ACTL6A 30517

Name: ACTL6A	Sequence: fasta or formatted (429aa)		NCBI GI: 4757718
Description: actin-like 6A isoform 1		Referenced in: Actin and Related Proteins
Other entries for this name: alt prot [387aa] actin-like 6A isoform 2 alt prot [387aa] actin-like 6A isoform 2
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.3 27 2 C cysteine 2.1 9 1 D aspartate 5.4 23 2 E glutamate 6.5 28 2 F phenylalanine 3.7 16 2 G glycine 8.9 38 2 H histidine 2.1 9 1 I isoleucine 5.4 23 1 K lysine 4.9 21 1 L leucine 7.2 31 1 M methionine 4.0 17 1 N asparagine 4.2 18 2 P proline 5.1 22 2 Q glutamine 4.2 18 2 R arginine 4.4 19 2 S serine 7.0 30 2 T threonine 6.3 27 2 V valine 7.5 32 2 W tryptophan 1.4 6 1 Y tyrosine 3.5 15 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 actin-like 6A isoform 1 ACTL6A 0.898 actin-like 6A isoform 2 ACTL6A 0.898 actin-like 6A isoform 2 ACTL6B 0.852 actin-like 6B ACTA1 0.263 actin, alpha 1, skeletal muscle ACTC1 0.263 cardiac muscle alpha actin 1 proprotein ACTB 0.262 beta actin ACTG1 0.262 actin, gamma 1 propeptide ACTA2 0.256 alpha 2 actin ACTA2 0.256 alpha 2 actin ACTG2 0.256 actin, gamma 2 propeptide ACTBL2 0.254 actin, beta-like 2 ACTBL3 0.239 PREDICTED: actin, beta-like 3 ACTBL3 0.239 PREDICTED: kappa-actin ACTBL3 0.235 PREDICTED: actin, beta-like 3 LOC653781 0.233 PREDICTED: similar to protein expressed in prostate... LOC653269 0.233 PREDICTED: similar to protein expressed in prostate... LOC653269 0.233 PREDICTED: similar to protein expressed in prostate,... POTEF 0.232 prostate, ovary, testis expressed protein on chromo... POTEE 0.231 protein expressed in prostate, ovary, testis, and p... ACTR1B 0.215 ARP1 actin-related protein 1 homolog B, centractin b... ACTR1A 0.207 ARP1 actin-related protein 1 homolog A, centractin al... ACTRT2 0.183 actin-related protein M2 ACTL9 0.177 actin-like 9 ACTRT1 0.177 actin-related protein T1 ARPM1 0.173 actin related protein M1 ACTL7B 0.166 actin-like 7B ACTL7A 0.152 actin-like 7A ACTR3B 0.152 actin-related protein 3-beta isoform 1 LOC100128069 0.145 PREDICTED: similar to alpha actin Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.