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Search of human proteins with 239748752
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239748752 PREDICTED: hypothetical protein XP_002346787 [Homo
sapiens]
(278 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239748752 PREDICTED: hypothetical protein XP_002346787 [Homo ... 577 e-165
gi|19924099 synapsin I isoform Ia [Homo sapiens] 54 1e-07
gi|19924097 synapsin I isoform Ib [Homo sapiens] 54 1e-07
gi|13376335 hypothetical protein LOC79946 [Homo sapiens] 54 1e-07
gi|190014636 hypothetical protein LOC286262 isoform 2 [Homo sapi... 54 2e-07
gi|190014638 hypothetical protein LOC286262 isoform 1 [Homo sapi... 54 2e-07
gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens] 53 3e-07
gi|239754042 PREDICTED: similar to hCG1646049 [Homo sapiens] 52 4e-07
gi|239748572 PREDICTED: similar to hCG1646049 [Homo sapiens] 52 4e-07
gi|169167670 PREDICTED: similar to hCG1646049 [Homo sapiens] 52 4e-07
gi|110832843 TBP-associated factor 4 [Homo sapiens] 52 4e-07
gi|171543895 ataxin 2 [Homo sapiens] 51 1e-06
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] 51 1e-06
gi|237757310 synaptojanin 1 isoform a [Homo sapiens] 50 2e-06
gi|237757308 synaptojanin 1 isoform b [Homo sapiens] 50 2e-06
gi|37537692 proline-rich protein BstNI subfamily 4 precursor [Ho... 50 2e-06
gi|117306167 proline-rich protein BstNI subfamily 3 precursor [H... 50 2e-06
gi|237757312 synaptojanin 1 isoform c [Homo sapiens] 50 3e-06
gi|239754657 PREDICTED: hypothetical protein XP_002346062 [Homo ... 50 3e-06
gi|239743279 PREDICTED: hypothetical protein XP_002342816 [Homo ... 50 3e-06
gi|239508962 PREDICTED: hypothetical protein [Homo sapiens] 50 3e-06
gi|171906567 peripheral benzodiazepine receptor-associated prote... 50 3e-06
gi|171906559 peripheral benzodiazepine receptor-associated prote... 50 3e-06
gi|170650694 centaurin, gamma 1 isoform PIKE-L [Homo sapiens] 49 4e-06
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi... 49 4e-06
gi|163914392 glioma tumor suppressor candidate region gene 1 [Ho... 49 4e-06
gi|120587019 zinc finger protein 318 [Homo sapiens] 49 4e-06
gi|163965366 nascent polypeptide-associated complex alpha subuni... 49 5e-06
gi|239748756 PREDICTED: hypothetical protein XP_002346788 [Homo ... 49 6e-06
gi|239742799 PREDICTED: hypothetical protein XP_002342652 [Homo ... 49 6e-06
>gi|239748752 PREDICTED: hypothetical protein XP_002346787 [Homo
sapiens]
Length = 278
Score = 577 bits (1486), Expect = e-165
Identities = 278/278 (100%), Positives = 278/278 (100%)
Query: 1 MARVRGSGAAWRRVARAGRARLYKALPIAGGAVVDVEVRPRPPPARLPRNGRRGPLWKGR 60
MARVRGSGAAWRRVARAGRARLYKALPIAGGAVVDVEVRPRPPPARLPRNGRRGPLWKGR
Sbjct: 1 MARVRGSGAAWRRVARAGRARLYKALPIAGGAVVDVEVRPRPPPARLPRNGRRGPLWKGR 60
Query: 61 GPAGRAPAASAETALPRPREPPEPGAGPSPKRSPPPRAPRASSLAAPEPQVGDWTSREGR 120
GPAGRAPAASAETALPRPREPPEPGAGPSPKRSPPPRAPRASSLAAPEPQVGDWTSREGR
Sbjct: 61 GPAGRAPAASAETALPRPREPPEPGAGPSPKRSPPPRAPRASSLAAPEPQVGDWTSREGR 120
Query: 121 RGGPCLPGARRRLFSLSVSRSSGPPRARSCAPHPAREGMATTRGPEAGLRVSGRGARAGS 180
RGGPCLPGARRRLFSLSVSRSSGPPRARSCAPHPAREGMATTRGPEAGLRVSGRGARAGS
Sbjct: 121 RGGPCLPGARRRLFSLSVSRSSGPPRARSCAPHPAREGMATTRGPEAGLRVSGRGARAGS 180
Query: 181 STAPTRAQASPARPGFPPCLRSPPCPASSRAFRSCLSRAKAWDTAGQTAGQPSEKWEEGR 240
STAPTRAQASPARPGFPPCLRSPPCPASSRAFRSCLSRAKAWDTAGQTAGQPSEKWEEGR
Sbjct: 181 STAPTRAQASPARPGFPPCLRSPPCPASSRAFRSCLSRAKAWDTAGQTAGQPSEKWEEGR 240
Query: 241 KQWRKEGLLGRSALGSWTRWVLLRGLRSGLGETARPEN 278
KQWRKEGLLGRSALGSWTRWVLLRGLRSGLGETARPEN
Sbjct: 241 KQWRKEGLLGRSALGSWTRWVLLRGLRSGLGETARPEN 278
>gi|19924099 synapsin I isoform Ia [Homo sapiens]
Length = 705
Score = 54.3 bits (129), Expect = 1e-07
Identities = 49/178 (27%), Positives = 65/178 (36%), Gaps = 20/178 (11%)
Query: 39 RPRPPPARLPRNGRRGPLWKGRGPAGRAPAASAETALPRPREPPE----------PGAGP 88
+P PPA+ + GP G GP + P + R PP+ P P
Sbjct: 451 QPAGPPAQQRPPPQGGPPQPGPGPQRQGPPL-------QQRPPPQGQQHLSGLGPPAGSP 503
Query: 89 SPKRSPPPR-APRASSLAAPEPQVGDWTSREGRRGGPCLPGARRRLFSLSVSRSSGPPRA 147
P+R P P AP+ + A P G GGP P A R S S R +GPP+A
Sbjct: 504 LPQRLPSPTSAPQQPASQAAPPTQGQGRQSRPVAGGPGAPPAARPPASPSPQRQAGPPQA 563
Query: 148 RSCAPHPAREGMATTRGPEAGLRVSGRGARAGSSTAPTR--AQASPARPGFPPCLRSP 203
+ P G + G + PTR +QA P PP + P
Sbjct: 564 TRQTSVSGPAPPKASGAPPGGQQRQGPPQKPPGPAGPTRQASQAGPVPRTGPPTTQQP 621
Score = 46.2 bits (108), Expect = 3e-05
Identities = 39/138 (28%), Positives = 56/138 (40%), Gaps = 24/138 (17%)
Query: 27 PIAGGAVVDVEVRPRPPPARLPRNGRRGPLWKGRGPAGRAPAASAETALPRPREPPEPGA 86
P+AGG RP PA + GP P A+ +T++ P P GA
Sbjct: 535 PVAGGPGAPPAARP---PASPSPQRQAGP-----------PQATRQTSVSGPAPPKASGA 580
Query: 87 GPS-------PKRSPPPRAP-RASSLAAPEPQVGDWTSREGRRGGPCLPGARRRLFSLSV 138
P P++ P P P R +S A P P+ G T+++ R GP G + +
Sbjct: 581 PPGGQQRQGPPQKPPGPAGPTRQASQAGPVPRTGPPTTQQPRPSGPGPAGRPKPQLAQKP 640
Query: 139 SRSSGPPRARSCA--PHP 154
S+ PP + PHP
Sbjct: 641 SQDVPPPATAAAGGPPHP 658
Score = 42.4 bits (98), Expect = 5e-04
Identities = 47/177 (26%), Positives = 64/177 (36%), Gaps = 51/177 (28%)
Query: 47 LPRNGRRGPLWKGRGPAGRAPAASAETALPRPREPPEPGAGPSPKRSPPPRAPRASSLAA 106
LPR +R GRG G+ P+ A LP R+ + AGP ++ PPP+
Sbjct: 418 LPRQRQRDAS-PGRGSHGQTPSPGA---LPLGRQTSQQPAGPPAQQRPPPQ--------- 464
Query: 107 PEPQVGDWTSREGRRGGPCLPGARRRLFSLSVSRSSGPPRARSCAPHPAREGMATTRGPE 166
GGP PG + GPP + P P + + GP
Sbjct: 465 ---------------GGPPQPGPG--------PQRQGPPLQQ--RPPPQGQQHLSGLGPP 499
Query: 167 AGLRV--------SGRGARAGSSTAPTRAQASPAR-----PGFPPCLRSPPCPASSR 210
AG + S A + PT+ Q +R PG PP R P P+ R
Sbjct: 500 AGSPLPQRLPSPTSAPQQPASQAAPPTQGQGRQSRPVAGGPGAPPAARPPASPSPQR 556
Score = 29.6 bits (65), Expect = 3.0
Identities = 16/51 (31%), Positives = 19/51 (37%)
Query: 73 TALPRPREPPEPGAGPSPKRSPPPRAPRASSLAAPEPQVGDWTSREGRRGG 123
T L RP+ PP P SP +P P A + P G GG
Sbjct: 23 TDLQRPQPPPPPPGAHSPGATPGPGTATAERSSGVAPAASPAAPSPGSSGG 73
>gi|19924097 synapsin I isoform Ib [Homo sapiens]
Length = 669
Score = 54.3 bits (129), Expect = 1e-07
Identities = 49/178 (27%), Positives = 65/178 (36%), Gaps = 20/178 (11%)
Query: 39 RPRPPPARLPRNGRRGPLWKGRGPAGRAPAASAETALPRPREPPE----------PGAGP 88
+P PPA+ + GP G GP + P + R PP+ P P
Sbjct: 451 QPAGPPAQQRPPPQGGPPQPGPGPQRQGPPL-------QQRPPPQGQQHLSGLGPPAGSP 503
Query: 89 SPKRSPPPR-APRASSLAAPEPQVGDWTSREGRRGGPCLPGARRRLFSLSVSRSSGPPRA 147
P+R P P AP+ + A P G GGP P A R S S R +GPP+A
Sbjct: 504 LPQRLPSPTSAPQQPASQAAPPTQGQGRQSRPVAGGPGAPPAARPPASPSPQRQAGPPQA 563
Query: 148 RSCAPHPAREGMATTRGPEAGLRVSGRGARAGSSTAPTR--AQASPARPGFPPCLRSP 203
+ P G + G + PTR +QA P PP + P
Sbjct: 564 TRQTSVSGPAPPKASGAPPGGQQRQGPPQKPPGPAGPTRQASQAGPVPRTGPPTTQQP 621
Score = 46.2 bits (108), Expect = 3e-05
Identities = 39/138 (28%), Positives = 56/138 (40%), Gaps = 24/138 (17%)
Query: 27 PIAGGAVVDVEVRPRPPPARLPRNGRRGPLWKGRGPAGRAPAASAETALPRPREPPEPGA 86
P+AGG RP PA + GP P A+ +T++ P P GA
Sbjct: 535 PVAGGPGAPPAARP---PASPSPQRQAGP-----------PQATRQTSVSGPAPPKASGA 580
Query: 87 GPS-------PKRSPPPRAP-RASSLAAPEPQVGDWTSREGRRGGPCLPGARRRLFSLSV 138
P P++ P P P R +S A P P+ G T+++ R GP G + +
Sbjct: 581 PPGGQQRQGPPQKPPGPAGPTRQASQAGPVPRTGPPTTQQPRPSGPGPAGRPKPQLAQKP 640
Query: 139 SRSSGPPRARSCA--PHP 154
S+ PP + PHP
Sbjct: 641 SQDVPPPATAAAGGPPHP 658
Score = 42.4 bits (98), Expect = 5e-04
Identities = 47/177 (26%), Positives = 64/177 (36%), Gaps = 51/177 (28%)
Query: 47 LPRNGRRGPLWKGRGPAGRAPAASAETALPRPREPPEPGAGPSPKRSPPPRAPRASSLAA 106
LPR +R GRG G+ P+ A LP R+ + AGP ++ PPP+
Sbjct: 418 LPRQRQRDAS-PGRGSHGQTPSPGA---LPLGRQTSQQPAGPPAQQRPPPQ--------- 464
Query: 107 PEPQVGDWTSREGRRGGPCLPGARRRLFSLSVSRSSGPPRARSCAPHPAREGMATTRGPE 166
GGP PG + GPP + P P + + GP
Sbjct: 465 ---------------GGPPQPGPG--------PQRQGPPLQQ--RPPPQGQQHLSGLGPP 499
Query: 167 AGLRV--------SGRGARAGSSTAPTRAQASPAR-----PGFPPCLRSPPCPASSR 210
AG + S A + PT+ Q +R PG PP R P P+ R
Sbjct: 500 AGSPLPQRLPSPTSAPQQPASQAAPPTQGQGRQSRPVAGGPGAPPAARPPASPSPQR 556
Score = 29.6 bits (65), Expect = 3.0
Identities = 16/51 (31%), Positives = 19/51 (37%)
Query: 73 TALPRPREPPEPGAGPSPKRSPPPRAPRASSLAAPEPQVGDWTSREGRRGG 123
T L RP+ PP P SP +P P A + P G GG
Sbjct: 23 TDLQRPQPPPPPPGAHSPGATPGPGTATAERSSGVAPAASPAAPSPGSSGG 73
>gi|13376335 hypothetical protein LOC79946 [Homo sapiens]
Length = 257
Score = 54.3 bits (129), Expect = 1e-07
Identities = 56/159 (35%), Positives = 72/159 (45%), Gaps = 29/159 (18%)
Query: 83 EPGAGPSPKRSPPPRAPRASSLAAPEPQVGDWTSREGRRGGPCLPGARRRLFSLSVSRSS 142
EP +G +R P ++ S AP +SR G G PC+ A RR +R+S
Sbjct: 13 EPRSGS--RRLPKAEGDKSGSAGAPSKN----SSRLG--GRPCMCTAGRR-----PNRAS 59
Query: 143 GPPRARSCAP---------HPAREGMATTRGPEAGLRVSGR-GARAGSSTAPTRAQASPA 192
G R RSC+P +P A+ GP A +R SGR +STAP R P
Sbjct: 60 GR-RRRSCSPAPTWPPLCCYPQSRPTASAAGPGACMRASGRPHGNTTASTAPPR-HPRPR 117
Query: 193 RPGFPPCLRSP-PC--PASSRAFRSC-LSRAKAWDTAGQ 227
RPG P +P PC PA A R C R + W AG+
Sbjct: 118 RPGGPALRPTPRPCAGPAPPPASRDCRCRRPRRWPRAGR 156
Score = 51.2 bits (121), Expect = 1e-06
Identities = 58/184 (31%), Positives = 68/184 (36%), Gaps = 49/184 (26%)
Query: 62 PAGRAPAASAETALPRPREPPEPGAGPSPKRSPPPRAPRAS-SLAAPEPQVGDWTSREGR 120
P G A++A PRPR P P P+P+ P P AS P+ R GR
Sbjct: 100 PHGNTTASTAPPRHPRPRRPGGPALRPTPRPCAGPAPPPASRDCRCRRPRRWPRAGRRGR 159
