Guide to the Human Genome
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Name: ACTBL3 Sequence: fasta or formatted (924aa) NCBI GI: 239753333
Description:

PREDICTED: actin, beta-like 3

Referenced in:

Actin and Related Proteins
Prostate

Other entries for this name:
alt prot [924aa] PREDICTED: kappa-actin
alt prot [924aa] PREDICTED: actin, beta-like 3
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.2         57           3
 C cysteine            2.6         24           2
 D aspartate           6.1         56           3
 E glutamate           8.3         77           3
 F phenylalanine       2.4         22           1
 G glycine             6.4         59           2
 H histidine           3.4         31           3
 I isoleucine          4.7         43           2
 K lysine              8.1         75           3
 L leucine             9.0         83           3
 M methionine          3.7         34           2
 N asparagine          4.3         40           1
 P proline             4.1         38           2
 Q glutamine           4.4         41           2
 R arginine            4.1         38           2
 S serine              7.4         68           4
 T threonine           5.5         51           3
 V valine              5.4         50           2
 W tryptophan          1.0          9           2
 X unknown             0.2          2           1
 Y tyrosine            2.8         26           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: actin, beta-like 3 
ACTBL3                0.994   PREDICTED: actin, beta-like 3 
ACTBL3                0.990   PREDICTED: kappa-actin 
LOC653269             0.908   PREDICTED: similar to protein expressed in prostate...
LOC653269             0.611   PREDICTED: similar to protein expressed in prostate,...
POTEE                 0.610   protein expressed in prostate, ovary, testis, and p...
LOC653781             0.606   PREDICTED: similar to protein expressed in prostate...
POTEF                 0.605   prostate, ovary, testis expressed protein on chromo...
LOC100287399          0.482   PREDICTED: hypothetical protein XP_002343353 
LOC100288966          0.482   PREDICTED: hypothetical protein XP_002343915 isofor...
POTEB                 0.477   protein expressed in prostate, ovary, testis, and pl...
POTED                 0.477   pote protein 
LOC100288966          0.475   PREDICTED: hypothetical protein XP_002343914 isofor...
POTEC                 0.453   ANKRD26-like family B, member 2 
POTEG                 0.448   POTE ankyrin domain family, member G 
P704P                 0.446   prostate-specific P704P 
POTEH                 0.445   ANKRD26-like family C, member 3 
ACTB                  0.365   beta actin 
ACTG1                 0.362   actin, gamma 1 propeptide 
ACTA2                 0.347   alpha 2 actin 
ACTA2                 0.347   alpha 2 actin 
ACTC1                 0.347   cardiac muscle alpha actin 1 proprotein 
ACTG2                 0.346   actin, gamma 2 propeptide 
ACTA1                 0.346   actin, alpha 1, skeletal muscle 
ACTBL2                0.342   actin, beta-like 2 
POTEA                 0.316   POTE ankyrin domain family, member A isoform 2 [Homo...
POTEA                 0.272   POTE ankyrin domain family, member A isoform 1 [Homo...
ACTR1B                0.208   ARP1 actin-related protein 1 homolog B, centractin b...
ACTR1A                0.206   ARP1 actin-related protein 1 homolog A, centractin al...
ARPM1                 0.186   actin related protein M1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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