Guide to the Human Genome
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Name: ACTG2 Sequence: fasta or formatted (376aa) NCBI GI: 4501889
Description:

actin, gamma 2 propeptide

Referenced in:

Actin and Related Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.7         29           2
 C cysteine            1.9          7           1
 D aspartate           5.3         20           2
 E glutamate           7.7         29           3
 F phenylalanine       3.2         12           1
 G glycine             7.4         28           2
 H histidine           2.4          9           2
 I isoleucine          8.0         30           2
 K lysine              5.1         19           1
 L leucine             7.2         27           2
 M methionine          4.3         16           1
 N asparagine          3.2         12           2
 P proline             5.3         20           2
 Q glutamine           2.7         10           2
 R arginine            4.8         18           1
 S serine              6.6         25           4
 T threonine           6.6         25           2
 V valine              5.3         20           1
 W tryptophan          1.1          4           1
 Y tyrosine            4.3         16           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   actin, gamma 2 propeptide 
ACTA2                 0.986   alpha 2 actin 
ACTA2                 0.986   alpha 2 actin 
ACTC1                 0.981   cardiac muscle alpha actin 1 proprotein 
ACTA1                 0.978   actin, alpha 1, skeletal muscle 
ACTG1                 0.946   actin, gamma 1 propeptide 
ACTB                  0.940   beta actin 
ACTBL2                0.899   actin, beta-like 2 
POTEE                 0.871   protein expressed in prostate, ovary, testis, and p...
ACTBL3                0.871   PREDICTED: actin, beta-like 3 
ACTBL3                0.871   PREDICTED: kappa-actin 
LOC653269             0.866   PREDICTED: similar to protein expressed in prostate...
LOC653269             0.866   PREDICTED: similar to protein expressed in prostate,...
ACTBL3                0.866   PREDICTED: actin, beta-like 3 
POTEF                 0.865   prostate, ovary, testis expressed protein on chromo...
LOC653781             0.859   PREDICTED: similar to protein expressed in prostate...
ACTR1B                0.547   ARP1 actin-related protein 1 homolog B, centractin b...
ACTR1A                0.537   ARP1 actin-related protein 1 homolog A, centractin al...
ARPM1                 0.490   actin related protein M1 
LOC100128069          0.479   PREDICTED: similar to alpha actin 
ACTRT1                0.465   actin-related protein T1 
LOC100128069          0.464   PREDICTED: similar to Actin, alpha 1, skeletal musc...
ACTRT2                0.461   actin-related protein M2 
ACTR2                 0.444   actin-related protein 2 isoform b 
ACTR2                 0.438   actin-related protein 2 isoform a 
ACTL7A                0.407   actin-like 7A 
ACTL7B                0.392   actin-like 7B 
ACTL9                 0.373   actin-like 9 
ACTL6B                0.303   actin-like 6B 
ACTR3B                0.302   actin-related protein 3-beta isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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