Query: 121 RGGPCLPGARRRLFSLSVSRSSGPPRARSCAPHPAREGMA-TTRG-PEAGLRVSGRGARA 178
R G C P SCA G A + RG P R S G+
Sbjct: 160 RAGACKP---------------------SCA------GAAWSARGAPLCSYRTSCAGS-C 191
Query: 179 GSSTAPTRAQASPARPGFPPCLRSPPCPASS--RAFRSCLSRAKAWDTA------GQTAG 230
G+ TAPT A P SP ASS R R+C S AW A TA
Sbjct: 192 GARTAPTPA----------PTCASPSAAASSCCRRRRACSSPTTAWSGACGAGPTAATAA 241
Query: 231 QPSE 234
QP +
Sbjct: 242 QPGK 245
Score = 35.0 bits (79), Expect = 0.072
Identities = 43/151 (28%), Positives = 55/151 (36%), Gaps = 5/151 (3%)
Query: 40 PRPPPARLPRNGRRGPLWKG-RGPAGRAPAASAETALPRPREPPEPGAGPSPKRSPPPRA 98
PR P R P P + GPA P AS + RPR P G + P
Sbjct: 111 PRHPRPRRPGGPALRPTPRPCAGPA--PPPASRDCRCRRPRRWPRAGRRGRRAGACKPSC 168
Query: 99 PRASSLAAPEPQVGDWTSREGRRGGPCLPGARRRLFSLSVSRSSGPPRARSCAPHPAREG 158
A+ A P TS G G P S S + SS R R+C+
Sbjct: 169 AGAAWSARGAPLCSYRTSCAGSCGARTAPTPAPTCASPSAAASSCCRRRRACSSPTTAWS 228
Query: 159 MATTRGPEAGLRVSGRGARAGSSTAPTRAQA 189
A GP A + + + S+ AP RA+A
Sbjct: 229 GACGAGPTAA--TAAQPGKPRSAAAPGRARA 257
>gi|190014636 hypothetical protein LOC286262 isoform 2 [Homo
sapiens]
Length = 678
Score = 53.9 bits (128), Expect = 2e-07
Identities = 71/259 (27%), Positives = 95/259 (36%), Gaps = 42/259 (16%)
Query: 3 RVRGSGAAWRRVARAGRARLYKALPIAGGAVVDVEVRPRPPPARLPRNG----RRGPLWK 58
R RG GAA R+ R R+ + +V+ +E P PPA P G R +
Sbjct: 7 RRRGGGAAGARLLERYR-RVPGVRALRADSVLIIETVPGFPPAP-PAPGAAQIRAAEVLV 64
Query: 59 GRGPAGRA---------PAASAETALPRPREPPEPGAGPSPKRSPPPRAPRASSLAAPEP 109
P GR PAA P PP P P+P R PPP AP S AAP P
Sbjct: 65 YGAPPGRVSRLLERFDPPAAPRRRGSPERARPPPPPPPPAPPR-PPPAAP--SPPAAPGP 121
Query: 110 QVGDWTSREGRRGGPCLPGARRRLFSLSVSRSSGPPRARSCAPHPAREGMATTRG----- 164
RGG PGARR F +S R H + G
Sbjct: 122 -----------RGGGASPGARRSDFLQKTGSNSFTVHPRGL--HRGAGARLLSNGHSAPE 168
Query: 165 PEAGLRVSGRGARAGSSTAPTRAQAS------PARPGFPPCLRSPPCPASSRAFRSCLSR 218
P AG G+ GS + ++ P PG P + P +++ + R C+S
Sbjct: 169 PRAGPANRLAGSPPGSGQWKPKVESGDPSLHPPPSPGTPSATPASPPASATPSQRQCVSA 228
Query: 219 AKAWDTAGQTAGQPSEKWE 237
A + + + + P E
Sbjct: 229 ATSTNDSFEIRPAPKPVME 247
>gi|190014638 hypothetical protein LOC286262 isoform 1 [Homo
sapiens]
Length = 650
Score = 53.9 bits (128), Expect = 2e-07
Identities = 71/259 (27%), Positives = 95/259 (36%), Gaps = 42/259 (16%)
Query: 3 RVRGSGAAWRRVARAGRARLYKALPIAGGAVVDVEVRPRPPPARLPRNG----RRGPLWK 58
R RG GAA R+ R R+ + +V+ +E P PPA P G R +
Sbjct: 7 RRRGGGAAGARLLERYR-RVPGVRALRADSVLIIETVPGFPPAP-PAPGAAQIRAAEVLV 64
Query: 59 GRGPAGRA---------PAASAETALPRPREPPEPGAGPSPKRSPPPRAPRASSLAAPEP 109
P GR PAA P PP P P+P R PPP AP S AAP P
Sbjct: 65 YGAPPGRVSRLLERFDPPAAPRRRGSPERARPPPPPPPPAPPR-PPPAAP--SPPAAPGP 121
Query: 110 QVGDWTSREGRRGGPCLPGARRRLFSLSVSRSSGPPRARSCAPHPAREGMATTRG----- 164
RGG PGARR F +S R H + G
Sbjct: 122 -----------RGGGASPGARRSDFLQKTGSNSFTVHPRGL--HRGAGARLLSNGHSAPE 168
Query: 165 PEAGLRVSGRGARAGSSTAPTRAQAS------PARPGFPPCLRSPPCPASSRAFRSCLSR 218
P AG G+ GS + ++ P PG P + P +++ + R C+S
Sbjct: 169 PRAGPANRLAGSPPGSGQWKPKVESGDPSLHPPPSPGTPSATPASPPASATPSQRQCVSA 228
Query: 219 AKAWDTAGQTAGQPSEKWE 237
A + + + + P E
Sbjct: 229 ATSTNDSFEIRPAPKPVME 247
>gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens]
Length = 904
Score = 52.8 bits (125), Expect = 3e-07
Identities = 53/171 (30%), Positives = 69/171 (40%), Gaps = 28/171 (16%)
Query: 40 PRPPPARL-----PRNGRRGPLWKGRGPA--GRAPAASAETALPRPREPPEPGAGPSPKR 92
P PPP R P R P+ K R P+ + S+ + R P+P SP
Sbjct: 627 PSPPPKRRVSHSPPPKQRSSPVTKRRSPSLSSKHRKGSSPSRSTREARSPQPNKRHSP-- 684
Query: 93 SPPPRAPRASSLAAPEPQVGDWTSREGRRGGPCLPGARRRLFSLSVSRSSGPPRARSCAP 152
SP PRAP+ SS P RRG P R+ S S S+ P R S P
Sbjct: 685 SPRPRAPQTSSSPPPV-----------RRGASSSPQRRQ-----SPSPSTRPIRRVSRTP 728
Query: 153 HPAREGMATTRGPEAGLRVSGRGARAGSSTAPTRAQASPARPGFPPCLRSP 203
P + A + P++ RVS + +GS P A P P P +SP
Sbjct: 729 EPKKIKKAASPSPQSVRRVSSSRSVSGS---PEPAAKKPPAPPSPVQSQSP 776
Score = 51.6 bits (122), Expect = 7e-07
Identities = 50/169 (29%), Positives = 61/169 (36%), Gaps = 24/169 (14%)
Query: 40 PRPPPARLPRNGRRGPLWKGRGPAGRAPAASAETALPRPRE----PPEPGAGPSPKRSPP 95
P PPP R + R P+ P T P PR PP PSP+R P
Sbjct: 550 PSPPPTR-----------RRRSPSPAPPPRRRRTPTPPPRRRTPSPPPRRRSPSPRRYSP 598
Query: 96 PRAPRASSLAAPEPQVGDWTSREGRRGGPCLPGARRRLFSLSVSRSSGPPRARSCAPHPA 155
P R S P+ + RR P P RR VS S PP+ RS +P
Sbjct: 599 PIQRRYSPSPPPKRRTASPPPPPKRRASPSPPPKRR------VSHSP-PPKQRS-SPVTK 650
Query: 156 REGMATTRGPEAGLRVSGRGARAGSSTAPTRAQASPARPGFPPCLRSPP 204
R + + G S R R S P + + RP P SPP
Sbjct: 651 RRSPSLSSKHRKGSSPS-RSTREARSPQPNKRHSPSPRPRAPQTSSSPP 698
Score = 43.1 bits (100), Expect = 3e-04
Identities = 44/155 (28%), Positives = 61/155 (39%), Gaps = 28/155 (18%)
Query: 78 PREPPEPGAGPSPKRSPPPRAPRASSLAAPEPQVGDWTSREGRRGGPCLPGARRRLFSLS 137
PR P P PSP+R PPR P P+ R R P RRR S S
Sbjct: 311 PRRRPSPRRRPSPRRRTPPRR------MPPPPR-----HRRSRS-----PVRRRRRSSAS 354
Query: 138 VSRSSGPPRARSCAPHPAREGMATTRGPEAGLRVSGRGARAGSSTAPTRAQASPARPGF- 196
+S SS + P + T+ P R+S S +P R + P+ P
Sbjct: 355 LSGSSSSSSSSRSRSPPKKPPKRTSSPPRKTRRLS-------PSASPPRRRHRPSPPATP 407
Query: 197 PPCLRSPPCPASSRAFRSCLSRAKAWDTAGQTAGQ 231
PP R P P S R +++ + G+T+G+
Sbjct: 408 PPKTRHSPTPQQSNRTR----KSRVSVSPGRTSGK 438
Score = 41.2 bits (95), Expect = 0.001
Identities = 43/155 (27%), Positives = 58/155 (37%), Gaps = 31/155 (20%)
Query: 77 RPREPPEPGAGPSPKR---------------SPPPRAPRASSLAAPEPQVGDWTSREGRR 121
R R P A PSP++ SPPP R S AP P+ + RR
Sbjct: 520 RRRHSPSRSASPSPRKRQKETSPRGRRRRSPSPPPTRRRRSPSPAPPPRRRRTPTPPPRR 579
Query: 122 GGPCLPGARR----RLFSLSVSR---SSGPPRARSCAPHPAREGMATTRGPEAGLRVSGR 174
P P RR R +S + R S PP+ R+ +P P + A+ P
Sbjct: 580 RTPSPPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPPKRRASPSPPP-------- 631
Query: 175 GARAGSSTAPTRAQASPARPGFPPCLRSPPCPASS 209
R S + P + ++SP P L S SS
Sbjct: 632 -KRRVSHSPPPKQRSSPVTKRRSPSLSSKHRKGSS 665
Score = 37.7 bits (86), Expect = 0.011
Identities = 62/251 (24%), Positives = 85/251 (33%), Gaps = 62/251 (24%)
Query: 12 RRVARAGRARLYKALPIAGGAVVDVEVRPRPPPARLPRNGRRGPLWKGRGPAGRAPAASA 71
RR R R + ++G + R R PP + P+ P R +P+AS
Sbjct: 339 RRSRSPVRRRRRSSASLSGSSSSSSSSRSRSPPKKPPKRTSSPP----RKTRRLSPSASP 394
Query: 72 ETALPRPREPPEPGAGPSPK--RSPPPRAP---------------------------RAS 102
PR R P P A P PK SP P+ R S
Sbjct: 395 ----PRRRHRPSPPATPPPKTRHSPTPQQSNRTRKSRVSVSPGRTSGKVTKHKGTEKRES 450
Query: 103 SLAAPEPQVGDWTSREGRRGGPCLPG---ARRRLF------------SLSVSRSSGPPRA 147
AP+P+ + + E +GG +RR + S S S P R+
Sbjct: 451 PSPAPKPRKVELSESEEDKGGKMAAADSVQQRRQYRRQNQQSSSDSGSSSSSEDERPKRS 510
Query: 148 --------RSCAPHPAREGMATTRGPEAGLRVSGRGARAGSSTAPTRAQASPARPGFPPC 199
R P+R + R + GR R+ S PTR + SP+ P PP
Sbjct: 511 HVKNGEVGRRRRHSPSRSASPSPRKRQKETSPRGRRRRS-PSPPPTRRRRSPS-PAPPPR 568
Query: 200 LRSPPCPASSR 210
R P P R
Sbjct: 569 RRRTPTPPPRR 579
Score = 37.4 bits (85), Expect = 0.015
Identities = 29/98 (29%), Positives = 42/98 (42%), Gaps = 13/98 (13%)
Query: 39 RPRPPPARLPRNGR----RGPLWKGRGPAGRAPAASAETALPRPREPPEPGAGPSPKRSP 94
R R PP R+P R R P+ + R + +S+ ++ R R PP+ P + S
Sbjct: 324 RRRTPPRRMPPPPRHRRSRSPVRRRRRSSASLSGSSSSSSSSRSRSPPKK---PPKRTSS 380
Query: 95 PPRAPRASSLAAPEPQVGDWTSREGRRGGPCLPGARRR 132
PPR R S +A P+ R R P P + R
Sbjct: 381 PPRKTRRLSPSASPPR------RRHRPSPPATPPPKTR 412
Score = 32.0 bits (71), Expect = 0.61
Identities = 20/79 (25%), Positives = 32/79 (40%), Gaps = 1/79 (1%)
Query: 42 PPPARLPRNGRRGPLWKGRGPAGRAPAASAETALPRPREPPEPGAGPSPKRSPPPRAP-R 100
P P ++ + P R + R+ + S E A +P PP P SP + P P +
Sbjct: 728 PEPKKIKKAASPSPQSVRRVSSSRSVSGSPEPAAKKPPAPPSPVQSQSPSTNWSPAVPVK 787
Query: 101 ASSLAAPEPQVGDWTSREG 119
+ P P + +EG
Sbjct: 788 KAKSPTPSPSPPRNSDQEG 806
>gi|239754042 PREDICTED: similar to hCG1646049 [Homo sapiens]
Length = 346
Score = 52.4 bits (124), Expect = 4e-07
Identities = 54/188 (28%), Positives = 66/188 (35%), Gaps = 30/188 (15%)
Query: 40 PRPPPARLPRNGRRGPLWKGRGPA--GRAPAA---------SAETALPRPREPPEPGAGP 88
P PP R + RGP +GR GR+ A SA TA P P P
Sbjct: 63 PAPPRERGESSSPRGPTLRGRAKTTRGRSQGAGATETSAGNSAATAAPHPTPASYPQGTI 122
Query: 89 SPKRSPPPRAPRASSLAAPEPQVGDWTSREGRRGGPCLPGARRRLFSLSVSRSSGPPRAR 148
SP + P PR R P ++ W + R P R+ L GPP
Sbjct: 123 SPPQLPAPRPKRFGGKQRPLWRIRGWETTVARLPEP-------RVGKL----GKGPP--- 168
Query: 149 SCAPHPAREGMATTRGPEAGLRVSGRGARAGSSTAPTRAQASPAR--PGFPPCLRSPPCP 206
P PA G G A + A A AP P R PG P CL +
Sbjct: 169 ---PRPAPPGTRCCPGARAAQLLREAAAAAQGLRAPAARLPEPTRRAPGRPGCLPTAAAA 225
Query: 207 ASSRAFRS 214
A+ +RS
Sbjct: 226 AADALWRS 233
Score = 37.0 bits (84), Expect = 0.019
Identities = 38/116 (32%), Positives = 49/116 (42%), Gaps = 10/116 (8%)
Query: 41 RPPPARLPRNGRRGPLWKGRGPAGRAPAASAETALPRPREPP-EPGAGPSPKRSPPPRAP 99
R P ARLP RR P GR AA+A AL R R P P SP+R+ P + P
Sbjct: 199 RAPAARLPEPTRRAP---GRPGCLPTAAAAAADALWRSRRAPLPPTEFLSPRRTRPRKHP 255
Query: 100 RASSLAAPEPQVGDWTSREGRRGGPCLPGARRR----LFSLSVSRSSGPPRARSCA 151
+ A + G RG P L + + S SR++G RA S +
Sbjct: 256 ERTRRPAQRLESG--CRGHCSRGAPALAPPKLSPPFPCLAQSASRAAGARRALSAS 309
>gi|239748572 PREDICTED: similar to hCG1646049 [Homo sapiens]
Length = 346
Score = 52.4 bits (124), Expect = 4e-07
Identities = 54/188 (28%), Positives = 66/188 (35%), Gaps = 30/188 (15%)
Query: 40 PRPPPARLPRNGRRGPLWKGRGPA--GRAPAA---------SAETALPRPREPPEPGAGP 88
P PP R + RGP +GR GR+ A SA TA P P P
