGRRLQRDLKRVVDARLRLSEELSGGRIKPKPVEVQVVTHHMQRYA 129
+NVVLSGGSTMFRDFGRRLQRDLKRVVDARLRLSEELSGGRIKPKPVEVQVVTHHMQRYA
Sbjct: 317 KNVVLSGGSTMFRDFGRRLQRDLKRVVDARLRLSEELSGGRIKPKPVEVQVVTHHMQRYA 376
Query: 130 VWFGGSMLASTPEFFQVCHTKKDYEEYGPSICRHNPVFGVMS 171
VWFGGSMLASTPEFFQVCHTKKDYEEYGPSICRHNPVFGVMS
Sbjct: 377 VWFGGSMLASTPEFFQVCHTKKDYEEYGPSICRHNPVFGVMS 418
>gi|5031573 ARP3 actin-related protein 3 homolog [Homo sapiens]
Length = 418
Score = 201 bits (511), Expect = 3e-52
Identities = 92/102 (90%), Positives = 100/102 (98%)
Query: 70 ENVVLSGGSTMFRDFGRRLQRDLKRVVDARLRLSEELSGGRIKPKPVEVQVVTHHMQRYA 129
+N+VLSGGSTMFRDFGRRLQRDLKR VDARL+LSEELSGGR+KPKP++VQV+THHMQRYA
Sbjct: 317 KNIVLSGGSTMFRDFGRRLQRDLKRTVDARLKLSEELSGGRLKPKPIDVQVITHHMQRYA 376
Query: 130 VWFGGSMLASTPEFFQVCHTKKDYEEYGPSICRHNPVFGVMS 171
VWFGGSMLASTPEF+QVCHTKKDYEE GPSICRHNPVFGVMS
Sbjct: 377 VWFGGSMLASTPEFYQVCHTKKDYEEIGPSICRHNPVFGVMS 418
>gi|92373393 actin-related protein 3-beta isoform 2 [Homo sapiens]
Length = 348
Score = 73.9 bits (180), Expect = 6e-14
Identities = 31/31 (100%), Positives = 31/31 (100%)
Query: 141 PEFFQVCHTKKDYEEYGPSICRHNPVFGVMS 171
PEFFQVCHTKKDYEEYGPSICRHNPVFGVMS
Sbjct: 318 PEFFQVCHTKKDYEEYGPSICRHNPVFGVMS 348
>gi|169160859 PREDICTED: similar to actin, gamma 1 [Homo sapiens]
Length = 152
Score = 60.5 bits (145), Expect = 7e-10
Identities = 28/93 (30%), Positives = 50/93 (53%), Gaps = 16/93 (17%)
Query: 71 NVVLSGGSTMFRDFGRRLQRDLKRVVDARLRLSEELSGGRIKPKPVEVQVVTHHMQRYAV 130
N VLS G+TM+ D R+Q+ + + P ++++++ ++Y+V
Sbjct: 73 NTVLSSGTTMYPDITNRMQKAITALA----------------PSTMKIKIIAPRERKYSV 116
Query: 131 WFGGSMLASTPEFFQVCHTKKDYEEYGPSICRH 163
W GGS+L S F Q+C +K++Y++ GPS H
Sbjct: 117 WIGGSILTSLSTFQQMCTSKQEYDKLGPSTVHH 149
>gi|5031569 ARP1 actin-related protein 1 homolog A, centractin alpha
[Homo sapiens]
Length = 376
Score = 60.5 bits (145), Expect = 7e-10
Identities = 32/87 (36%), Positives = 50/87 (57%), Gaps = 16/87 (18%)
Query: 71 NVVLSGGSTMFRDFGRRLQRDLKRVVDARLRLSEELSGGRIKPKPVEVQVVTHHMQRYAV 130
N+VLSGGST+F+ FG RL ++K++ PK V++++ + Y+
Sbjct: 297 NIVLSGGSTLFKGFGDRLLSEVKKLA----------------PKDVKIRISAPQERLYST 340
Query: 131 WFGGSMLASTPEFFQVCHTKKDYEEYG 157
W GGS+LAS F ++ +KK+YEE G
Sbjct: 341 WIGGSILASLDTFKKMWVSKKEYEEDG 367
>gi|11342680 ARP1 actin-related protein 1 homolog B, centractin beta
[Homo sapiens]
Length = 376
Score = 60.1 bits (144), Expect = 9e-10
Identities = 31/87 (35%), Positives = 50/87 (57%), Gaps = 16/87 (18%)
Query: 71 NVVLSGGSTMFRDFGRRLQRDLKRVVDARLRLSEELSGGRIKPKPVEVQVVTHHMQRYAV 130
