LOC646821 7115

Name: LOC646821	Sequence: fasta or formatted (152aa)		NCBI GI: 169160859
Description: PREDICTED: similar to actin, gamma 1		Referenced in: Actin and Related Proteins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 4.6 7 1 C cysteine 3.9 6 1 D aspartate 5.3 8 2 E glutamate 3.9 6 1 F phenylalanine 4.6 7 1 G glycine 5.3 8 2 H histidine 2.0 3 2 I isoleucine 7.2 11 2 K lysine 9.2 14 2 L leucine 6.6 10 1 M methionine 4.6 7 1 N asparagine 2.6 4 1 P proline 3.9 6 1 Q glutamine 4.6 7 2 R arginine 3.9 6 1 S serine 8.6 13 2 T threonine 10.5 16 2 V valine 4.6 7 1 W tryptophan 0.7 1 1 Y tyrosine 3.3 5 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: similar to actin, gamma 1 ACTB 0.767 beta actin ACTG1 0.767 actin, gamma 1 propeptide ACTA2 0.742 alpha 2 actin ACTA2 0.742 alpha 2 actin ACTC1 0.742 cardiac muscle alpha actin 1 proprotein ACTA1 0.735 actin, alpha 1, skeletal muscle ACTG2 0.732 actin, gamma 2 propeptide ACTBL3 0.725 PREDICTED: actin, beta-like 3 ACTBL3 0.721 PREDICTED: actin, beta-like 3 ACTBL3 0.721 PREDICTED: kappa-actin POTEE 0.711 protein expressed in prostate, ovary, testis, and p... ACTBL2 0.704 actin, beta-like 2 POTEF 0.704 prostate, ovary, testis expressed protein on chromo... LOC653269 0.693 PREDICTED: similar to protein expressed in prostate... LOC653269 0.693 PREDICTED: similar to protein expressed in prostate,... LOC653781 0.690 PREDICTED: similar to protein expressed in prostate... LOC646048 0.411 PREDICTED: similar to actin alpha 1 skeletal muscle... LOC646048 0.411 PREDICTED: similar to actin alpha 1 skeletal muscle... ARPM1 0.390 actin related protein M1 ACTR1A 0.380 ARP1 actin-related protein 1 homolog A, centractin al... ACTR1B 0.376 ARP1 actin-related protein 1 homolog B, centractin b... ACTRT1 0.348 actin-related protein T1 ACTRT2 0.321 actin-related protein M2 ACTL7B 0.310 actin-like 7B LOC100128069 0.282 PREDICTED: similar to alpha actin ACTL7A 0.282 actin-like 7A ACTL6B 0.272 actin-like 6B ACTL6A 0.265 actin-like 6A isoform 2 ACTL6A 0.265 actin-like 6A isoform 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.