Sbjct: 63 PAPPRERGESSSPRGPTLRGRAKTTRGRSQGAGATETSAGNSAATAAPHPTPASYPQGTI 122
Query: 89 SPKRSPPPRAPRASSLAAPEPQVGDWTSREGRRGGPCLPGARRRLFSLSVSRSSGPPRAR 148
SP + P PR R P ++ W + R P R+ L GPP
Sbjct: 123 SPPQLPAPRPKRFGGKQRPLWRIRGWETTVARLPEP-------RVGKL----GKGPP--- 168
Query: 149 SCAPHPAREGMATTRGPEAGLRVSGRGARAGSSTAPTRAQASPAR--PGFPPCLRSPPCP 206
P PA G G A + A A AP P R PG P CL +
Sbjct: 169 ---PRPAPPGTRCCPGARAAQLLREAAAAAQGLRAPAARLPEPTRRAPGRPGCLPTAAAA 225
Query: 207 ASSRAFRS 214
A+ +RS
Sbjct: 226 AADALWRS 233
Score = 37.0 bits (84), Expect = 0.019
Identities = 38/116 (32%), Positives = 49/116 (42%), Gaps = 10/116 (8%)
Query: 41 RPPPARLPRNGRRGPLWKGRGPAGRAPAASAETALPRPREPP-EPGAGPSPKRSPPPRAP 99
R P ARLP RR P GR AA+A AL R R P P SP+R+ P + P
Sbjct: 199 RAPAARLPEPTRRAP---GRPGCLPTAAAAAADALWRSRRAPLPPTEFLSPRRTRPRKHP 255
Query: 100 RASSLAAPEPQVGDWTSREGRRGGPCLPGARRR----LFSLSVSRSSGPPRARSCA 151
+ A + G RG P L + + S SR++G RA S +
Sbjct: 256 ERTRRPAQRLESG--CRGHCSRGAPALAPPKLSPPFPCLAQSASRAAGARRALSAS 309
>gi|169167670 PREDICTED: similar to hCG1646049 [Homo sapiens]
Length = 346
Score = 52.4 bits (124), Expect = 4e-07
Identities = 54/188 (28%), Positives = 66/188 (35%), Gaps = 30/188 (15%)
Query: 40 PRPPPARLPRNGRRGPLWKGRGPA--GRAPAA---------SAETALPRPREPPEPGAGP 88
P PP R + RGP +GR GR+ A SA TA P P P
Sbjct: 63 PAPPRERGESSSPRGPTLRGRAKTTRGRSQGAGATETSAGNSAATAAPHPTPASYPQGTI 122
Query: 89 SPKRSPPPRAPRASSLAAPEPQVGDWTSREGRRGGPCLPGARRRLFSLSVSRSSGPPRAR 148
SP + P PR R P ++ W + R P R+ L GPP
Sbjct: 123 SPPQLPAPRPKRFGGKQRPLWRIRGWETTVARLPEP-------RVGKL----GKGPP--- 168
Query: 149 SCAPHPAREGMATTRGPEAGLRVSGRGARAGSSTAPTRAQASPAR--PGFPPCLRSPPCP 206
P PA G G A + A A AP P R PG P CL +
Sbjct: 169 ---PRPAPPGTRCCPGARAAQLLREAAAAAQGLRAPAARLPEPTRRAPGRPGCLPTAAAA 225
Query: 207 ASSRAFRS 214
A+ +RS
Sbjct: 226 AADALWRS 233
Score = 37.0 bits (84), Expect = 0.019
Identities = 38/116 (32%), Positives = 49/116 (42%), Gaps = 10/116 (8%)
Query: 41 RPPPARLPRNGRRGPLWKGRGPAGRAPAASAETALPRPREPP-EPGAGPSPKRSPPPRAP 99
R P ARLP RR P GR AA+A AL R R P P SP+R+ P + P
Sbjct: 199 RAPAARLPEPTRRAP---GRPGCLPTAAAAAADALWRSRRAPLPPTEFLSPRRTRPRKHP 255
Query: 100 RASSLAAPEPQVGDWTSREGRRGGPCLPGARRR----LFSLSVSRSSGPPRARSCA 151
+ A + G RG P L + + S SR++G RA S +
Sbjct: 256 ERTRRPAQRLESG--CRGHCSRGAPALAPPKLSPPFPCLAQSASRAAGARRALSAS 309
>gi|110832843 TBP-associated factor 4 [Homo sapiens]
Length = 1085
Score = 52.4 bits (124), Expect = 4e-07
Identities = 53/177 (29%), Positives = 58/177 (32%), Gaps = 25/177 (14%)
Query: 28 IAGGAVVDVEVRPRPPPARLPRNGRRGPLWKGRGPAGRA---PAASAETALPRPREPPEP 84
+A A + PR P R G G PAG A PAA AE A EPP
Sbjct: 33 LAASAAHHHHLAPRTPEVRAAAAGALGNHVVSGSPAGAAGAGPAAPAEGAPGAAPEPPPA 92
Query: 85 G----AGPSPKRSPPPRAPRASSLAAPEPQVGDWTSREGRRGGPCLPGARRRLFSLSVSR 140
G G P+R PP R A P P G C P
Sbjct: 93 GRARPGGGGPQRPGPPSPRRPLVPAGPAPPAAKLRPPPEGSAGSCAP------------- 139
Query: 141 SSGPPRARSCA--PHPAREGMATTRGPEAGLRVSGRGARAGSSTAPTRAQASPARPG 195
P A + A P PA G A GP A +G G G P PA PG
Sbjct: 140 ---VPAAAAVAAGPEPAPAGPAKPAGPAALAARAGPGPGPGPGPGPGPGPGKPAGPG 193
Score = 43.5 bits (101), Expect = 2e-04
Identities = 52/184 (28%), Positives = 61/184 (33%), Gaps = 30/184 (16%)
Query: 36 VEVRPRPPPARL--PRNGRRGP---------LWKGRGPAGRAPAASAETALPRPREPPEP 84
V P PP A+L P G G + G PA PA A A R P P
Sbjct: 115 VPAGPAPPAAKLRPPPEGSAGSCAPVPAAAAVAAGPEPAPAGPAKPAGPAALAARAGPGP 174
Query: 85 GAGPSPKRSPPPRAPRASSLAAPEPQVGDWTSREGRRGGPCLPGARRRLFSLSVSRSSGP 144
G GP P P P P A + G L + + +VS +
Sbjct: 175 GPGPGPGPGPGPGKPAGPGAA------------QTLNGSAALLNSHHAA-APAVSLVNNG 221
Query: 145 PRARSCAPHPAREGMATTRGPEAGLRVSGRGARAGSSTAPTRAQASPARPGFPPCLRSPP 204
P A P PA G P G A AP A A+PA PP PP
Sbjct: 222 PAALLPLPKPAAPGTVIQTPPFVGAAAPPAPAAPSPPAAP--APAAPAAAPPPP----PP 275
Query: 205 CPAS 208
PA+
Sbjct: 276 APAT 279
Score = 39.7 bits (91), Expect = 0.003
Identities = 51/177 (28%), Positives = 65/177 (36%), Gaps = 24/177 (13%)
Query: 62 PAGRAPAASAETALPRP------REPPEPGAGP--SPKRSPPPRAPR----ASSLAAPEP 109
PA APAA A P P PP AGP + PPP A + A + AP P
Sbjct: 258 PAAPAPAAPAAAPPPPPPAPATLARPPGHPAGPPTAAPAVPPPAAAQNGGSAGAAPAPAP 317
Query: 110 QVGDWTSREGRRGGPCLPGARRRLFSLSVSRSSGPPRARSCAPHPAREGMATTRGPEAGL 169
G G+ G PGA + V ++ P R AP A+ A+ A
Sbjct: 318 AAGGPAGVSGQPG----PGAAAAAPAPGV-KAESPKRVVQAAPPAAQTLAASGPASTAAS 372
Query: 170 RVSGRGARAGSSTAPTRAQASPARPGFPPCLRSPPCPASSRAFRSCLSRAKAWDTAG 226
V G + P+ A P PG P L ++ A LSR T+G
Sbjct: 373 MVIGPTMQ---GALPSPAAVPPPAPGTPTGLPK----GAAGAVTQSLSRTPTATTSG 422
>gi|171543895 ataxin 2 [Homo sapiens]
Length = 1313
Score = 51.2 bits (121), Expect = 1e-06
Identities = 55/159 (34%), Positives = 58/159 (36%), Gaps = 37/159 (23%)
Query: 47 LPRNGRRGPLWKGRGPAGRAPAASAETALPRPREPPEPGAGPSPKRSPPPRAPRASSLAA 106
L R RR GRG G AP A PP PG GP P R P
Sbjct: 31 LQRPARRS----GRGGGGAAPGPYPSAA------PPPPGPGPPPSRQSSP---------- 70
Query: 107 PEPQVGDWTSREGRRGGPCLPGARRRLFSLSVSRSSGPPRARSCAPHPAREGMATTRGPE 166
P D G GG PG+RR L GPPR P A P
Sbjct: 71 --PSASDCFGSNGNGGGAFRPGSRRLL------GLGGPPRPFVVLLLPLASPGAP---PA 119
Query: 167 AGLRVSGRGARAGSSTAPTRAQASPARPGFPPCLRSPPC 205
A R S GARA +P R+ S ARP P C R P C
Sbjct: 120 APTRASPLGARA----SPPRSGVSLARPA-PGCPR-PAC 152
Score = 30.8 bits (68), Expect = 1.4
Identities = 21/82 (25%), Positives = 34/82 (41%), Gaps = 7/82 (8%)
Query: 43 PPARLPRNGRRGPLWKGRGPAGRAPAASAETALPRPREPPEPGAGPSPKRSPPPRAPRAS 102
P PR+ R+ + G P+G A+ +P E A P P SP P +P ++
Sbjct: 685 PKTHRPRSPRQNSI--GNTPSGPVLASPQAGIIPT-----EAVAMPIPAASPTPASPASN 737
Query: 103 SLAAPEPQVGDWTSREGRRGGP 124
P + D ++ R+ P
Sbjct: 738 RAVTPSSEAKDSRLQDQRQNSP 759
Score = 30.4 bits (67), Expect = 1.8
Identities = 47/203 (23%), Positives = 69/203 (33%), Gaps = 34/203 (16%)
Query: 62 PAGRAPA---ASAETALPRPREPPEPGAGPSPKRSPPPRAPRASSLAAPEPQVGDWTSRE 118
P+ R P+ + + PR P P + P + S PP P A AP V R
Sbjct: 559 PSSRPPSRYQSGPNSLPPRAATPTRPPSRPPSRPSRPPSHPSAHGSPAP---VSTMPKRM 615
Query: 119 GRRGGPCL-PGARRRLFSLSVSRSSGP-----------PRARSCAPHPAREGMA------ 160
G P + P A+R + VS G P + + P AR +
Sbjct: 616 SSEGPPRMSPKAQRHPRNHRVSAGRGSISSGLEFVSHNPPSEAATPPVARTSPSGGTWSS 675
Query: 161 ----------TTRGPEAGLRVSGRGARAGSSTAPTRAQASPARPGFPPCLRSPPCPASSR 210
T P + + S +G A +A P P + P PAS
Sbjct: 676 VVSGVPRLSPKTHRPRSPRQNSIGNTPSGPVLASPQAGIIPTEAVAMPIPAASPTPASPA 735
Query: 211 AFRSCLSRAKAWDTAGQTAGQPS 233
+ R+ ++A D+ Q Q S
Sbjct: 736 SNRAVTPSSEAKDSRLQDQRQNS 758
Score = 30.0 bits (66), Expect = 2.3
Identities = 24/77 (31%), Positives = 33/77 (42%), Gaps = 4/77 (5%)
Query: 141 SSGPPRARSCAPHPAREGMATTRGPEAGLRVSGRGARAGSSTAP---TRAQASPARPGFP 197
++ PR+ + A R A G + R + R R G AP A P PG P
Sbjct: 4 AAAAPRSPAVATESRRFAAARWPGWRSLQRPARRSGRGGGGAAPGPYPSAAPPPPGPGPP 63
Query: 198 PCLRSPPCPASSRAFRS 214
P +S P P++S F S
Sbjct: 64 PSRQSSP-PSASDCFGS 79
Score = 29.6 bits (65), Expect = 3.0
Identities = 34/122 (27%), Positives = 49/122 (40%), Gaps = 14/122 (11%)
Query: 82 PEPGAGPSPKRSPPPR--------APRASSLAAPEPQVGDWTSREGRRGGPCLPGARRRL 133
P P PSP PP R PRA++ P + SR P G+ +
Sbjct: 551 PWPSPCPSPSSRPPSRYQSGPNSLPPRAATPTRPPSRPPSRPSRPPSH--PSAHGSPAPV 608
Query: 134 FSLSVSRSS-GPPRARSCAP-HPAREGMATTRGP-EAGLRVSGRGARAGSSTAPTRAQAS 190
++ SS GPPR A HP ++ RG +GL + ++T P A+ S
Sbjct: 609 STMPKRMSSEGPPRMSPKAQRHPRNHRVSAGRGSISSGLEFVSHNPPSEAATPPV-ARTS 667
Query: 191 PA 192
P+
Sbjct: 668 PS 669
>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
Length = 2752
Score = 51.2 bits (121), Expect = 1e-06
Identities = 60/217 (27%), Positives = 77/217 (35%), Gaps = 30/217 (13%)
Query: 42 PPPARLPRNGRRGPLWKGRGPAGRAPAASAETALPRPREPPEPGAGPSPKRSPPPRAPRA 101
P P LPR R G KGRGP+ P S+ T SP+ P R R
Sbjct: 1627 PAPRALPRRSRSGSSSKGRGPS---PEGSSSTE-------------SSPEHPPKSRTARR 1670
Query: 102 SSLAAPEPQVGDWT--SREGRRGGPCLPGARRRLFSLSVSRSSGPPRARSCAPHPAREGM 159
S ++PEP+ T R R P L + RL S S SS P P R
Sbjct: 1671 GSRSSPEPKTKSRTPPRRRSSRSSPELT-RKARLSRRSRSASSSPETRSRTPPRHRRSPS 1729
Query: 160 ATTRGPEAGLRVSGRGARAGSSTAPTRAQASPARPGFPPCLRSP-PCPASSRAFRSCLSR 218
++ P R S R A S T ++ RSP P P + RS R
Sbjct: 1730 VSSPEPAEKSRSSRRRRSASSPRTKTTSRRG----------RSPSPKPRGLQRSRSRSRR 1779
Query: 219 AKAWDTAGQTAGQPSEKWEEGRKQWRKEGLLGRSALG 255
K T + S+ R++ R + R G
Sbjct: 1780 EKTRTTRRRDRSGSSQSTSRRRQRSRSRSRVTRRRRG 1816
Score = 43.5 bits (101), Expect = 2e-04
Identities = 62/228 (27%), Positives = 91/228 (39%), Gaps = 27/228 (11%)
Query: 35 DVEVRPRPPPARLPRNGRRGPL-WKGRGPAGRAPAASAETALPRPREPPEPGAG----PS 89
D + + R P + R+G + K R R+ + S+ +PR P +G P
Sbjct: 1564 DSKAKTRTPLRQRSRSGSSPEVDSKSRLSPRRSRSGSSPEVKDKPRAAPRAQSGSDSSPE 1623
Query: 90 PKRSPPPRAPRASSLAA------PEPQVGDWTSREGRRGGPCLPGARRRLFSLSVSRSSG 143
PK P PR S + P P+ G ++ P ARR SRSS
Sbjct: 1624 PKAPAPRALPRRSRSGSSSKGRGPSPE-GSSSTESSPEHPPKSRTARRG------SRSSP 1676
Query: 144 PPRARSCAPHPAREGMATTRGPEAGLRVSGRGARAGSSTAPTRAQASPARPGFPPCLRSP 203
P+ +S P P R ++ R+S R +R+ SS+ TR++ P P S
Sbjct: 1677 EPKTKSRTP-PRRRSSRSSPELTRKARLS-RRSRSASSSPETRSRTPPRHRRSPSV--SS 1732
Query: 204 PCPA----SSRAFRSCLS-RAKAWDTAGQTAGQPSEKWEEGRKQWRKE 246
P PA SSR RS S R K G++ + R + R+E
Sbjct: 1733 PEPAEKSRSSRRRRSASSPRTKTTSRRGRSPSPKPRGLQRSRSRSRRE 1780
Score = 42.7 bits (99), Expect = 3e-04
Identities = 54/191 (28%), Positives = 78/191 (40%), Gaps = 17/191 (8%)
Query: 12 RRVARAGRARLYKALPIAGGAVVDVEVRPRPPPARLPRNGRRGPLWKGRGPA-----GRA 66
