Guide to the Human Genome
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Name: ACTBL2 Sequence: fasta or formatted (376aa) NCBI GI: 63055057
Description:

actin, beta-like 2

Referenced in:

Actin and Related Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.2         27           3
 C cysteine            1.6          6           1
 D aspartate           5.9         22           2
 E glutamate           6.9         26           1
 F phenylalanine       3.5         13           1
 G glycine             7.7         29           2
 H histidine           2.1          8           1
 I isoleucine          8.0         30           2
 K lysine              4.8         18           1
 L leucine             6.9         26           2
 M methionine          4.5         17           1
 N asparagine          2.9         11           1
 P proline             5.6         21           2
 Q glutamine           3.2         12           2
 R arginine            5.3         20           1
 S serine              6.1         23           3
 T threonine           6.1         23           3
 V valine              6.4         24           2
 W tryptophan          1.1          4           1
 Y tyrosine            4.3         16           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   actin, beta-like 2 
ACTB                  0.930   beta actin 
ACTG1                 0.928   actin, gamma 1 propeptide 
ACTC1                 0.900   cardiac muscle alpha actin 1 proprotein 
ACTG2                 0.900   actin, gamma 2 propeptide 
ACTA2                 0.900   alpha 2 actin 
ACTA2                 0.900   alpha 2 actin 
ACTA1                 0.896   actin, alpha 1, skeletal muscle 
ACTBL3                0.862   PREDICTED: actin, beta-like 3 
ACTBL3                0.862   PREDICTED: kappa-actin 
POTEE                 0.860   protein expressed in prostate, ovary, testis, and p...
LOC653269             0.858   PREDICTED: similar to protein expressed in prostate...
LOC653269             0.858   PREDICTED: similar to protein expressed in prostate,...
ACTBL3                0.858   PREDICTED: actin, beta-like 3 
POTEF                 0.851   prostate, ovary, testis expressed protein on chromo...
LOC653781             0.850   PREDICTED: similar to protein expressed in prostate...
ACTR1B                0.542   ARP1 actin-related protein 1 homolog B, centractin b...
ACTR1A                0.531   ARP1 actin-related protein 1 homolog A, centractin al...
ARPM1                 0.481   actin related protein M1 
LOC100128069          0.461   PREDICTED: similar to alpha actin 
ACTRT1                0.458   actin-related protein T1 
ACTRT2                0.455   actin-related protein M2 
LOC100128069          0.444   PREDICTED: similar to Actin, alpha 1, skeletal musc...
ACTR2                 0.440   actin-related protein 2 isoform b 
ACTR2                 0.435   actin-related protein 2 isoform a 
ACTL7A                0.402   actin-like 7A 
ACTL7B                0.385   actin-like 7B 
ACTL9                 0.373   actin-like 9 
ACTR3B                0.302   actin-related protein 3-beta isoform 1 
ACTL6B                0.301   actin-like 6B 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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