N+VLSGGST+F+ FG RL ++K++ PK +++++ + Y+
Sbjct: 297 NIVLSGGSTLFKGFGDRLLSEVKKLA----------------PKDIKIKISAPQERLYST 340
Query: 131 WFGGSMLASTPEFFQVCHTKKDYEEYG 157
W GGS+LAS F ++ +KK+YEE G
Sbjct: 341 WIGGSILASLDTFKKMWVSKKEYEEDG 367
>gi|134133226 protein expressed in prostate, ovary, testis, and
placenta 2 [Homo sapiens]
Length = 1075
Score = 58.9 bits (141), Expect = 2e-09
Identities = 29/90 (32%), Positives = 51/90 (56%), Gaps = 16/90 (17%)
Query: 71 NVVLSGGSTMFRDFGRRLQRDLKRVVDARLRLSEELSGGRIKPKPVEVQVVTHHMQRYAV 130
N VLSGG+TM+ R+Q+++ + P ++++++ ++Y+V
Sbjct: 996 NTVLSGGTTMYPGMAHRMQKEI----------------AALAPSMMKIRIIAPPKRKYSV 1039
Query: 131 WFGGSMLASTPEFFQVCHTKKDYEEYGPSI 160
W GGS+LAS F Q+ +K++Y+E GPSI
Sbjct: 1040 WVGGSILASLSTFQQMWISKQEYDESGPSI 1069
>gi|239753333 PREDICTED: actin, beta-like 3 [Homo sapiens]
Length = 924
Score = 58.9 bits (141), Expect = 2e-09
Identities = 29/90 (32%), Positives = 51/90 (56%), Gaps = 16/90 (17%)
Query: 71 NVVLSGGSTMFRDFGRRLQRDLKRVVDARLRLSEELSGGRIKPKPVEVQVVTHHMQRYAV 130
N VLSGG+TM+ R+Q+++ + P ++++++ ++Y+V
Sbjct: 845 NTVLSGGTTMYPGIAHRMQKEITALA----------------PSTMKIKIIAPPKRKYSV 888
Query: 131 WFGGSMLASTPEFFQVCHTKKDYEEYGPSI 160
W GGS+LAS F Q+ +K++Y+E GPSI
Sbjct: 889 WVGGSILASLSTFQQMWISKQEYDESGPSI 918
>gi|113413200 PREDICTED: similar to protein expressed in prostate,
ovary, testis, and placenta 2 [Homo sapiens]
Length = 1038
Score = 58.9 bits (141), Expect = 2e-09
Identities = 29/90 (32%), Positives = 51/90 (56%), Gaps = 16/90 (17%)
Query: 71 NVVLSGGSTMFRDFGRRLQRDLKRVVDARLRLSEELSGGRIKPKPVEVQVVTHHMQRYAV 130
N VLSGG+TM+ R+Q+++ + P ++++++ ++Y+V
Sbjct: 959 NTVLSGGTTMYPGMAHRMQKEI----------------AALAPSMMKIRIIAPPKRKYSV 1002
Query: 131 WFGGSMLASTPEFFQVCHTKKDYEEYGPSI 160
W GGS+LAS F Q+ +K++Y+E GPSI
Sbjct: 1003 WVGGSILASLSTFQQMWISKQEYDESGPSI 1032
>gi|239741769 PREDICTED: similar to protein expressed in prostate,
ovary, testis, and placenta 2 [Homo sapiens]
Length = 952
Score = 58.9 bits (141), Expect = 2e-09
Identities = 29/90 (32%), Positives = 51/90 (56%), Gaps = 16/90 (17%)
Query: 71 NVVLSGGSTMFRDFGRRLQRDLKRVVDARLRLSEELSGGRIKPKPVEVQVVTHHMQRYAV 130
N VLSGG+TM+ R+Q+++ + P ++++++ ++Y+V
Sbjct: 873 NTVLSGGTTMYPGMAHRMQKEI----------------AALAPSMLKIRIIAPPKRKYSV 916
Query: 131 WFGGSMLASTPEFFQVCHTKKDYEEYGPSI 160
W GGS+LAS F Q+ +K++Y+E GPSI
Sbjct: 917 WVGGSILASLSTFQQMWISKQEYDESGPSI 946
>gi|88953571 PREDICTED: similar to protein expressed in prostate,