R AR GR+R P G R R P R R+ R P +GR + GR+
Sbjct: 650 RTPARRGRSR--SRTPARRG-----RSRSRTPARRSGRSRSRTPARRGRSRSRTPRRGRS 702
Query: 67 PAAS-AETALPRPREPPEPG-AGPSPKRSPPPRAP--RASSLAAPEPQVGDWTSREGRRG 122
+ S R P G +G S +R R R+ S ++PE + +SR R
Sbjct: 703 RSRSLVRRGRSHSRTPQRRGRSGSSSERKNKSRTSQRRSRSNSSPEMKKSRISSRRSRSL 762
Query: 123 GPCLPGARRRLFSLSVSRSSGPPRARSCAPHPAREGMATTRGPEAGLRVSGRGARAGSST 182
A+ RL SL S S P + + P R + + P+A R R +R+ SS
Sbjct: 763 SSPRSKAKSRL-SLRRSLSGSSPCPKQKSQTPPRRSRSGSSQPKAKSRTPPRRSRSSSSP 821
Query: 183 APTRAQASPAR 193
P + +P+R
Sbjct: 822 PPKQKSKTPSR 832
Score = 40.0 bits (92), Expect = 0.002
Identities = 36/158 (22%), Positives = 66/158 (41%), Gaps = 15/158 (9%)
Query: 37 EVRPRPPPARLPRNGRRGPLWKGRGPAGRAPAASAETALPRPREPPEPGAGPSPKRSPPP 96
+ + R PP R + P K + P+ ++ ++S+ + PP G+ SP+ +
Sbjct: 805 KAKSRTPPRRSRSSSSPPPKQKSKTPSRQSHSSSSPHPKVKSGTPPRQGSITSPQANEQS 864
Query: 97 RAPRASSL--AAPEPQVGDWTSREGRRGGPCLPGARRRLFSLSVSRSSGPPR---ARSCA 151
P+ S ++P+P++ T G P +SS PPR +RS +
Sbjct: 865 VTPQRRSCFESSPDPELKSRTPSRHSCSGSSPPRV----------KSSTPPRQSPSRSSS 914
Query: 152 PHPAREGMATTRGPEAGLRVSGRGARAGSSTAPTRAQA 189
P P + + + R S +R S T P R+++
Sbjct: 915 PQPKVKAIISPRQRSHSGSSSPSPSRVTSRTTPRRSRS 952
Score = 39.7 bits (91), Expect = 0.003
Identities = 63/229 (27%), Positives = 89/229 (38%), Gaps = 43/229 (18%)
Query: 39 RPRPPPARL---PRNGRRGPLWKGRGPAGRAPAASAETALPRPREPPEPGAGPSPKRSP- 94
RP P P R P PL R G +P A T L + P A P+ RSP
Sbjct: 349 RPSPSPERSSTGPEPPAPTPLLAERH--GGSPQPLATTPLSQEPVNPPSEASPTRDRSPP 406
Query: 95 --PPRAPRASS--LAAPEPQVGD-----WTSREGRRGGPCLPGARRRLFSLSVSRSSGPP 145
P + P++SS + P PQ +S E + P PG+ R + S S++
Sbjct: 407 KSPEKLPQSSSSESSPPSPQPTKVSRHASSSPESPKPAPA-PGSHREISSSPTSKNRSHG 465
Query: 146 RA---------------RSCAPHPAREGMATTRGP---------EAGLRVSGRGARAGSS 181
RA RS +P A+ G + +R P R S R G S
Sbjct: 466 RAKRDKSHSHTPSRRMGRSRSPATAKRGRSRSRTPTKRGHSRSRSPQWRRSRSAQRWGRS 525
Query: 182 TAPTR--AQASPARPGFPPCLRSPPCPASSRAFRSCLSRAKAWDTAGQT 228
+P R SP RPG+ R+ SR+ R S +++ T G++
Sbjct: 526 RSPQRRGRSRSPQRPGWSRS-RNTQRRGRSRSARRGRSHSRSPATRGRS 573
Score = 39.3 bits (90), Expect = 0.004
Identities = 49/184 (26%), Positives = 66/184 (35%), Gaps = 24/184 (13%)
Query: 45 ARLPRNGRRGPLWKGRGPAGRAPAASAETALPRPREPPEPGAGPSPKRSPPPRAPRASSL 104
+R P +RG + R P R + S R R G SP+R R+P+
Sbjct: 484 SRSPATAKRGRS-RSRTPTKRGHSRSRSPQWRRSRSAQRWGRSRSPQRRGRSRSPQRPGW 542
Query: 105 AAPEPQVGDWTSREGRRG-----GPCLPG------------ARRRLFSLSVSRSSGPPRA 147
+ SR RRG P G +R R + SRS P R
Sbjct: 543 SRSRNTQRRGRSRSARRGRSHSRSPATRGRSRSRTPARRGRSRSRTPARRRSRSRTPTRR 602
Query: 148 RSCAPHPAREGMATTRGPEAGLRVSGRGARAGSSTAPTRAQASPARPGFPPCLRSPPCPA 207
RS + PAR G + +R P + R +R S SPAR R+P
Sbjct: 603 RSRSRTPARRGRSRSRTP------ARRRSRTRSPVRRRSRSRSPARRSGRSRSRTPARRG 656
Query: 208 SSRA 211
SR+
Sbjct: 657 RSRS 660
Score = 39.3 bits (90), Expect = 0.004
Identities = 52/178 (29%), Positives = 70/178 (39%), Gaps = 22/178 (12%)
Query: 42 PPPARLPRNGRRGPLWKGRGPAGRAPAASAETALPRPREPPEPGAGPSPKRSPPPRAPRA 101
PP R R P+ + R + +P + R R P + SP R R+
Sbjct: 1963 PPVTRRRSRSRTSPITRRRSRSRTSPVTRRRS---RSRTSPVTRRRSRSRTSPVTRR-RS 2018
Query: 102 SSLAAPEPQVGDWTSREGRRGGPCLPGARRRLFS-LSVSRSSGPPRARSCAPHPAREGMA 160
S P + R R P LP R R S L++ R R+RS P AR +
Sbjct: 2019 RSRTPPAIR------RRSRSRTPLLPRKRSRSRSPLAIRR-----RSRSRTPRTARGKRS 2067
Query: 161 TTRGPEAGLRVSGRGARAGSSTAPTRAQASPARPGFPPCLRSPPCPASSRAFRSCLSR 218
TR P A R S +GSS+ +R+ PA R+PP +S SC SR
Sbjct: 2068 LTRSPPAIRRRSA----SGSSSDRSRSATPPATRNHSGS-RTPPVALNSSRM-SCFSR 2119
Score = 38.5 bits (88), Expect = 0.007
Identities = 51/174 (29%), Positives = 63/174 (36%), Gaps = 21/174 (12%)
Query: 42 PPPARLPRNGRR---GPLWKGRGPAGRAPAASAETALP-----RPREPPEPGAGPSPKRS 93
P PA P + R P K R GRA + + P R R P G S R+
Sbjct: 441 PKPAPAPGSHREISSSPTSKNRSH-GRAKRDKSHSHTPSRRMGRSRSPATAKRGRSRSRT 499
Query: 94 PPPRAPRAS-------SLAAPEPQVGDWTSREGRRGGPCLPGARRRLFSLSVSRSSGPPR 146
P R S S +A R GR P PG R + RS R
Sbjct: 500 PTKRGHSRSRSPQWRRSRSAQRWGRSRSPQRRGRSRSPQRPGWSRSRNTQRRGRSRSARR 559
Query: 147 ARSCAPHPAREGMATTRGPEAGLRVSGR--GARAGSSTAPTRAQA---SPARPG 195
RS + PA G + +R P R R R S PTR ++ +PAR G
Sbjct: 560 GRSHSRSPATRGRSRSRTPARRGRSRSRTPARRRSRSRTPTRRRSRSRTPARRG 613
Score = 37.7 bits (86), Expect = 0.011
Identities = 46/181 (25%), Positives = 71/181 (39%), Gaps = 26/181 (14%)
Query: 44 PARLPRNGRRGPLWKGRGPAGRAPAASAETALPRPREPPEPG---AGPSPK-RSPPPRAP 99
P R R+G P K R P R+ ++S+ + + P + P PK +S P P
Sbjct: 793 PPRRSRSGSSQPKAKSRTPPRRSRSSSSPPPKQKSKTPSRQSHSSSSPHPKVKSGTP--P 850
Query: 100 RASSLAAPEPQVGDWTSREGRRGGPCL-----PGARRRLFSLSVSRSSGPPRARSCAPHP 154
R S+ +P Q + + RR C P + R S S PPR +S P
Sbjct: 851 RQGSITSP--QANEQSVTPQRRS--CFESSPDPELKSRTPSRHSCSGSSPPRVKSSTPPR 906
Query: 155 AREGMATTRGPEAGLRVSGRGARAGSSTAPTRAQASPARPGFPPCLRSPPCPASSRAFRS 214
+++ P+ +S R S++P SP+R + S P SR+
Sbjct: 907 QSPSRSSSPQPKVKAIISPRQRSHSGSSSP-----SPSR------VTSRTTPRRSRSVSP 955
Query: 215 C 215
C
Sbjct: 956 C 956
Score = 36.6 bits (83), Expect = 0.025
Identities = 57/193 (29%), Positives = 71/193 (36%), Gaps = 29/193 (15%)
Query: 27 PIAGGAVVDVEVRPRPPPARLPRNGRRGPLWKGRGPAG-RAPAASAETALPRPREPPEPG 85
P A A+ R P+ + R P AG R PAA A +L PP
Sbjct: 2262 PAAAAAMNLASPRTAVAPSAVNLADPRTPTAPAVNLAGARTPAALAALSLTGSGTPPTAA 2321
Query: 86 AGPSPKRSPPPRA------PRASSLAAPEPQVGDWT-------SREGRRGGPCLPGAR-- 130
PS R+P A PR++ AP G T S R P L GA
Sbjct: 2322 NYPSSSRTPQAPASANLVGPRSAHATAPVNIAGSRTAAALAPASLTSARMAPALSGANLT 2381
Query: 131 -RRLFSLSVSRSSG---PP---RARSCAP--HPAREGMATTRGPEAGLRVSGRGARAGSS 181
R+ + R SG PP RARS P P++ M + R P S R +A S
Sbjct: 2382 SPRVPLSAYERVSGRTSPPLLDRARSRTPPSAPSQSRMTSERAPSP----SSRMGQAPSQ 2437
Query: 182 TAPTRAQASPARP 194
+ AQ P P
Sbjct: 2438 SLLPPAQDQPRSP 2450
Score = 35.8 bits (81), Expect = 0.042
Identities = 57/225 (25%), Positives = 83/225 (36%), Gaps = 36/225 (16%)
Query: 44 PARLPRNGRRGPLWKGRG-PAGRAPAASAETALPRPREPP----EPGAGPSPKRSPPPRA 98
P+R R+G L G G P+ + + S+ PR P E + P PK P
Sbjct: 1435 PSRRSRSGSSPGLRDGSGTPSRHSLSGSSPGMKDIPRTPSRGRSECDSSPEPKALPQTPR 1494
Query: 99 PRASSLAAPEPQVGDWTSREGRRGGPCLP----------GARRRLFS---LSVSRSSGP- 144
PR+ S ++PE T + R G G R R S L V S+ P
Sbjct: 1495 PRSRSPSSPELNNKCLTPQRERSGSESSVDQKTVARTPLGQRSRSGSSQELDVKPSASPQ 1554
Query: 145 --------PRARSCAPHPAREGMATTRGPE--AGLRVSGRGARAGSS-------TAPTRA 187
P +++ P R+ + PE + R+S R +R+GSS A RA
Sbjct: 1555 ERSESDSSPDSKAKTRTPLRQRSRSGSSPEVDSKSRLSPRRSRSGSSPEVKDKPRAAPRA 1614
Query: 188 QASPARPGFPPCLRSPPCPASSRAFRSCLSRAKAWDTAGQTAGQP 232
Q+ P P SR+ S R + + + T P
Sbjct: 1615 QSGSDSSPEPKAPAPRALPRRSRSGSSSKGRGPSPEGSSSTESSP 1659
Score = 34.7 bits (78), Expect = 0.094
Identities = 56/189 (29%), Positives = 73/189 (38%), Gaps = 24/189 (12%)
Query: 18 GRARLYKALPIAGGAVVDVEVRPRPPPARLPRNGRRGPLWKGRGPAGRAPAASAETA-LP 76
G AR ++ AG A +V P P P R L A R PAASA L
Sbjct: 2191 GTARPPPSMSAAGLAARMSQV-PAPVPLMSLRTAPAANL------ASRIPAASAAAMNLA 2243
Query: 77 RPREPPEPGAGPSPKRSPPPRAPRASSLAAPEPQVGDWTSREGRRGGPCLP-----GARR 131
R P P A + S P A A +LA+P V P P GAR
Sbjct: 2244 SARTPAIPTA-VNLADSRTPAAAAAMNLASPRTAVAPSAVNLADPRTPTAPAVNLAGART 2302
Query: 132 --RLFSLSVSRSSGPPRARSCAPHPAREGMATTRGPEAGLRVSGRGARAGSSTAPTRAQA 189
L +LS++ S PP A A +P+ ++R P+A + G R+ +TAP
Sbjct: 2303 PAALAALSLTGSGTPPTA---ANYPS-----SSRTPQAPASANLVGPRSAHATAPVNIAG 2354
Query: 190 SPARPGFPP 198
S P
Sbjct: 2355 SRTAAALAP 2363
Score = 34.3 bits (77), Expect = 0.12
Identities = 50/188 (26%), Positives = 67/188 (35%), Gaps = 16/188 (8%)
Query: 39 RPRPPPARLPRNGRRGPLWKGRGPAGRAPAASAETALPRPREP----PEPGAGPSPKRSP 94
R R P R R+ R P +GR + + T P R P +G S R+P
Sbjct: 595 RSRTPTRRRSRS--RTPARRGRSRSRTPARRRSRTRSPVRRRSRSRSPARRSGRSRSRTP 652
Query: 95 PPRAPRASSLAAPEPQVGDWT-SREGRRGGPCLPGARRRLFSLSVSRSSGPPRARSCAPH 153
R S A + T +R R P R R SRS P R RS +
Sbjct: 653 ARRGRSRSRTPARRGRSRSRTPARRSGRSRSRTPARRGR------SRSRTPRRGRSRSRS 706
Query: 154 PAREGMATTRGPEAGLRVSGRGARAGSSTAPTRAQASPARPGFPPCLRSPPCPASSRAFR 213
R G + +R P+ R R S R S + P +S SR+
Sbjct: 707 LVRRGRSHSRTPQRRGRSGSSSERKNKSRTSQRRSRSNSSPEMK---KSRISSRRSRSLS 763
Query: 214 SCLSRAKA 221
S S+AK+
Sbjct: 764 SPRSKAKS 771
Score = 33.1 bits (74), Expect = 0.27
Identities = 29/97 (29%), Positives = 38/97 (39%), Gaps = 7/97 (7%)
Query: 55 PLWKGRGPAGRAPAASAETALPR---PREPPEPGAGPSPKR----SPPPRAPRASSLAAP 107
P K R P+ + + S+ + PR+ P + P PK SP R+ SS +P
Sbjct: 879 PELKSRTPSRHSCSGSSPPRVKSSTPPRQSPSRSSSPQPKVKAIISPRQRSHSGSSSPSP 938
Query: 108 EPQVGDWTSREGRRGGPCLPGARRRLFSLSVSRSSGP 144
T R R PC R L S S SS P
Sbjct: 939 SRVTSRTTPRRSRSVSPCSNVESRLLPRYSHSGSSSP 975
Score = 32.0 bits (71), Expect = 0.61
Identities = 48/204 (23%), Positives = 73/204 (35%), Gaps = 19/204 (9%)
Query: 7 SGAAWRRVARAGRARLYKALPIAGGAVVDVEVRPRPPPARLPRNGRRGPLWKGRGPAGRA 66
SGA + AG ++P G DV P A+ P K R + +
Sbjct: 2477 SGAVATTTSSAGDHNGMLSVPAPGVPHSDVGEPPASTGAQQPSALAALQPAKERRSSSSS 2536
Query: 67 PAASAETALPRPREPPEPGAGPSPKRSPP---PRAPRASSLAAPEPQVGDWTS-REGRRG 122
++S+ ++ +G S S P P + P P + REGR
Sbjct: 2537 SSSSSSSSSSSSSSSSSSSSGSSSSDSEGSSLPVQPEVALKRVPSPTPAPKEAVREGRPP 2596
Query: 123 GPCLPGARRRLFSLSVSRSSGPPRARSCAPHPAREGMATTRGPEAGLRVSGRGARAGSST 182
P P R+R S S S SS + S + + S + + SS+
Sbjct: 2597 EP-TPAKRKRRSSSSSSSSSSSSSSSSSSSSSSSSS-------------SSSSSSSSSSS 2642
Query: 183 APTRAQASPARPGFPPCLRSPPCP 206
