Guide to the Human Genome
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Name: ACTR3B Sequence: fasta or formatted (348aa) NCBI GI: 92373393
Description:

actin-related protein 3-beta isoform 2

Referenced in:

Actin and Related Proteins

Other entries for this name:
alt prot [418aa] actin-related protein 3-beta isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.0         21           2
 C cysteine            2.6          9           1
 D aspartate           6.3         22           2
 E glutamate           8.3         29           2
 F phenylalanine       5.5         19           2
 G glycine             6.3         22           1
 H histidine           2.0          7           1
 I isoleucine          9.5         33           2
 K lysine              5.2         18           2
 L leucine             5.2         18           2
 M methionine          2.0          7           1
 N asparagine          2.6          9           1
 P proline             7.2         25           2
 Q glutamine           3.7         13           2
 R arginine            5.2         18           2
 S serine              3.7         13           1
 T threonine           4.3         15           1
 V valine              8.3         29           2
 W tryptophan          1.1          4           1
 Y tyrosine            4.9         17           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   actin-related protein 3-beta isoform 2 
ACTR3B                0.900   actin-related protein 3-beta isoform 1 
ACTR3                 0.829   ARP3 actin-related protein 3 homolog 
ARP11                 0.511   PREDICTED: actin-related Arp11 
ARP11                 0.511   PREDICTED: actin-related Arp11 
ARP11                 0.509   PREDICTED: actin-related Arp11 
ACTB                  0.250   beta actin 
ACTG1                 0.250   actin, gamma 1 propeptide 
ACTA1                 0.248   actin, alpha 1, skeletal muscle 
ACTC1                 0.248   cardiac muscle alpha actin 1 proprotein 
ACTA2                 0.247   alpha 2 actin 
ACTA2                 0.247   alpha 2 actin 
ACTG2                 0.247   actin, gamma 2 propeptide 
ACTBL2                0.245   actin, beta-like 2 
ACTR1B                0.224   ARP1 actin-related protein 1 homolog B, centractin b...
ACTR1A                0.221   ARP1 actin-related protein 1 homolog A, centractin al...
ACTBL3                0.217   PREDICTED: actin, beta-like 3 
ACTBL3                0.217   PREDICTED: kappa-actin 
POTEE                 0.215   protein expressed in prostate, ovary, testis, and p...
LOC653269             0.214   PREDICTED: similar to protein expressed in prostate...
LOC653269             0.214   PREDICTED: similar to protein expressed in prostate,...
ACTR2                 0.214   actin-related protein 2 isoform a 
ACTR2                 0.212   actin-related protein 2 isoform b 
ACTBL3                0.211   PREDICTED: actin, beta-like 3 
LOC653781             0.211   PREDICTED: similar to protein expressed in prostate...
POTEF                 0.211   prostate, ovary, testis expressed protein on chromo...
ACTL9                 0.176   actin-like 9 
ACTRT2                0.174   actin-related protein M2 
ACTRT1                0.172   actin-related protein T1 
LOC100128069          0.168   PREDICTED: similar to Actin, alpha 1, skeletal musc...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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