ovary, testis, and placenta 2 isoform 2 [Homo sapiens]
Length = 1075
Score = 58.9 bits (141), Expect = 2e-09
Identities = 29/90 (32%), Positives = 51/90 (56%), Gaps = 16/90 (17%)
Query: 71 NVVLSGGSTMFRDFGRRLQRDLKRVVDARLRLSEELSGGRIKPKPVEVQVVTHHMQRYAV 130
N VLSGG+TM+ R+Q+++ + P ++++++ ++Y+V
Sbjct: 996 NTVLSGGTTMYPGMAHRMQKEI----------------AALAPSMLKIRIIAPPKRKYSV 1039
Query: 131 WFGGSMLASTPEFFQVCHTKKDYEEYGPSI 160
W GGS+LAS F Q+ +K++Y+E GPSI
Sbjct: 1040 WVGGSILASLSTFQQMWISKQEYDESGPSI 1069
>gi|153791352 prostate, ovary, testis expressed protein on chromosome
2 [Homo sapiens]
Length = 1075
Score = 58.9 bits (141), Expect = 2e-09
Identities = 29/90 (32%), Positives = 51/90 (56%), Gaps = 16/90 (17%)
Query: 71 NVVLSGGSTMFRDFGRRLQRDLKRVVDARLRLSEELSGGRIKPKPVEVQVVTHHMQRYAV 130
N VLSGG+TM+ R+Q+++ + P ++++++ ++Y+V
Sbjct: 996 NTVLSGGTTMYPGMAHRMQKEI----------------AALAPSMMKIRIIAPPKRKYSV 1039
Query: 131 WFGGSMLASTPEFFQVCHTKKDYEEYGPSI 160
W GGS+LAS F Q+ +K++Y+E GPSI
Sbjct: 1040 WVGGSILASLSTFQQMWISKQEYDESGPSI 1069
>gi|239747898 PREDICTED: actin, beta-like 3 [Homo sapiens]
Length = 924
Score = 58.2 bits (139), Expect = 3e-09
Identities = 29/90 (32%), Positives = 51/90 (56%), Gaps = 16/90 (17%)
Query: 71 NVVLSGGSTMFRDFGRRLQRDLKRVVDARLRLSEELSGGRIKPKPVEVQVVTHHMQRYAV 130
N VLSGG+TM+ R+Q+++ + P ++++++ ++Y+V
Sbjct: 845 NTVLSGGTTMYPGIAHRMQKEITALA----------------PSIMKIKIIAPPKRKYSV 888
Query: 131 WFGGSMLASTPEFFQVCHTKKDYEEYGPSI 160
W GGS+LAS F Q+ +K++Y+E GPSI
Sbjct: 889 WVGGSILASLSTFQQMWISKQEYDESGPSI 918
>gi|239741786 PREDICTED: kappa-actin [Homo sapiens]
Length = 924
Score = 58.2 bits (139), Expect = 3e-09
Identities = 29/90 (32%), Positives = 51/90 (56%), Gaps = 16/90 (17%)
Query: 71 NVVLSGGSTMFRDFGRRLQRDLKRVVDARLRLSEELSGGRIKPKPVEVQVVTHHMQRYAV 130
N VLSGG+TM+ R+Q+++ + P ++++++ ++Y+V
Sbjct: 845 NTVLSGGTTMYPGIAHRMQKEITALA----------------PSIMKIKIIAPPKRKYSV 888
Query: 131 WFGGSMLASTPEFFQVCHTKKDYEEYGPSI 160
W GGS+LAS F Q+ +K++Y+E GPSI
Sbjct: 889 WVGGSILASLSTFQQMWISKQEYDESGPSI 918
>gi|4501885 beta actin [Homo sapiens]
Length = 375
Score = 58.2 bits (139), Expect = 3e-09
Identities = 29/90 (32%), Positives = 51/90 (56%), Gaps = 16/90 (17%)
Query: 71 NVVLSGGSTMFRDFGRRLQRDLKRVVDARLRLSEELSGGRIKPKPVEVQVVTHHMQRYAV 130
N VLSGG+TM+ R+Q+++ + P ++++++ ++Y+V
Sbjct: 296 NTVLSGGTTMYPGIADRMQKEITALA----------------PSTMKIKIIAPPERKYSV 339
Query: 131 WFGGSMLASTPEFFQVCHTKKDYEEYGPSI 160
W GGS+LAS F Q+ +K++Y+E GPSI
Sbjct: 340 WIGGSILASLSTFQQMWISKQEYDESGPSI 369
