Guide to the Human Genome
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Name: ACTR3B Sequence: fasta or formatted (418aa) NCBI GI: 9966913
Description:

actin-related protein 3-beta isoform 1

Referenced in:

Actin and Related Proteins

Other entries for this name:
alt prot [348aa] actin-related protein 3-beta isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.7         24           2
 C cysteine            2.2          9           1
 D aspartate           6.0         25           2
 E glutamate           7.7         32           2
 F phenylalanine       5.3         22           2
 G glycine             6.9         29           2
 H histidine           2.2          9           2
 I isoleucine          8.1         34           2
 K lysine              5.0         21           2
 L leucine             6.0         25           2
 M methionine          2.4         10           1
 N asparagine          2.4         10           1
 P proline             6.5         27           2
 Q glutamine           3.8         16           2
 R arginine            6.5         27           2
 S serine              4.5         19           1
 T threonine           4.3         18           1
 V valine              9.1         38           2
 W tryptophan          1.2          5           1
 Y tyrosine            4.3         18           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   actin-related protein 3-beta isoform 1 
ACTR3                 0.928   ARP3 actin-related protein 3 homolog 
ACTR3B                0.752   actin-related protein 3-beta isoform 2 
ARP11                 0.426   PREDICTED: actin-related Arp11 
ARP11                 0.426   PREDICTED: actin-related Arp11 
ARP11                 0.424   PREDICTED: actin-related Arp11 
ACTB                  0.272   beta actin 
ACTG1                 0.272   actin, gamma 1 propeptide 
ACTA1                 0.271   actin, alpha 1, skeletal muscle 
ACTC1                 0.270   cardiac muscle alpha actin 1 proprotein 
ACTA2                 0.269   alpha 2 actin 
ACTA2                 0.269   alpha 2 actin 
ACTG2                 0.267   actin, gamma 2 propeptide 
ACTBL2                0.267   actin, beta-like 2 
ACTR1B                0.253   ARP1 actin-related protein 1 homolog B, centractin b...
ACTR1A                0.252   ARP1 actin-related protein 1 homolog A, centractin al...
POTEE                 0.245   protein expressed in prostate, ovary, testis, and p...
ACTBL3                0.245   PREDICTED: actin, beta-like 3 
ACTBL3                0.245   PREDICTED: kappa-actin 
LOC653269             0.243   PREDICTED: similar to protein expressed in prostate...
LOC653269             0.243   PREDICTED: similar to protein expressed in prostate,...
ACTBL3                0.241   PREDICTED: actin, beta-like 3 
LOC653781             0.241   PREDICTED: similar to protein expressed in prostate...
POTEF                 0.241   prostate, ovary, testis expressed protein on chromo...
LOC100290215          0.223   PREDICTED: hypothetical protein XP_002346994 
ACTR2                 0.222   actin-related protein 2 isoform a 
ACTR2                 0.221   actin-related protein 2 isoform b 
ACTL9                 0.198   actin-like 9 
ARPM1                 0.189   actin related protein M1 
ACTRT2                0.188   actin-related protein M2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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