+ + + SPA+PG P L P P
Sbjct: 2643 SSSSSSPSPAKPG-PQALPKPASP 2665
Score = 31.6 bits (70), Expect = 0.80
Identities = 25/86 (29%), Positives = 32/86 (37%), Gaps = 19/86 (22%)
Query: 66 APAASAETALPRPREPPEPGAGPSPKRSP----------------PPRAPRASSLAAPEP 109
+PA ALP+P P +P G RSP P R S +P
Sbjct: 2650 SPAKPGPQALPKPASPKKPPPGERRSRSPRKPIDSLRDSRSLSYSPVERRRPSPQPSPRD 2709
Query: 110 QVGDWT---SREGRRGGPCLPGARRR 132
Q + SR G+RG P +RR
Sbjct: 2710 QQSSSSERGSRRGQRGDSRSPSHKRR 2735
Score = 28.1 bits (61), Expect = 8.8
Identities = 22/65 (33%), Positives = 28/65 (43%), Gaps = 2/65 (3%)
Query: 39 RPRPPPARLPRNGRRGPLWKGRGPAGRAPAASAETALPRPREPPEPGAGPSPKRSPPPRA 98
R R PPA R+ R PL + R+P A + R R P S RSPP
Sbjct: 2019 RSRTPPAIRRRSRSRTPLLPRKRSRSRSPLAIRRRS--RSRTPRTARGKRSLTRSPPAIR 2076
Query: 99 PRASS 103
R++S
Sbjct: 2077 RRSAS 2081
>gi|237757310 synaptojanin 1 isoform a [Homo sapiens]
Length = 1612
Score = 50.1 bits (118), Expect = 2e-06
Identities = 62/212 (29%), Positives = 80/212 (37%), Gaps = 47/212 (22%)
Query: 28 IAGGAVVDVEVRPRPPPARLPRNGRRGPLWKGRGPAGRAPAASAETALP----RPREPPE 83
I+ G V + +RP P+R P GP P PA P P+ PP
Sbjct: 1095 ISEGPVPSLPIRPSRAPSRTP-----GPPSAQSSPIDAQPATPLPQKDPAQPLEPKRPPP 1149
Query: 84 PGAGPSPKR-SPPPRAPRASSLAAPEPQVGDWTSRE-GRRGGPCLPGARRRLFSL----- 136
P P R +PP R P S +P P T +E G G P PG RR
Sbjct: 1150 PRPVAPPTRPAPPQRPPPPSGARSPAP-----TRKEFGGIGAPPSPGVARREMEAPKSPG 1204
Query: 137 -----SVSRSSGPPRARSCAPHPAREGMATTR---GPEAGL---RVSGRGARAGSSTAPT 185
++ RS P+A P PA G +T R P AG+ S A AG T +
Sbjct: 1205 TTRKDNIGRSQPSPQAGLAGPGPA--GYSTARPTIPPRAGVISAPQSHARASAGRLTPES 1262
Query: 186 RAQAS-----------PARP--GFPPCLRSPP 204
+++ S P +P FPP PP
Sbjct: 1263 QSKTSETSKGSTFLPEPLKPQAAFPPQSSLPP 1294
Score = 35.0 bits (79), Expect = 0.072
Identities = 27/88 (30%), Positives = 36/88 (40%), Gaps = 11/88 (12%)
Query: 40 PRPPPARLPRNGRRGPLWKGRGPAGRAPAASAETALPRPREPPEPGAGPSPKRSPPPRAP 99
P P A P P PA R A P P+ P+P P+ PPPR+
Sbjct: 1279 PLKPQAAFPPQSSLPP------PAQRLQEPLVPVAAPMPQSGPQPNLETPPQ--PPPRSR 1330
Query: 100 RASSL---AAPEPQVGDWTSREGRRGGP 124
+ SL A+ +PQV +G+R P
Sbjct: 1331 SSHSLPSEASSQPQVKTNGISDGKRESP 1358
>gi|237757308 synaptojanin 1 isoform b [Homo sapiens]
Length = 1350
Score = 50.1 bits (118), Expect = 2e-06
Identities = 62/212 (29%), Positives = 80/212 (37%), Gaps = 47/212 (22%)
Query: 28 IAGGAVVDVEVRPRPPPARLPRNGRRGPLWKGRGPAGRAPAASAETALP----RPREPPE 83
I+ G V + +RP P+R P GP P PA P P+ PP
Sbjct: 1095 ISEGPVPSLPIRPSRAPSRTP-----GPPSAQSSPIDAQPATPLPQKDPAQPLEPKRPPP 1149
Query: 84 PGAGPSPKR-SPPPRAPRASSLAAPEPQVGDWTSRE-GRRGGPCLPGARRRLFSL----- 136
P P R +PP R P S +P P T +E G G P PG RR
Sbjct: 1150 PRPVAPPTRPAPPQRPPPPSGARSPAP-----TRKEFGGIGAPPSPGVARREMEAPKSPG 1204
Query: 137 -----SVSRSSGPPRARSCAPHPAREGMATTR---GPEAGL---RVSGRGARAGSSTAPT 185
++ RS P+A P PA G +T R P AG+ S A AG T +
Sbjct: 1205 TTRKDNIGRSQPSPQAGLAGPGPA--GYSTARPTIPPRAGVISAPQSHARASAGRLTPES 1262
Query: 186 RAQAS-----------PARP--GFPPCLRSPP 204
+++ S P +P FPP PP
Sbjct: 1263 QSKTSETSKGSTFLPEPLKPQAAFPPQSSLPP 1294
Score = 30.4 bits (67), Expect = 1.8
Identities = 23/74 (31%), Positives = 30/74 (40%), Gaps = 11/74 (14%)
Query: 40 PRPPPARLPRNGRRGPLWKGRGPAGRAPAASAETALPRPREPPEPGAGPSPKRSPPPRAP 99
P P A P P PA R A P P+ P+P P+ PPPR+
Sbjct: 1279 PLKPQAAFPPQSSLPP------PAQRLQEPLVPVAAPMPQSGPQPNLETPPQ--PPPRSR 1330
Query: 100 RASSL---AAPEPQ 110
+ SL A+ +PQ
Sbjct: 1331 SSHSLPSEASSQPQ 1344
>gi|37537692 proline-rich protein BstNI subfamily 4 precursor [Homo
sapiens]
Length = 247
Score = 50.1 bits (118), Expect = 2e-06
Identities = 52/179 (29%), Positives = 68/179 (37%), Gaps = 38/179 (21%)
Query: 39 RPRPPPARL----PRNGRR--GPLWKGRGPAGRAPAASAETALP-----RPREPPEPGAG 87
RP PPP + P+ G + GP P GR P ++ P +P PP G
Sbjct: 49 RPPPPPGKPQGPPPQGGNQSQGPPPPPGKPEGRPPQGGNQSQGPPPHPGKPERPPPQGGN 108
Query: 88 PSPKRSPPPRAPRASSLAAPEPQVGDWTSREGRRGGPCLPGARRRLFSLSVSRSSGPPRA 147
S PPP P P PQ G+ + R P PG R ++S GPP
Sbjct: 109 QSQGTPPPPGKPE-----RPPPQGGNQSHRP-----PPPPGKPERPPPQGGNQSQGPP-- 156
Query: 148 RSCAPHPAREGMATTRGPEAGLRVSGRGARAGSSTAPTRAQASPARPGFPPCLRSPPCP 206
PHP + PE G +R+ S P + Q P + G P + PP P
Sbjct: 157 ----PHPGK--------PEGPPPQEGNKSRSARS-PPGKPQGPPQQEGNKP--QGPPPP 200
Score = 34.3 bits (77), Expect = 0.12
Identities = 46/183 (25%), Positives = 62/183 (33%), Gaps = 28/183 (15%)
Query: 62 PAGRAPAASAETALPRPREPPEPGAGPSPKRSPPPRAPRASSLAAPEPQVGDWTSREG-- 119
P GR P + P+ PP P P + PPP+ S P P + +G
Sbjct: 36 PEGRRPQGGNQ-----PQRPPPP---PGKPQGPPPQGGNQSQGPPPPPGKPEGRPPQGGN 87
Query: 120 -RRGGPCLPGARRRLFSLSVSRSSGPPRARSCAPHPAREGMATTRGPEAGLRVSGRGARA 178
+G P PG R ++S G P P +G + P R
Sbjct: 88 QSQGPPPHPGKPERPPPQGGNQSQGTPPPPGKPERPPPQGGNQSHRPPPPPGKPERPPPQ 147
Query: 179 GSSTAPTRAQASPARPGFPPCLRSPPCPASSRAFRSCLSRAKAWDTAGQTAGQPSEKWEE 238
G + ++Q P PG P PP P RS S G+ G P +E
Sbjct: 148 GGN----QSQGPPPHPGKP---EGPP-PQEGNKSRSARS------PPGKPQGPPQ---QE 190
Query: 239 GRK 241
G K
Sbjct: 191 GNK 193
Score = 30.8 bits (68), Expect = 1.4
Identities = 24/80 (30%), Positives = 30/80 (37%), Gaps = 11/80 (13%)
Query: 42 PPP--------ARLPRNGRRGP-LWKGRGPAGRAPAASAETALPRPREPPEPGAGPSPKR 92
PPP AR P +GP +G P G P + P P +P A P+ K
Sbjct: 165 PPPQEGNKSRSARSPPGKPQGPPQQEGNKPQGPPPPGKPQGPPPAGGNPQQPQAPPAGKP 224
Query: 93 SPPPRAPRASSLAAPEPQVG 112
PP P+ P P G
Sbjct: 225 QGPPPPPQGG--RPPRPAQG 242
>gi|117306167 proline-rich protein BstNI subfamily 3 precursor [Homo
sapiens]
Length = 309
Score = 50.1 bits (118), Expect = 2e-06
Identities = 60/231 (25%), Positives = 81/231 (35%), Gaps = 45/231 (19%)
Query: 40 PRPPPARLPRNGRR--GPLWKGRGPAGRAPAASAETALPRPR------EPPEPG---AGP 88
P P R P+ G + GP + P G P ++ P PR +PP+ G GP
Sbjct: 54 PGKPEGRPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPRPGKPEGQPPQGGNQSQGP 113
Query: 89 SPK----RSPPPRA--------PRASSLAAPEPQVGDWTSREGRRGGPCLPGARRRLFSL 136
P+ PPP+ PR P PQ G+ + +G P PG
Sbjct: 114 PPRPGKPEGPPPQGGNQSQGPPPRPGKPEGPPPQGGNQS-----QGPPPRPGKPEGPPPQ 168
Query: 137 SVSRSSGPPRARSCAPHPAREGMATTRGPEAGLRVSGRGARAGSSTAP-----TRAQASP 191
++S GPP PHP G P+ G + G R G P ++Q P
Sbjct: 169 GGNQSQGPP------PHP---GKPEGPPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPP 219
Query: 192 ARPGFPPCLRSPPCPASSRAFRSCLSRAKAWDTAGQTAGQPSEKWEEGRKQ 242
RPG P PP ++ K Q +P GR Q
Sbjct: 220 PRPGKP---EGPPSQGGNKPQGPPPHPGKPQGPPPQEGNKPQRPPPPGRPQ 267
Score = 39.7 bits (91), Expect = 0.003
Identities = 40/144 (27%), Positives = 53/144 (36%), Gaps = 25/144 (17%)
Query: 62 PAGRAP-AASAETALPRPREPPE--PGAGPSPKRSPPPRAPRASSLAAPEPQVGDWTSRE 118
P GR P + P P PE P G + + PPPR + P PQ G+ +
Sbjct: 36 PEGRRPQGGNQPQRTPPPPGKPEGRPPQGGNQSQGPPPRPGKPE---GPPPQGGNQS--- 89
Query: 119 GRRGGPCLPGARRRLFSLSVSRSSGPPRARSCAPHPAREGMATTRGPEAGLRVSGRGARA 178
+G P PG ++S GP P R G P+ G + G R
Sbjct: 90 --QGPPPRPGKPEGQPPQGGNQSQGP---------PPRPGKPEGPPPQGGNQSQGPPPRP 138
Query: 179 GSSTAP-----TRAQASPARPGFP 197
G P ++Q P RPG P
Sbjct: 139 GKPEGPPPQGGNQSQGPPPRPGKP 162
Score = 30.4 bits (67), Expect = 1.8
Identities = 22/69 (31%), Positives = 26/69 (37%), Gaps = 9/69 (13%)
Query: 42 PPPARLPRNGRRGPLWKGRGPAGRAPAASAETALPRPREPPEPGAGPSPKRSPPPRAPRA 101
PPP P P G P G P +P+ PP P G P+R PPP P+
Sbjct: 218 PPPR--PGKPEGPPSQGGNKPQGPPPHPG------KPQGPP-PQEGNKPQRPPPPGRPQG 268
Query: 102 SSLAAPEPQ 110
PQ
Sbjct: 269 PPPPGGNPQ 277
Score = 30.4 bits (67), Expect = 1.8
Identities = 19/63 (30%), Positives = 28/63 (44%), Gaps = 6/63 (9%)
Query: 42 PPPARLPRNGRRGPLWKGRGPAGRAPAASAETALP----RPREPPEPGAGPSPKRSPPPR 97
PPP + R P + +GP P + + LP +P+ PP P G P R P +
Sbjct: 249 PPPQEGNKPQRPPPPGRPQGPP--PPGGNPQQPLPPPAGKPQGPPPPPQGGRPHRPPQGQ 306
Query: 98 APR 100
P+
Sbjct: 307 PPQ 309
>gi|237757312 synaptojanin 1 isoform c [Homo sapiens]
Length = 1295
Score = 49.7 bits (117), Expect = 3e-06
Identities = 60/201 (29%), Positives = 79/201 (39%), Gaps = 41/201 (20%)
Query: 28 IAGGAVVDVEVRPRPPPARLPRNGRRGPLWKGRGPAGRAPAASAETALP----RPREPPE 83
I+ G V + +RP P+R P GP P PA P P+ PP
Sbjct: 1056 ISEGPVPSLPIRPSRAPSRTP-----GPPSAQSSPIDAQPATPLPQKDPAQPLEPKRPPP 1110
Query: 84 PGAGPSPKR-SPPPRAPRASSLAAPEPQVGDWTSREGRRGGPCLPGARRRLFSLSVSRSS 142
P P R +PP R P S +P P T +E G P PG R+ ++ RS
Sbjct: 1111 PRPVAPPTRPAPPQRPPPPSGARSPAP-----TRKE--FGAPKSPGTTRK---DNIGRSQ 1160
Query: 143 GPPRARSCAPHPAREGMATTR---GPEAGL---RVSGRGARAGSSTAPTRAQAS------ 190
P+A P PA G +T R P AG+ S A AG T ++++ S
Sbjct: 1161 PSPQAGLAGPGPA--GYSTARPTIPPRAGVISAPQSHARASAGRLTPESQSKTSETSKGS 1218
Query: 191 -----PARP--GFPPCLRSPP 204
P +P FPP PP
Sbjct: 1219 TFLPEPLKPQAAFPPQSSLPP 1239
Score = 30.4 bits (67), Expect = 1.8
Identities = 23/74 (31%), Positives = 30/74 (40%), Gaps = 11/74 (14%)
Query: 40 PRPPPARLPRNGRRGPLWKGRGPAGRAPAASAETALPRPREPPEPGAGPSPKRSPPPRAP 99
P P A P P PA R A P P+ P+P P+ PPPR+
Sbjct: 1224 PLKPQAAFPPQSSLPP------PAQRLQEPLVPVAAPMPQSGPQPNLETPPQ--PPPRSR 1275
Query: 100 RASSL---AAPEPQ 110
+ SL A+ +PQ
Sbjct: 1276 SSHSLPSEASSQPQ 1289
>gi|239754657 PREDICTED: hypothetical protein XP_002346062 [Homo
sapiens]
Length = 384
Score = 49.7 bits (117), Expect = 3e-06
Identities = 59/206 (28%), Positives = 79/206 (38%), Gaps = 31/206 (15%)
Query: 13 RVARAGRARLYKALPIAGGAVVDVEVRPRPPPARLPRNGRRGPLWKGRGPAGRAPAASAE 72
R+ R+ ++RL + + + EV P P R R P + R P GR+ + +
Sbjct: 45 RLTRSRKSRLERGT-FSPESAAGTEVSGAPHPDSRTRPAARPPHPRTRSPPGRSGSGTTF 103