>gi|4501887 actin, gamma 1 propeptide [Homo sapiens]
Length = 375
Score = 58.2 bits (139), Expect = 3e-09
Identities = 29/90 (32%), Positives = 51/90 (56%), Gaps = 16/90 (17%)
Query: 71 NVVLSGGSTMFRDFGRRLQRDLKRVVDARLRLSEELSGGRIKPKPVEVQVVTHHMQRYAV 130
N VLSGG+TM+ R+Q+++ + P ++++++ ++Y+V
Sbjct: 296 NTVLSGGTTMYPGIADRMQKEITALA----------------PSTMKIKIIAPPERKYSV 339
Query: 131 WFGGSMLASTPEFFQVCHTKKDYEEYGPSI 160
W GGS+LAS F Q+ +K++Y+E GPSI
Sbjct: 340 WIGGSILASLSTFQQMWISKQEYDESGPSI 369
>gi|4501881 actin, alpha 1, skeletal muscle [Homo sapiens]
Length = 377
Score = 57.8 bits (138), Expect = 5e-09
Identities = 29/90 (32%), Positives = 51/90 (56%), Gaps = 16/90 (17%)
Query: 71 NVVLSGGSTMFRDFGRRLQRDLKRVVDARLRLSEELSGGRIKPKPVEVQVVTHHMQRYAV 130
N V+SGG+TM+ R+Q+++ + P ++++++ ++Y+V
Sbjct: 298 NNVMSGGTTMYPGIADRMQKEITALA----------------PSTMKIKIIAPPERKYSV 341
Query: 131 WFGGSMLASTPEFFQVCHTKKDYEEYGPSI 160
W GGS+LAS F Q+ TK++Y+E GPSI
Sbjct: 342 WIGGSILASLSTFQQMWITKQEYDEAGPSI 371
>gi|4501883 alpha 2 actin [Homo sapiens]
Length = 377
Score = 57.0 bits (136), Expect = 8e-09
Identities = 29/90 (32%), Positives = 51/90 (56%), Gaps = 16/90 (17%)
Query: 71 NVVLSGGSTMFRDFGRRLQRDLKRVVDARLRLSEELSGGRIKPKPVEVQVVTHHMQRYAV 130
N VLSGG+TM+ R+Q+++ + P ++++++ ++Y+V
Sbjct: 298 NNVLSGGTTMYPGIADRMQKEITALA----------------PSTMKIKIIAPPERKYSV 341
Query: 131 WFGGSMLASTPEFFQVCHTKKDYEEYGPSI 160
W GGS+LAS F Q+ +K++Y+E GPSI
Sbjct: 342 WIGGSILASLSTFQQMWISKQEYDEAGPSI 371
>gi|213688375 alpha 2 actin [Homo sapiens]
Length = 377
Score = 57.0 bits (136), Expect = 8e-09
Identities = 29/90 (32%), Positives = 51/90 (56%), Gaps = 16/90 (17%)
Query: 71 NVVLSGGSTMFRDFGRRLQRDLKRVVDARLRLSEELSGGRIKPKPVEVQVVTHHMQRYAV 130
N VLSGG+TM+ R+Q+++ + P ++++++ ++Y+V
Sbjct: 298 NNVLSGGTTMYPGIADRMQKEITALA----------------PSTMKIKIIAPPERKYSV 341
Query: 131 WFGGSMLASTPEFFQVCHTKKDYEEYGPSI 160
W GGS+LAS F Q+ +K++Y+E GPSI
Sbjct: 342 WIGGSILASLSTFQQMWISKQEYDEAGPSI 371
>gi|4885049 cardiac muscle alpha actin 1 proprotein [Homo sapiens]
Length = 377
Score = 57.0 bits (136), Expect = 8e-09
Identities = 29/90 (32%), Positives = 51/90 (56%), Gaps = 16/90 (17%)
Query: 71 NVVLSGGSTMFRDFGRRLQRDLKRVVDARLRLSEELSGGRIKPKPVEVQVVTHHMQRYAV 130
N VLSGG+TM+ R+Q+++ + P ++++++ ++Y+V
Sbjct: 298 NNVLSGGTTMYPGIADRMQKEITALA----------------PSTMKIKIIAPPERKYSV 341
Query: 131 WFGGSMLASTPEFFQVCHTKKDYEEYGPSI 160
W GGS+LAS F Q+ +K++Y+E GPSI
Sbjct: 342 WIGGSILASLSTFQQMWISKQEYDEAGPSI 371
>gi|63055057 actin, beta-like 2 [Homo sapiens]
