Name: POTEE | Sequence: fasta or formatted (1075aa) | NCBI GI: 134133226 | |
Description: protein expressed in prostate, ovary, testis, and placenta 2
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Referenced in: Actin and Related Proteins
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Composition:
Amino acid Percentage Count Longest homopolymer A alanine 5.5 59 2 C cysteine 2.6 28 2 D aspartate 6.0 64 3 E glutamate 9.3 100 3 F phenylalanine 2.3 25 1 G glycine 6.6 71 2 H histidine 3.2 34 3 I isoleucine 4.6 49 2 K lysine 8.1 87 3 L leucine 8.9 96 3 M methionine 3.9 42 2 N asparagine 4.9 53 2 P proline 4.2 45 2 Q glutamine 4.4 47 2 R arginine 4.8 52 2 S serine 7.5 81 4 T threonine 4.9 53 2 V valine 4.7 50 2 W tryptophan 0.9 10 2 Y tyrosine 2.7 29 1 |
Comparative genomics:
Search single species RefSeq proteins at NCBI
Search summary
Figure data | ||
Related human proteins:Protein Relative score Description Self-match 1.000 protein expressed in prostate, ovary, testis, and p... POTEF 0.985 prostate, ovary, testis expressed protein on chromo... LOC653269 0.966 PREDICTED: similar to protein expressed in prostate,... LOC653781 0.922 PREDICTED: similar to protein expressed in prostate... LOC653269 0.544 PREDICTED: similar to protein expressed in prostate... ACTBL3 0.524 PREDICTED: kappa-actin ACTBL3 0.524 PREDICTED: actin, beta-like 3 ACTBL3 0.521 PREDICTED: actin, beta-like 3 POTEG 0.394 POTE ankyrin domain family, member G P704P 0.394 prostate-specific P704P POTEB 0.389 protein expressed in prostate, ovary, testis, and pl... POTEH 0.389 ANKRD26-like family C, member 3 POTEC 0.387 ANKRD26-like family B, member 2 POTED 0.382 pote protein LOC100288966 0.381 PREDICTED: hypothetical protein XP_002343914 isofor... LOC100287399 0.354 PREDICTED: hypothetical protein XP_002343353 LOC100288966 0.347 PREDICTED: hypothetical protein XP_002343915 isofor... ACTB 0.313 beta actin ACTG1 0.311 actin, gamma 1 propeptide ACTA2 0.299 alpha 2 actin ACTA2 0.299 alpha 2 actin ACTC1 0.298 cardiac muscle alpha actin 1 proprotein ACTG2 0.297 actin, gamma 2 propeptide ACTA1 0.297 actin, alpha 1, skeletal muscle ACTBL2 0.293 actin, beta-like 2 POTEA 0.275 POTE ankyrin domain family, member A isoform 2 [Homo... POTEA 0.233 POTE ankyrin domain family, member A isoform 1 [Homo... ACTR1B 0.176 ARP1 actin-related protein 1 homolog B, centractin b... ACTR1A 0.175 ARP1 actin-related protein 1 homolog A, centractin al... ARPM1 0.161 actin related protein M1Human BLASTP results (used to prepare the table) |
Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.
See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.