Query: 73 TALP------------RPREP-PEPGAGPSPKRSPPPRAPRASSLAAPEPQVGDWTSREG 119
+A+P RP P P PG S + SP P AP+A++ AP +
Sbjct: 104 SAVPPRPSQHQSGSRLRPAAPGPRPGCS-SARASPAPAAPQAAARTAPGRAASGGSGPGS 162
Query: 120 RRGGPCLPGARRRLFSLSVSRSSGPP---RARSCAPHPAREGMATTRG--PEAGLRVSGR 174
R G GAR SR+ G P R C P R R P SG
Sbjct: 163 RGQGSDQVGAR-------PSRAGGQPPPLTCRRCRAAPRRSARPFRRPGLPLKSRPGSGT 215
Query: 175 GARA----GSSTAPTRAQASPARPGF 196
GAR+ GS P A AS F
Sbjct: 216 GARSCGTWGSGGGPGTAAASSPSADF 241
Score = 36.6 bits (83), Expect = 0.025
Identities = 45/163 (27%), Positives = 61/163 (37%), Gaps = 25/163 (15%)
Query: 60 RGPAGRAPAASAETA-LPRPREPPEPGAGPS-PK-RSPPPRAPRASSLAAPEPQVGDWTS 116
RG AA E + P P P A P P+ RSPP R+ ++ +A P+ S
Sbjct: 56 RGTFSPESAAGTEVSGAPHPDSRTRPAARPPHPRTRSPPGRSGSGTTFSAVPPRPSQHQS 115
Query: 117 REGRRGGPCLPGARRRLFSLSVSRSSGPPRARSCAPHPAREGMATTRGPEAGLRVSGRGA 176
G R P PG R S +R+S P A P+A R + A
Sbjct: 116 --GSRLRPAAPGPRP---GCSSARASPAPAA-----------------PQAAARTAPGRA 153
Query: 177 RAGSSTAPTRAQASPARPGFPPCLRSPPCPASSRAFRSCLSRA 219
+G S +R Q S P P P + R R+ R+
Sbjct: 154 ASGGSGPGSRGQGSDQVGARPSRAGGQPPPLTCRRCRAAPRRS 196
>gi|239743279 PREDICTED: hypothetical protein XP_002342816 [Homo
sapiens]
Length = 384
Score = 49.7 bits (117), Expect = 3e-06
Identities = 59/206 (28%), Positives = 79/206 (38%), Gaps = 31/206 (15%)
Query: 13 RVARAGRARLYKALPIAGGAVVDVEVRPRPPPARLPRNGRRGPLWKGRGPAGRAPAASAE 72
R+ R+ ++RL + + + EV P P R R P + R P GR+ + +
Sbjct: 45 RLTRSRKSRLERGT-FSPESAAGTEVSGAPHPDSRTRPAARPPHPRTRSPPGRSGSGTTF 103
Query: 73 TALP------------RPREP-PEPGAGPSPKRSPPPRAPRASSLAAPEPQVGDWTSREG 119
+A+P RP P P PG S + SP P AP+A++ AP +
Sbjct: 104 SAVPPRPSQHQSGSRLRPAAPGPRPGCS-SARASPAPAAPQAAARTAPGRAASGGSGPGS 162
Query: 120 RRGGPCLPGARRRLFSLSVSRSSGPP---RARSCAPHPAREGMATTRG--PEAGLRVSGR 174
R G GAR SR+ G P R C P R R P SG
Sbjct: 163 RGQGSDQVGAR-------PSRAGGQPPPLTCRRCRAAPRRSARPFRRPGLPLKSRPGSGT 215
Query: 175 GARA----GSSTAPTRAQASPARPGF 196
GAR+ GS P A AS F
Sbjct: 216 GARSCGTWGSGGGPGTAAASSPSADF 241
Score = 36.6 bits (83), Expect = 0.025
Identities = 45/163 (27%), Positives = 61/163 (37%), Gaps = 25/163 (15%)
Query: 60 RGPAGRAPAASAETA-LPRPREPPEPGAGPS-PK-RSPPPRAPRASSLAAPEPQVGDWTS 116
RG AA E + P P P A P P+ RSPP R+ ++ +A P+ S
Sbjct: 56 RGTFSPESAAGTEVSGAPHPDSRTRPAARPPHPRTRSPPGRSGSGTTFSAVPPRPSQHQS 115
Query: 117 REGRRGGPCLPGARRRLFSLSVSRSSGPPRARSCAPHPAREGMATTRGPEAGLRVSGRGA 176
G R P PG R S +R+S P A P+A R + A
Sbjct: 116 --GSRLRPAAPGPRP---GCSSARASPAPAA-----------------PQAAARTAPGRA 153
Query: 177 RAGSSTAPTRAQASPARPGFPPCLRSPPCPASSRAFRSCLSRA 219
+G S +R Q S P P P + R R+ R+
Sbjct: 154 ASGGSGPGSRGQGSDQVGARPSRAGGQPPPLTCRRCRAAPRRS 196
>gi|239508962 PREDICTED: hypothetical protein [Homo sapiens]
Length = 384
Score = 49.7 bits (117), Expect = 3e-06
Identities = 59/206 (28%), Positives = 79/206 (38%), Gaps = 31/206 (15%)
Query: 13 RVARAGRARLYKALPIAGGAVVDVEVRPRPPPARLPRNGRRGPLWKGRGPAGRAPAASAE 72
R+ R+ ++RL + + + EV P P R R P + R P GR+ + +
Sbjct: 45 RLTRSRKSRLERGT-FSPESAAGTEVSGAPHPDSRTRPAARPPHPRTRSPPGRSGSGTTF 103
Query: 73 TALP------------RPREP-PEPGAGPSPKRSPPPRAPRASSLAAPEPQVGDWTSREG 119
+A+P RP P P PG S + SP P AP+A++ AP +
Sbjct: 104 SAVPPRPSQHQSGSRLRPAAPGPRPGCS-SARASPAPAAPQAAARTAPGRAASGGSGPGS 162
Query: 120 RRGGPCLPGARRRLFSLSVSRSSGPP---RARSCAPHPAREGMATTRG--PEAGLRVSGR 174
R G GAR SR+ G P R C P R R P SG
Sbjct: 163 RGQGSDQVGAR-------PSRAGGQPPPLTCRRCRAAPRRSARPFRRPGLPLKSRPGSGT 215
Query: 175 GARA----GSSTAPTRAQASPARPGF 196
GAR+ GS P A AS F
Sbjct: 216 GARSCGTWGSGGGPGTAAASSPSADF 241
Score = 36.6 bits (83), Expect = 0.025
Identities = 45/163 (27%), Positives = 61/163 (37%), Gaps = 25/163 (15%)
Query: 60 RGPAGRAPAASAETA-LPRPREPPEPGAGPS-PK-RSPPPRAPRASSLAAPEPQVGDWTS 116
RG AA E + P P P A P P+ RSPP R+ ++ +A P+ S
Sbjct: 56 RGTFSPESAAGTEVSGAPHPDSRTRPAARPPHPRTRSPPGRSGSGTTFSAVPPRPSQHQS 115
Query: 117 REGRRGGPCLPGARRRLFSLSVSRSSGPPRARSCAPHPAREGMATTRGPEAGLRVSGRGA 176
G R P PG R S +R+S P A P+A R + A
Sbjct: 116 --GSRLRPAAPGPRP---GCSSARASPAPAA-----------------PQAAARTAPGRA 153
Query: 177 RAGSSTAPTRAQASPARPGFPPCLRSPPCPASSRAFRSCLSRA 219
+G S +R Q S P P P + R R+ R+
Sbjct: 154 ASGGSGPGSRGQGSDQVGARPSRAGGQPPPLTCRRCRAAPRRS 196
>gi|171906567 peripheral benzodiazepine receptor-associated protein 1
isoform b [Homo sapiens]
Length = 1797
Score = 49.7 bits (117), Expect = 3e-06
Identities = 60/217 (27%), Positives = 77/217 (35%), Gaps = 49/217 (22%)
Query: 81 PPEPGAGPSPKRSPPPRAPRASSLAAPEPQVGDW----------TSREGRRGGPCLPGAR 130
PPEP S PR P L+ + GD +SR G P P +R
Sbjct: 1299 PPEPALLGLGCDSGQPRRPGQCPLSPESSRAGDCLEDMPGLVGGSSRRRGGGSPEKPPSR 1358
Query: 131 RRL-----FSLSVSRSSGPPRARSCAPHPAREGMATTRGPEAGLRVSGRGARAGSSTAPT 185
RR + ++GP + P R G+ GP GL SGRG R G S +
Sbjct: 1359 RRPPDPREHCSRLLSNNGPQASGRLGPTRERGGLPVIEGPRTGLEASGRG-RLGPSRRCS 1417
Query: 186 RAQASPARPGFPPCLRSPPCPASSRAF----------------RSCL-SRAKAWDTA--G 226
R +A PG CL SP C S + SC +AW TA G
Sbjct: 1418 RGRA--LEPGLASCL-SPKCLEISIEYDSEDEQEAGSGGISITSSCYPGDGEAWGTATVG 1474
Query: 227 QTAGQPSEK-----------WEEGRKQWRKEGLLGRS 252
+ G P WE+G + R GR+
Sbjct: 1475 RPRGPPKANSGPKPYPRLPAWEKGEPERRGRSATGRA 1511
Score = 30.0 bits (66), Expect = 2.3
Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 13/67 (19%)
Query: 77 RPREPPEPGAGPSP-------KRSPPPRAPRASSLAAPEP-----QVGDWTSREGR-RGG 123
RPR PP+ +GP P ++ P R R+++ A EP + G+ ++G R G
Sbjct: 1475 RPRGPPKANSGPKPYPRLPAWEKGEPERRGRSATGRAKEPLSRATETGEARGQDGSGRRG 1534
Query: 124 PCLPGAR 130
P G R
Sbjct: 1535 PQKRGVR 1541
Score = 28.1 bits (61), Expect = 8.8
Identities = 43/159 (27%), Positives = 53/159 (33%), Gaps = 31/159 (19%)
Query: 66 APAASAETALPRPREP-------PEPGAGPSPKRSPPPRAPRASSLAAPEPQVGDWTSRE 118
+P + ++P P P P + PSP SP RAP AS A+P P
Sbjct: 1001 SPHGESADSIPAPITPALAPASLPARVSCPSPHPSPEARAPLAS--ASPGP--------- 1049
Query: 119 GRRGGPCLPGARRRLFSLSVSRSSGPPRA---RSCAPHPAREGMATTRGPEAGLRVSGRG 175
G P P + L G P A R A + A EAG V G
Sbjct: 1050 ---GDPSSP--LQHPAPLGTQEPPGAPPASPSREMAKGSHEDPPAPCSQEEAGAAVLGTS 1104
Query: 176 -ARAGSSTAPTRAQASPARPGF----PPCLRSPPCPASS 209
R S++ PA P CPASS
Sbjct: 1105 EERTASTSTLGEKDPGPAAPSLAKQEAEWTAGEACPASS 1143
>gi|171906559 peripheral benzodiazepine receptor-associated protein 1
isoform a [Homo sapiens]
Length = 1857
Score = 49.7 bits (117), Expect = 3e-06
Identities = 60/217 (27%), Positives = 77/217 (35%), Gaps = 49/217 (22%)
Query: 81 PPEPGAGPSPKRSPPPRAPRASSLAAPEPQVGDW----------TSREGRRGGPCLPGAR 130
PPEP S PR P L+ + GD +SR G P P +R
Sbjct: 1359 PPEPALLGLGCDSGQPRRPGQCPLSPESSRAGDCLEDMPGLVGGSSRRRGGGSPEKPPSR 1418
Query: 131 RRL-----FSLSVSRSSGPPRARSCAPHPAREGMATTRGPEAGLRVSGRGARAGSSTAPT 185
RR + ++GP + P R G+ GP GL SGRG R G S +
Sbjct: 1419 RRPPDPREHCSRLLSNNGPQASGRLGPTRERGGLPVIEGPRTGLEASGRG-RLGPSRRCS 1477
Query: 186 RAQASPARPGFPPCLRSPPCPASSRAF----------------RSCL-SRAKAWDTA--G 226
R +A PG CL SP C S + SC +AW TA G
Sbjct: 1478 RGRA--LEPGLASCL-SPKCLEISIEYDSEDEQEAGSGGISITSSCYPGDGEAWGTATVG 1534
Query: 227 QTAGQPSEK-----------WEEGRKQWRKEGLLGRS 252
+ G P WE+G + R GR+
Sbjct: 1535 RPRGPPKANSGPKPYPRLPAWEKGEPERRGRSATGRA 1571
Score = 30.0 bits (66), Expect = 2.3
Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 13/67 (19%)
Query: 77 RPREPPEPGAGPSP-------KRSPPPRAPRASSLAAPEP-----QVGDWTSREGR-RGG 123
RPR PP+ +GP P ++ P R R+++ A EP + G+ ++G R G
Sbjct: 1535 RPRGPPKANSGPKPYPRLPAWEKGEPERRGRSATGRAKEPLSRATETGEARGQDGSGRRG 1594
Query: 124 PCLPGAR 130
P G R
Sbjct: 1595 PQKRGVR 1601
Score = 28.1 bits (61), Expect = 8.8
Identities = 43/159 (27%), Positives = 53/159 (33%), Gaps = 31/159 (19%)
Query: 66 APAASAETALPRPREP-------PEPGAGPSPKRSPPPRAPRASSLAAPEPQVGDWTSRE 118
+P + ++P P P P + PSP SP RAP AS A+P P
Sbjct: 1061 SPHGESADSIPAPITPALAPASLPARVSCPSPHPSPEARAPLAS--ASPGP--------- 1109
Query: 119 GRRGGPCLPGARRRLFSLSVSRSSGPPRA---RSCAPHPAREGMATTRGPEAGLRVSGRG 175
G P P + L G P A R A + A EAG V G
Sbjct: 1110 ---GDPSSP--LQHPAPLGTQEPPGAPPASPSREMAKGSHEDPPAPCSQEEAGAAVLGTS 1164
Query: 176 -ARAGSSTAPTRAQASPARPGF----PPCLRSPPCPASS 209
R S++ PA P CPASS
Sbjct: 1165 EERTASTSTLGEKDPGPAAPSLAKQEAEWTAGEACPASS 1203
>gi|170650694 centaurin, gamma 1 isoform PIKE-L [Homo sapiens]
Length = 1192
Score = 49.3 bits (116), Expect = 4e-06
Identities = 57/198 (28%), Positives = 76/198 (38%), Gaps = 28/198 (14%)
Query: 27 PIAGGAVVDVEVRPRPPPARLPRNGRR----GPLWKGRGPAGRAPAASAETALPRPREPP 82
P++GG + P P P P + RR P W G P GRA ++ P
Sbjct: 122 PLSGG------LSPDPKPGGAPTSSRRPLLSSPSWGGPEPEGRAGGGIPGSS------SP 169
Query: 83 EPGAGPSP-KRSPPPRAPR-ASSLAAPEPQVGDWTSREGRRGGPCLPGARRRLFSLSVSR 140
PG G K +PPP AP+ ++ + G R P G R S S
Sbjct: 170 HPGTGSRRLKVAPPPPAPKPCKTVTTSGAKAGGGKGAGSRLSWPESEGKPRVKGSKS--- 226
Query: 141 SSGPPRARSCAPHPAREG-----MATTRGPEAGLRVSGR-GARAGSSTAPTRAQASPARP 194
S+G + S A A G +T+ G AG G+ R G S + P P
Sbjct: 227 SAGTGASVSAAATAAAAGGGGSTASTSGGVGAGAGARGKLSPRKGKSKTLDNSDLHPGPP 286
Query: 195 -GFPPCLRSPPCPASSRA 211
G PP L PP P+ + A
Sbjct: 287 AGSPPPLTLPPTPSPATA 304
Score = 37.0 bits (84), Expect = 0.019
Identities = 54/201 (26%), Positives = 70/201 (34%), Gaps = 45/201 (22%)
Query: 52 RRGPLWKGRGPAGR----------APAASAETALPRPRE-------PPEP----GAGPSP 90
R+ LW AG APA+ A P P PP P G P P
Sbjct: 72 RQDALWISTSSAGTGGAEPPALSPAPASPARPVSPAPGRRLSLWAVPPGPPLSGGLSPDP 131