Length = 376
Score = 56.6 bits (135), Expect = 1e-08
Identities = 29/90 (32%), Positives = 50/90 (55%), Gaps = 16/90 (17%)
Query: 71 NVVLSGGSTMFRDFGRRLQRDLKRVVDARLRLSEELSGGRIKPKPVEVQVVTHHMQRYAV 130
N VLSGGSTM+ R+Q+++ + P ++++++ ++Y+V
Sbjct: 297 NTVLSGGSTMYPGIADRMQKEIITLA----------------PSTMKIKIIAPPERKYSV 340
Query: 131 WFGGSMLASTPEFFQVCHTKKDYEEYGPSI 160
W GGS+LAS F Q+ +K++Y+E GP I
Sbjct: 341 WIGGSILASLSTFQQMWISKQEYDEAGPPI 370
>gi|4501889 actin, gamma 2 propeptide [Homo sapiens]
Length = 376
Score = 56.2 bits (134), Expect = 1e-08
Identities = 29/90 (32%), Positives = 50/90 (55%), Gaps = 16/90 (17%)
Query: 71 NVVLSGGSTMFRDFGRRLQRDLKRVVDARLRLSEELSGGRIKPKPVEVQVVTHHMQRYAV 130
N VLSGG+TM+ R+Q+++ + P ++++++ ++Y+V
Sbjct: 297 NNVLSGGTTMYPGIADRMQKEITALA----------------PSTMKIKIIAPPERKYSV 340
Query: 131 WFGGSMLASTPEFFQVCHTKKDYEEYGPSI 160
W GGS+LAS F Q+ +K +Y+E GPSI
Sbjct: 341 WIGGSILASLSTFQQMWISKPEYDEAGPSI 370
>gi|221139714 actin related protein M1 [Homo sapiens]
Length = 372
Score = 52.0 bits (123), Expect = 2e-07
Identities = 29/90 (32%), Positives = 46/90 (51%), Gaps = 16/90 (17%)
Query: 71 NVVLSGGSTMFRDFGRRLQRDLKRVVDARLRLSEELSGGRIKPKPVEVQVVTHHMQRYAV 130
N++L+GGST F +RL +D+ +V P VQV+ ++ +V
Sbjct: 293 NIILAGGSTSFPGLDKRLVKDIAKVA----------------PANTAVQVIAPPERKISV 336
Query: 131 WFGGSMLASTPEFFQVCHTKKDYEEYGPSI 160
W GGS+LAS F + T +++E GP+I
Sbjct: 337 WMGGSILASLSAFQDMWITAAEFKEVGPNI 366
>gi|194097462 actin-like 9 [Homo sapiens]
Length = 416
Score = 49.3 bits (116), Expect = 2e-06
Identities = 30/92 (32%), Positives = 43/92 (46%), Gaps = 16/92 (17%)
Query: 69 AENVVLSGGSTMFRDFGRRLQRDLKRVVDARLRLSEELSGGRIKPKPVEVQVVTHHMQRY 128
A+NV+L GGS++F F R + +L R + P V V + +
Sbjct: 335 AQNVLLCGGSSLFTGFEGRFRAELLRAL----------------PAETHVVVAAQPTRNF 378
Query: 129 AVWFGGSMLASTPEFFQVCHTKKDYEEYGPSI 160
+VW GGS+LAS F ++ YEE GP I
Sbjct: 379 SVWIGGSILASLRAFQSCWVLREQYEEQGPYI 410
>gi|30089999 actin-like 6A isoform 2 [Homo sapiens]
Length = 387
Score = 46.6 bits (109), Expect = 1e-05
Identities = 27/91 (29%), Positives = 48/91 (52%), Gaps = 13/91 (14%)
Query: 67 GAAENVVLSGGSTMFRDFGRRLQRDLKRVVDARLRLSEELSGGRIKPKPVEVQVVTHHMQ 126
G +V+++GG+T+ + F RL R+L + +RL + ++ +
Sbjct: 301 GLYGSVIVAGGNTLIQSFTDRLNRELSQKTPPSMRLKLIANNTTVE-------------R 347
Query: 127 RYAVWFGGSMLASTPEFFQVCHTKKDYEEYG 157
R++ W GGS+LAS F Q+ +K++YEE G
Sbjct: 348 RFSSWIGGSILASLGTFQQMWISKQEYEEGG 378
>gi|30089997 actin-like 6A isoform 2 [Homo sapiens]
Length = 387
