ACTR1B 1288

Name: ACTR1B	Sequence: fasta or formatted (376aa)		NCBI GI: 11342680
Description: ARP1 actin-related protein 1 homolog B, centractin beta		Referenced in: Actin and Related Proteins Dynein and Dynactin
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.2 27 2 C cysteine 0.5 2 1 D aspartate 6.1 23 1 E glutamate 7.7 29 2 F phenylalanine 5.1 19 2 G glycine 7.4 28 2 H histidine 2.7 10 1 I isoleucine 5.9 22 2 K lysine 6.1 23 2 L leucine 9.0 34 3 M methionine 2.7 10 1 N asparagine 2.4 9 1 P proline 5.1 19 1 Q glutamine 2.7 10 1 R arginine 6.1 23 2 S serine 6.4 24 1 T threonine 4.8 18 2 V valine 7.7 29 2 W tryptophan 1.1 4 1 Y tyrosine 3.5 13 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 ARP1 actin-related protein 1 homolog B, centractin b... ACTR1A 0.937 ARP1 actin-related protein 1 homolog A, centractin al... ACTC1 0.558 cardiac muscle alpha actin 1 proprotein ACTG1 0.558 actin, gamma 1 propeptide ACTB 0.556 beta actin ACTA1 0.555 actin, alpha 1, skeletal muscle ACTA2 0.553 alpha 2 actin ACTA2 0.553 alpha 2 actin ACTG2 0.553 actin, gamma 2 propeptide ACTBL2 0.548 actin, beta-like 2 ACTBL3 0.533 PREDICTED: actin, beta-like 3 ACTBL3 0.533 PREDICTED: kappa-actin ACTBL3 0.527 PREDICTED: actin, beta-like 3 POTEE 0.523 protein expressed in prostate, ovary, testis, and p... LOC653269 0.523 PREDICTED: similar to protein expressed in prostate... LOC653269 0.523 PREDICTED: similar to protein expressed in prostate,... POTEF 0.521 prostate, ovary, testis expressed protein on chromo... LOC653781 0.515 PREDICTED: similar to protein expressed in prostate... ACTR2 0.408 actin-related protein 2 isoform b ACTR2 0.405 actin-related protein 2 isoform a ARPM1 0.395 actin related protein M1 ACTRT2 0.395 actin-related protein M2 ACTRT1 0.377 actin-related protein T1 ACTL7B 0.340 actin-like 7B ACTL7A 0.333 actin-like 7A LOC100128069 0.326 PREDICTED: similar to alpha actin LOC100128069 0.321 PREDICTED: similar to Actin, alpha 1, skeletal musc... ACTL9 0.310 actin-like 9 ACTR3B 0.289 actin-related protein 3-beta isoform 1 ACTR3 0.289 ARP3 actin-related protein 3 homolog Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.