Query: 91 KRSPPPRAPRASSLAAPEPQVGDW--TSREGRRGGPCLPGARRRLFSLSVSRSSGPPRAR 148
K P + R L++P W EGR GG +PG S S +G R +
Sbjct: 132 KPGGAPTSSRRPLLSSP-----SWGGPEPEGRAGGG-IPG------SSSPHPGTGSRRLK 179
Query: 149 SCAPHPAREGMATTRGPEAGLRVSGRGARAGSSTAPTRAQASPARPGFPPCLRSPPCPAS 208
P PA P+ V+ GA+AG + P G P ++ A
Sbjct: 180 VAPPPPA---------PKPCKTVTTSGAKAGGGKGAGSRLSWPESEG-KPRVKGSKSSAG 229
Query: 209 SRAFRSCLSRAKAWDTAGQTA 229
+ A S + A A G TA
Sbjct: 230 TGASVSAAATAAAAGGGGSTA 250
>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
sapiens]
Length = 816
Score = 49.3 bits (116), Expect = 4e-06
Identities = 47/162 (29%), Positives = 64/162 (39%), Gaps = 23/162 (14%)
Query: 63 AGRAPAASAETALPRPREPPEPGAGPSPKRSPPPRAPRASSLAAPEPQVGDWTSREGRR- 121
A R+ AA E LPRP PS + PP PR S +A E + + RR
Sbjct: 168 ARRSRAAGTEVGLPRP--------APSARPRPPTEGPRKSVSSASEHSTTEPSPAARRRP 219
Query: 122 --GGPCLPGARRRLFSLSVSRSS---------GPPRARSCAPHPAREGMATTRGPEAGLR 170
GG A R L S + SS G PRA + P +G+ R P+
Sbjct: 220 SAGGGLQRPASRSLSSSATPLSSPARSGPSARGTPRAPAHPSQPKPKGLQALRPPQVTPP 279
Query: 171 VSGRGARAG---SSTAPTRAQASPARPGFPPCLRSPPCPASS 209
G SS T + ++P P PP L++ P P ++
Sbjct: 280 RKDAAPALGPLSSSPLATPSPSAPPSPSAPPSLQTLPSPPAT 321
Score = 43.9 bits (102), Expect = 2e-04
Identities = 57/187 (30%), Positives = 70/187 (37%), Gaps = 47/187 (25%)
Query: 61 GPAGRAPAASAETALPRPREPPEPGAGPSPKRSPPPRAPRASSLAAPEPQVG--DWTSRE 118
G A R PAA A L PR P P R PPP P A + VG R
Sbjct: 11 GAAARTPAARAPGLLT-PRPPGSP-------RPPPPVTPAALRVLGAAGAVGRKPLAERA 62
Query: 119 GRRGGPCLPGARRRLFSLSVSR--SSG----PPRARSCAP----HPAREGMATTRGP--E 166
G GG +P + R SR +SG P A++ +P P R T GP +
Sbjct: 63 GGIGGATIPESAPRAGPTRTSRPPASGRGERAPPAKNTSPGPVSSPGRASGTTRPGPLGQ 122
Query: 167 AGLRVSGRGARAGSSTAPTRAQASPARPGFPPCLRSPPCPASSRAFRSCLSRAKAWDTAG 226
GLR+S A + A +A +P R S LS DT+G
Sbjct: 123 KGLRIS-----AEETVARGKATEAPKR--------------------SALSAGARRDTSG 157
Query: 227 QTAGQPS 233
T G PS
Sbjct: 158 PTPGTPS 164
Score = 42.4 bits (98), Expect = 5e-04
Identities = 54/172 (31%), Positives = 69/172 (40%), Gaps = 30/172 (17%)
Query: 60 RGPAGRAPAASAETALPRPREPPEPGAGPSPKRSPPPRAPRASSLAAPEPQVG--DWTSR 117
R PA RAP L PR P P R PPP P A + VG R
Sbjct: 15 RTPAARAP------GLLTPRPPGSP-------RPPPPVTPAALRVLGAAGAVGRKPLAER 61
Query: 118 EGRRGGPCLPGARRRLFSLSVSR--SSG----PPRARSCAP----HPAREGMATTRGP-- 165
G GG +P + R SR +SG P A++ +P P R T GP
Sbjct: 62 AGGIGGATIPESAPRAGPTRTSRPPASGRGERAPPAKNTSPGPVSSPGRASGTTRPGPLG 121
Query: 166 EAGLRVSGRG--ARAGSSTAPTR-AQASPARPGFPPCLRSPPCPASSRAFRS 214
+ GLR+S AR ++ AP R A ++ AR P PA +R R+
Sbjct: 122 QKGLRISAEETVARGKATEAPKRSALSAGARRDTSGPTPGTPSPAMARRSRA 173
Score = 41.2 bits (95), Expect = 0.001
Identities = 49/195 (25%), Positives = 70/195 (35%), Gaps = 31/195 (15%)
Query: 39 RPRPPPARLPRNGRRGPLWKGRGPAGRAPAASAETALPRPREPPEPGAG------PSPKR 92
+P+P + R + P K PA P +S+ A P P PP P A PSP
Sbjct: 262 QPKPKGLQALRPPQVTPPRKDAAPA-LGPLSSSPLATPSPSAPPSPSAPPSLQTLPSPPA 320
Query: 93 SPPPRA------------------PRASSLAAPEPQVGDWTSREGRRGGPCLPGARRRLF 134
+PP +A P S LA P PQ + + P P +
Sbjct: 321 TPPSQATTSLGSPTLQATHSFLPSPPLSPLATPPPQAPPALALPPLQAPPSPPASP---- 376
Query: 135 SLSVSRSSGPPRARSCAPHPAREGMATTRGPEAGLRVSGRGARAGSSTAPTRAQASPARP 194
LS + P + A H + + P S + S +A +QA P+
Sbjct: 377 PLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSATPPSQAPPSLA 436
Query: 195 GFPPCLRSPPCPASS 209
P L+ PP P +S
Sbjct: 437 A--PPLQVPPSPPAS 449
Score = 38.9 bits (89), Expect = 0.005
Identities = 51/200 (25%), Positives = 68/200 (34%), Gaps = 18/200 (9%)
Query: 43 PPARLPRNGRRGPLWKGRGPAGRAPAASAETALPRPREPPEPGAGPSPKRSPPPRAPRAS 102
PP++ P + PL P P + + T P P+ PP A P PPP+AP A
Sbjct: 427 PPSQAPPSLAAPPLQVPPSPPASPPMSPSAT--PPPQAPPPLAAPPLQLAKPPPQAPPA- 483
Query: 103 SLAAPEPQVGDWTSREGRRGGPCLPGARRRLFSLSVSRSSGPPRARS------CAPHPAR 156
LA P Q P P A + L+ PP + +P +
Sbjct: 484 -LATPPLQALPSPPASFPGQAPFSPSASLPMSPLATPPPQAPPVLAAPLLQVPPSPPASP 542
Query: 157 EGMATTRGPEAGLRVSGRGARAGSSTAPTRAQASPARPGFPP--CLRSPPCPASSRAFRS 214
A R P G S G R + AP P P P L P S + S
Sbjct: 543 TLQAPRRPPTPGPDTSVSGPRLTLALAP----GPPPPPSRSPSSTLSGPDLAGHSSSATS 598
Query: 215 CLSRAKAWDTA--GQTAGQP 232
+ +D+ G A P
Sbjct: 599 TPEELRGYDSGPEGGAAASP 618
Score = 36.2 bits (82), Expect = 0.032
Identities = 26/76 (34%), Positives = 33/76 (43%), Gaps = 5/76 (6%)
Query: 40 PRPPPARLPRNGRRGP-LWKGRGPAGRAPAASAETALPRPREPP-EPGAGPS---PKRSP 94
P PP + P + P + P +AP + A L P PP P PS P ++P
Sbjct: 404 PPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAP 463
Query: 95 PPRAPRASSLAAPEPQ 110
PP A LA P PQ
Sbjct: 464 PPLAAPPLQLAKPPPQ 479
Score = 35.4 bits (80), Expect = 0.055
Identities = 60/229 (26%), Positives = 78/229 (34%), Gaps = 36/229 (15%)
Query: 40 PRPPPARLPRNGRRGPLWKGRGPAGRAPAASAETALPRPREPPEPGAGPSPKRSPPPRAP 99
P PPP+R P + GP G +S+ T+ P + G SPPP A
Sbjct: 572 PPPPPSRSPSSTLSGPDLAGH--------SSSATSTPEELRGYDSGPEGGAAASPPPDAE 623
Query: 100 RASSLAA-----PEPQVGDWTSREGRRGGPCL------PGARRRLFSLSVSRSSGPPRAR 148
A+ A P P + + G G P PG+ L ++ + GP
Sbjct: 624 LAACHPAAWSRGPAPPL----AFRGAPGAPLPWPPATGPGSADGL--CTIYETEGP---E 674
Query: 149 SCAPHPAREGMATTRGPEAGLRVSGRGARAGSSTAPTRAQASPARPGFPPCLRSPPCPAS 208
S P P A GP G SG A AG+ + AR G P L +
Sbjct: 675 SATPAPG----ALDPGPSPG--TSGGKAAAGAGAGASSRSPKQARLGELP-LGALQASVV 727
Query: 209 SRAFRSCLSRAKAWDTAGQTAGQPSEKWEEGRKQWRKEGLLGRSALGSW 257
L A A AG + G P E G L + LG W
Sbjct: 728 QHLLSRTLLLAAAEGAAGGSGGGPGGA-EGGGVTGGARAALSDAELGRW 775
Score = 33.9 bits (76), Expect = 0.16
Identities = 38/143 (26%), Positives = 50/143 (34%), Gaps = 11/143 (7%)
Query: 74 ALPRPREPPEPGAGPSPKRSPPPRAPRASSLAAPEPQVGDWTS---REGRRGGPCLPGAR 130
A P P+ PP P PP +P S LA P PQ + + + P P +
Sbjct: 351 ATPPPQAPPALALPPLQAPPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQ 410
Query: 131 RRL---FSLSVSRSSGPPRARSCAPHPAREGMATTRGPEAGLRVSGRGARAGSSTAPTRA 187
S VS S+ PP P A + P A +S + P A
Sbjct: 411 APFSPPASPPVSPSATPP--SQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAA 468
Query: 188 ---QASPARPGFPPCLRSPPCPA 207
Q + P PP L +PP A
Sbjct: 469 PPLQLAKPPPQAPPALATPPLQA 491
Score = 31.2 bits (69), Expect = 1.0
Identities = 36/151 (23%), Positives = 54/151 (35%), Gaps = 30/151 (19%)
Query: 66 APAAS---AETALPRPREPPEPGAGPSPKRSPPPRAPRASSLAAPEPQVGDWTSREGRRG 122
+P AS + +A P + PP A P PP +P S A P PQ
Sbjct: 414 SPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQ------------ 461
Query: 123 GPCLPGARRRLFSLSVSRSSGPPRARSCAPHPAREGMATTRGPEAGLRVSGRGARAGSST 182
A L + + + PP+A P + + P G+ + S++
Sbjct: 462 ------APPPLAAPPLQLAKPPPQAPPALATPPLQAL-----PSPPASFPGQAPFSPSAS 510
Query: 183 APTRAQASPARPGFP----PCLRSPPCPASS 209
P A+P P P L+ PP P +S
Sbjct: 511 LPMSPLATPPPQAPPVLAAPLLQVPPSPPAS 541
>gi|163914392 glioma tumor suppressor candidate region gene 1 [Homo
sapiens]
Length = 1560
Score = 49.3 bits (116), Expect = 4e-06
Identities = 52/176 (29%), Positives = 63/176 (35%), Gaps = 24/176 (13%)
Query: 42 PPPARLPRNGRRGPLWKGRGPAGRAPAASAETALPRPREP---PEPGAGPSPKRSPPPRA 98
PPPA+ P P+ KG G +AP + A A P P+ P P G GPS S P +A
Sbjct: 727 PPPAQDPAPAT--PVAKGAGLGPQAPDSQASPA-PAPQIPAAAPLKGPGPSSSPSLPHQA 783
Query: 99 PRASSLAAPEPQVGDWTSREGRRGGPCLPGARRRLFSLSVSRSSGPPRARSCAPHPAREG 158
P S P P P P +R SVSR P C P A
Sbjct: 784 PLGDSPHLPSPH-------------PTRPPSRPPSRPQSVSRPPSEPPLHPCPPPQAPPT 830
Query: 159 MATTRGPEAGLRVSGRGAR-----AGSSTAPTRAQASPARPGFPPCLRSPPCPASS 209
+ + L V + G P R Q+ P PP PP SS
Sbjct: 831 LPGIFVIQNQLGVPPPASNPAPTAPGPPQPPLRPQSQPPEGPLPPAPHLPPSSTSS 886
Score = 48.1 bits (113), Expect = 8e-06
Identities = 64/215 (29%), Positives = 80/215 (37%), Gaps = 33/215 (15%)
Query: 40 PRPPPARLPRNGRRGPLWKGRGPAGRAP--------AASAETALPRPREPPE-------P 84
P PP R GPL PA P A+S+ET+ P P P
Sbjct: 857 PPQPPLRPQSQPPEGPL----PPAPHLPPSSTSSAVASSSETSSRLPAPTPSDFQLQFPP 912
Query: 85 GAGPSPKRSPPPRAPRASSLAAPEPQVGDWTSREGRRGGPCLPGARRRLFSLSVSRSSGP 144
GP +PPP AAP P T + P LP + L SG
Sbjct: 913 SQGPHKSPTPPPTLHLVPEPAAPPPPPPR-TFQMVTTPFPALPQPKALLERFH-QVPSGI 970
Query: 145 PRARSCAPHPAREGMATTRGP----EAGLRVSGRGARAGSSTAPTRAQASP--ARPGFPP 198
PA +T+ GP A + VSG+ A +G+ TAP+ A A A G PP
Sbjct: 971 ILQNKAGGAPAAPQTSTSLGPLTSPAASVLVSGQ-APSGTPTAPSHAPAPAPMAATGLPP 1029
Query: 199 CLRSPPCPASSRAFRSCLSRAKAWDTAGQTAGQPS 233
L PA ++AF S L A G+PS
Sbjct: 1030 LL-----PAENKAFASNLPTLNVAKAASSGPGKPS 1059
Score = 32.3 bits (72), Expect = 0.47
Identities = 32/101 (31%), Positives = 40/101 (39%), Gaps = 15/101 (14%)
Query: 67 PAASAETALPRPREPPEP---GAGPSPKRSPPPRAPRASSL-AAPE-PQVGDWTSREGRR 121
P A+ + A P PR PP P G PPP AP L AP P++ +
Sbjct: 1336 PPATLKVAEPPPRPPPPPPPTGQMNGTVDHPPPAAPERKPLGTAPHCPRLPLRKTYRENV 1395
Query: 122 GGPCLPGARRRLFSLSVSRSSGPPRARSCAPHPAREGMATT 162
GGP P +G R S AP PA+ AT+
Sbjct: 1396 GGPGAP----------EGTPAGRARGGSPAPLPAKVDEATS 1426
Score = 30.0 bits (66), Expect = 2.3
Identities = 51/192 (26%), Positives = 66/192 (34%), Gaps = 29/192 (15%)
Query: 42 PPPARLPRNGRRGPLWKGRGPAGRAPAASAETALPRPREPPE-----PGAGPSPKRSPPP 96
PP A N G + A AA T P P+ PP P P+ PP
Sbjct: 589 PPSAVAMLNTPDGLVQPATPAAATGEAAPVLTVQPAPQAPPAVSTPLPLGLQQPQAQQPP 648
Query: 97 RAPRASSLA-----APEPQVGDWTSREGRRGG---PCLPGARRRLFSLSV----SRSSGP 144
+AP + A P+P G +S E G P A SL + RS P
Sbjct: 649 QAPTPQAAAPPQATTPQPSPGLASSPEKIVLGQPPSATPTAILTQDSLQMFLPQERSQQP 708