Score = 46.6 bits (109), Expect = 1e-05
Identities = 27/91 (29%), Positives = 48/91 (52%), Gaps = 13/91 (14%)
Query: 67 GAAENVVLSGGSTMFRDFGRRLQRDLKRVVDARLRLSEELSGGRIKPKPVEVQVVTHHMQ 126
G +V+++GG+T+ + F RL R+L + +RL + ++ +
Sbjct: 301 GLYGSVIVAGGNTLIQSFTDRLNRELSQKTPPSMRLKLIANNTTVE-------------R 347
Query: 127 RYAVWFGGSMLASTPEFFQVCHTKKDYEEYG 157
R++ W GGS+LAS F Q+ +K++YEE G
Sbjct: 348 RFSSWIGGSILASLGTFQQMWISKQEYEEGG 378
>gi|4757718 actin-like 6A isoform 1 [Homo sapiens]
Length = 429
Score = 46.6 bits (109), Expect = 1e-05
Identities = 27/91 (29%), Positives = 48/91 (52%), Gaps = 13/91 (14%)
Query: 67 GAAENVVLSGGSTMFRDFGRRLQRDLKRVVDARLRLSEELSGGRIKPKPVEVQVVTHHMQ 126
G +V+++GG+T+ + F RL R+L + +RL + ++ +
Sbjct: 343 GLYGSVIVAGGNTLIQSFTDRLNRELSQKTPPSMRLKLIANNTTVE-------------R 389
Query: 127 RYAVWFGGSMLASTPEFFQVCHTKKDYEEYG 157
R++ W GGS+LAS F Q+ +K++YEE G
Sbjct: 390 RFSSWIGGSILASLGTFQQMWISKQEYEEGG 420
>gi|7705294 actin-like 6B [Homo sapiens]
Length = 426
Score = 46.2 bits (108), Expect = 1e-05
Identities = 28/91 (30%), Positives = 47/91 (51%), Gaps = 13/91 (14%)
Query: 67 GAAENVVLSGGSTMFRDFGRRLQRDLKRVVDARLRLSEELSGGRIKPKPVEVQVVTHHMQ 126
G +V+++GG+T+ + F RL R+L + +RL S ++ K
Sbjct: 340 GLYGSVIVTGGNTLLQGFTDRLNRELSQKTPPSMRLKLIASNSTMERK------------ 387
Query: 127 RYAVWFGGSMLASTPEFFQVCHTKKDYEEYG 157
++ W GGS+LAS F Q+ +K++YEE G
Sbjct: 388 -FSPWIGGSILASLGTFQQMWISKQEYEEGG 417
>gi|67003576 hypothetical protein LOC170487 [Homo sapiens]
Length = 245
Score = 45.8 bits (107), Expect = 2e-05
Identities = 32/89 (35%), Positives = 46/89 (51%), Gaps = 12/89 (13%)
Query: 69 AENVVLSGGSTMFRDFGRRLQRDLKRVVDARLRLSEELSGGRIKPKPVEVQVVTHHMQRY 128
A+ VVL+GGST+F F RL ++L +A+ R R + +V H +
Sbjct: 160 ADTVVLAGGSTLFPGFAERLDKEL----EAQCR--------RHGYAALRPHLVAKHGRGM 207
Query: 129 AVWFGGSMLASTPEFFQVCHTKKDYEEYG 157
AVW GGSM+AS F + T+ Y+E G
Sbjct: 208 AVWTGGSMVASLHSFQRRWITRAMYQECG 236
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.136 0.420
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,615,885
Number of Sequences: 37866
Number of extensions: 360864
Number of successful extensions: 1085
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 1004
Number of HSP's gapped (non-prelim): 64
length of query: 171
length of database: 18,247,518
effective HSP length: 95
effective length of query: 76
effective length of database: 14,650,248
effective search space: 1113418848
effective search space used: 1113418848
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.