Query: 145 PRARS-----------CAPHPARE-GMATTRGPEAGLRVSGRGARAGSSTAPTRAQASPA 192
A AP PA++ AT AGL ++A + AP A+P
Sbjct: 709 LSAEGPHLSVPASVIVSAPPPAQDPAPATPVAKGAGLGPQAPDSQASPAPAPQIPAAAPL 768
Query: 193 RPGFPPCLRSPP 204
+ P S P
Sbjct: 769 KGPGPSSSPSLP 780
>gi|120587019 zinc finger protein 318 [Homo sapiens]
Length = 2279
Score = 49.3 bits (116), Expect = 4e-06
Identities = 42/126 (33%), Positives = 50/126 (39%), Gaps = 16/126 (12%)
Query: 76 PRPREPPEPGAGPSPKRSPPPRAPRASSLAAPEPQVGDWTSREGRRGGPCLPGARRRLFS 135
PR +GP+ + SPPP P SS P + + GRR P P RR
Sbjct: 23 PRSGRSSGSSSGPARRSSPPP-PPSGSSSRTPARRPRSPSGHRGRRASPSPPRGRR---- 77
Query: 136 LSVSRSSGPPRARSCAPHPAREGMATTRGPEAGLRVSGRG------ARAGSSTAPTRAQA 189
S PPRAR +P P R GP AG R S RG AR G P + +
Sbjct: 78 ----VSPSPPRARRGSPSPPRGRRLFPPGP-AGFRGSSRGESRADYARDGRGDHPGDSGS 132
Query: 190 SPARPG 195
PG
Sbjct: 133 RRRSPG 138
Score = 35.8 bits (81), Expect = 0.042
Identities = 40/137 (29%), Positives = 50/137 (36%), Gaps = 17/137 (12%)
Query: 39 RPRPPPARLPRNGRRGPLWKGRGPAGRA---PAASAETALPRPREPPEPGAGPSPKRSPP 95
RP+ PR+GR GPA R+ P S ++ R P P + SP
Sbjct: 14 RPKDDGGGGPRSGRSSG--SSSGPARRSSPPPPPSGSSSRTPARRPRSPSGHRGRRASPS 71
Query: 96 PRAPRASSLAAPEPQVGDWTSREGRRGGPCLPGARRRLFSLSVSRSSGPPRARSCAPHPA 155
P R S + P RRG P P RRLF + G R S A + A
Sbjct: 72 PPRGRRVSPSPP----------RARRGSPS-PPRGRRLFPPGPAGFRGSSRGESRADY-A 119
Query: 156 REGMATTRGPEAGLRVS 172
R+G G R S
Sbjct: 120 RDGRGDHPGDSGSRRRS 136
Score = 30.0 bits (66), Expect = 2.3
Identities = 36/109 (33%), Positives = 41/109 (37%), Gaps = 13/109 (11%)
Query: 137 SVSRSSGPPRARSCAPHPAREGMAT-TRGPEAGLRVSGRGARAGSSTAPTRAQASP---- 191
S SSGP R S P P+ T R P + SG R S + P + SP
Sbjct: 28 SSGSSSGPARRSSPPPPPSGSSSRTPARRPRSP---SGHRGRRASPSPPRGRRVSPSPPR 84
Query: 192 ARPGFPPCLRS----PPCPASSRAFRSCLSRAK-AWDTAGQTAGQPSEK 235
AR G P R PP PA R SRA A D G G +
Sbjct: 85 ARRGSPSPPRGRRLFPPGPAGFRGSSRGESRADYARDGRGDHPGDSGSR 133
Score = 28.1 bits (61), Expect = 8.8
Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
Query: 67 PAASAETALPRPREPPEPGAGPSPKRSPP--PRAPRASSLAAP 107
P+ E LP P PP P P P P P A +A+++ AP
Sbjct: 1433 PSHLPEQILPPPPPPPPPPPPPPPVIPHPAAPSAAQANAILAP 1475
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 48.9 bits (115), Expect = 5e-06
Identities = 53/201 (26%), Positives = 69/201 (34%), Gaps = 17/201 (8%)
Query: 24 KALPIAGGAVVDVEVRPRP-PPARLPRNGRRGPL-----WKGRGPAGRAPAASAETALPR 77
+A P G + P PPA P + + GP W PA P+ A P
Sbjct: 922 RATPAPKGIPASPSPKGAPTPPAATPPSPKGGPATPSPKWAPTPPAATPPSPKGGPATPS 981
Query: 78 PREPPEPGAG--PSPKRSPPPRAPRASSLAAPEPQVGDWTSREGRRGGPCLPGARRRLFS 135
P+ P P A PSPK P +P+ AP P S +G P +
Sbjct: 982 PKGAPTPPAATPPSPKGGPATPSPK----GAPTPPAVTPPSPKGSPAATPFPKGASTPPA 1037
Query: 136 LSVSRSSGPPRARSCAPHPAREGMATTRGPEAG-LRVSGRGARAGSSTAPTRAQASPARP 194
+ G P A AT P+ G S +GA + P + PA P
Sbjct: 1038 ATPPSPKGSPAATPLPKGAPTTPAATLPSPKGGPATPSLKGAPTPPAATPPSPKGGPATP 1097
Query: 195 ---GFP-PCLRSPPCPASSRA 211
G P P +PP P A
Sbjct: 1098 SPKGAPMPPAATPPSPKGGLA 1118
Score = 43.5 bits (101), Expect = 2e-04
Identities = 52/207 (25%), Positives = 77/207 (37%), Gaps = 27/207 (13%)
Query: 27 PIAGGAVVDVEVRPRPPPARLPRNGRRGPLWKGRGPAGRAPAASAETALPRPREPPEPGA 86
P G A ++ P PP A P + + GP A PAA+ + PP GA
Sbjct: 1067 PKGGPATPSLKGAPTPPAAT-PPSPKGGPATPSPKGAPMPPAATPPSPKGGLATPPHKGA 1125
Query: 87 GPSPKRSPP-PR----------APRASSLAAPEPQVGDWTSREGRRGGPCLPGAR--RRL 133
+P +PP P+ AP + P P+ G + +G P P A
Sbjct: 1126 PTTPAATPPSPKGGLATPPPKGAPTTPAATPPSPKGG--LATPPPKGAPTTPAATPPSPK 1183
Query: 134 FSLSVSRSSGPPRARSCAPHPAREGMAT--TRGPEAGLRVSGRGARAGSST-----APTR 186
L+ G P + P + G+AT +G + + G +T APT
Sbjct: 1184 GGLATPSPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGLATPSPKGAPTT 1243
Query: 187 AQASP----ARPGFPPCLRSPPCPASS 209
A+P P PP +P PA++
Sbjct: 1244 PAATPPSPKGGPATPPPKGAPTPPAAT 1270
Score = 42.4 bits (98), Expect = 5e-04
Identities = 44/160 (27%), Positives = 54/160 (33%), Gaps = 43/160 (26%)
Query: 63 AGRAPAASAETALPRPREPPEPGAG--PSPKRSP----PPRAPRASSLAAPEPQVGDWTS 116
A PA A P P+ P P A PSPK P P AP + P P
Sbjct: 921 ARATPAPKGIPASPSPKGAPTPPAATPPSPKGGPATPSPKWAPTPPAATPPSP------- 973
Query: 117 REGRRGGPCLPGARRRLFSLSVSRSSGPPRARSCAPHPAREGMATTRGPEAGLRVSGRGA 176
+GGP P + G P + P + G AT S +GA
Sbjct: 974 ----KGGPATPSPK------------GAPTPPAATPPSPKGGPATP---------SPKGA 1008
Query: 177 RAGSSTAPTRAQASPARPGFP-----PCLRSPPCPASSRA 211
+ P + SPA FP P +PP P S A
Sbjct: 1009 PTPPAVTPPSPKGSPAATPFPKGASTPPAATPPSPKGSPA 1048
Score = 41.6 bits (96), Expect = 8e-04
Identities = 57/204 (27%), Positives = 72/204 (35%), Gaps = 40/204 (19%)
Query: 43 PPARLPRNGRRGPLWKGRG--PAGRAPAASAETALPRPR--------EPPEPGAGPS--- 89
PP+ P+ G P KG PA P+ A P P+ PP P GP+
Sbjct: 1202 PPS--PKGGLATPSPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGPATPP 1259
Query: 90 PKRSPPPRAPRASSL----------AAPEPQVGDWTSREG------RRGGPCLPGARRRL 133
PK +P P A SL AP P V S +G +G P P A
Sbjct: 1260 PKGAPTPPAATPPSLKGGLATPPHKGAPNPAVVTPPSPKGGPATSPPKGAPTPPAATPP- 1318
Query: 134 FSLSVSRSSGPPRARSCAP---HPAREGMATTRGPEAGLRVSGRGARAGSSTAPTRAQAS 190
S S + PP+ P P+ +G T P G S PT A+
Sbjct: 1319 -SPKGSPGTPPPKGAPTPPAVTPPSPKGTPTL--PATTPSSKGGPTTPSSKEGPTPPAAT 1375
Query: 191 PARPGFPPCLRSPPCPASSRAFRS 214
P+ G P +PP P A S
Sbjct: 1376 PSHKGGP--AMTPPSPKRGPAIPS 1397
Score = 40.0 bits (92), Expect = 0.002
Identities = 61/235 (25%), Positives = 83/235 (35%), Gaps = 59/235 (25%)
Query: 27 PIAGGAVVDVEVRPRPPPARLP--RNGRRGPLWKGR---------GPAGRAPAASAETAL 75
P G A + P PP A P + G P KG P G PA S
Sbjct: 1251 PKGGPATPPPKGAPTPPAATPPSLKGGLATPPHKGAPNPAVVTPPSPKG-GPATSPPKGA 1309
Query: 76 PRPREPPEPGAGPSPKRSPPPRAPRASSLAAPEPQVGDWT---SREGRRGGPCLPGARRR 132
P P P SP PP AP ++ P P+ G T + +GGP P ++
Sbjct: 1310 PTPPAATPPSPKGSPGTPPPKGAPTPPAVTPPSPK-GTPTLPATTPSSKGGPTTPSSKEG 1368
Query: 133 LF--SLSVSRSSGP------PRARSCAPHP----------------------AREGMAT- 161
+ + S GP P+ P P REG AT
Sbjct: 1369 PTPPAATPSHKGGPAMTPPSPKRGPAIPSPKGDPTSPAVIPLSPKKAPATPVTREGAATP 1428
Query: 162 TRG---PEAGLRVSGRGARAGSSTAPTRAQASPARPG-------FPPCLRSPPCP 206
++G P A VS + +A +++AP A+P+ G PP + PP P
Sbjct: 1429 SKGDLTPPAVTPVSLK--KAPATSAPKGGPATPSSKGDPTLPAVTPPSPKEPPAP 1481
Score = 32.3 bits (72), Expect = 0.47
Identities = 43/176 (24%), Positives = 61/176 (34%), Gaps = 10/176 (5%)
Query: 40 PRPPPARLPRNGRRGPLWKGRGPAGRAPAASAETALPRPREPPEPGAGPSPKRSP-PPRA 98
P+ PPA P + PA AP + P P E A PS +R P P A
Sbjct: 1475 PKEPPAPKQVATSSSPK---KAPATPAPMGAPTLPAVIPSSPKEVPATPSSRRDPIAPTA 1531
Query: 99 PRAS-----SLAAPEPQVGDWTSREGRRGGPCLPGARRRLFSLSVSRSSGPPRARSCAPH 153
S +LA E + + + P +P + + S +S PP A + + +
Sbjct: 1532 TLLSKKTPATLAPKEALIPPAMTVPSPKKTPAIPTPKEAPATPSSKEASSPP-AVTPSTY 1590
Query: 154 PAREGMATTRGPEAGLRVSGRGARAGSSTAPTRAQASPARPGFPPCLRSPPCPASS 209
P A S + A + P + PA P SPP SS
Sbjct: 1591 KGAPSPKELLIPPAVTSPSPKEAPTPPAVTPPSPEKGPATPAPKGTPTSPPVTPSS 1646
Score = 28.1 bits (61), Expect = 8.8
Identities = 40/177 (22%), Positives = 58/177 (32%), Gaps = 40/177 (22%)
Query: 43 PPARLPRNGRRGPLWKGRGPAGRAPAASAETALPRPREPPEPGAGPSPKRSPPPRAPRAS 102
PPA P + ++ P P++ + LP P SPK P P+ S
Sbjct: 1435 PPAVTPVSLKKAPATSAPKGGPATPSSKGDPTLPAVTPP-------SPKEPPAPKQVATS 1487
Query: 103 SLAAPEPQVGDWTSREGRRGGPCLPGARRRLFSLSVSRSSGPPRARSCAPHPAREGMATT 162
S P + G P LP +V SS P+ P R+ +A T
Sbjct: 1488 SSPKKAP------ATPAPMGAPTLP---------AVIPSS--PKEVPATPSSRRDPIAPT 1530
Query: 163 RGPEAGLRVSGRGARAGSSTAPTRAQASPA--------RPGFPPCLRSPPCPASSRA 211
+ + ++ AP A PA P P +P P+S A
Sbjct: 1531 --------ATLLSKKTPATLAPKEALIPPAMTVPSPKKTPAIPTPKEAPATPSSKEA 1579
>gi|239748756 PREDICTED: hypothetical protein XP_002346788 [Homo
sapiens]
Length = 647
Score = 48.5 bits (114), Expect = 6e-06
Identities = 74/254 (29%), Positives = 97/254 (38%), Gaps = 48/254 (18%)
Query: 5 RGSGAAWRRVARAGRARLYKALPIAGGAVVDVEVRP--------------RPPPARLPRN 50
RG+G A A GR R A P++G +RP RP A LPR+
Sbjct: 231 RGAGRAGAGAAACGR-RGRIAAPLSGVVQKASYLRPKNLPRLLSMPSAAARPCGAALPRS 289
Query: 51 GRRGPLWKGRGPAGRAPAASAETALPRPREPPEPGAGPSPKRSPPPRAPRASSLAAPEPQ 110
G + GR P GR AA+ R P G R P+ +LAA
Sbjct: 290 G-----FSGR-PRGRGGAAAG-----RGSRGEHPACGVGLARGTAPQPASTWALAARPRA 338
Query: 111 VGDWTSREGRRGGPCLPGARRRLFSLSVSRSSGPPRARSCAPHPAREGMATTRGPEAGL- 169
G WTSR + G +RR + + +S P AR +P P R+ R P A L
Sbjct: 339 GGTWTSRFEAQRGCAHQDGQRRTRDGAGNHASEP--ARVWSPPPRRQ--RPRRLPRASLQ 394
Query: 170 ----------RVSGRG-ARAGSST----APTRAQASPA--RPGFPPCLRSPPCPASSRAF 212
R SG G AR G + APT A P R P R+P +S +
Sbjct: 395 EEPKRRPPCARPSGAGPAREGPAAWPGGAPTPPHARPTGRRQDPEPGPRAPRGGPASSGW 454
Query: 213 RSCLSRAKAWDTAG 226
+ + + WD G
Sbjct: 455 HAGSAAGRGWDPGG 468
Score = 37.7 bits (86), Expect = 0.011
Identities = 64/230 (27%), Positives = 84/230 (36%), Gaps = 25/230 (10%)
Query: 51 GRRGPLWKGRGPAGRAPAASAETALPRPREPPEPGAGPSPKRSPPPRAPRASSLAAPEPQ 110
GRR +G+G GR A A+T GP+ P P A RA L EP
Sbjct: 140 GRRSCGREGQGRGGRRRRA-ADTLFQ---------LGPAWPALPAPAAGRA--LGTDEPL 187
Query: 111 VGDWTSREGRRGGPCLPGARRRLFSLSVSRSSGPPRARSCAPHPAREGMATTRG---PEA 167
G C P ARR + + PRA S A A +A RG A
Sbjct: 188 A---------LRGQCGPAARRGCAQEQLRNAPWAPRAHSPAGRLALGLIAPRRGAGRAGA 238
Query: 168 GLRVSGRGARAGSSTAPTRAQASPARPGFPPCLRSPPCPASSRAFRSCLSRAKAWDTAGQ 227
G GR R + + +AS RP P L S P A++R + L R+
Sbjct: 239 GAAACGRRGRIAAPLSGVVQKASYLRPKNLPRLLSMP-SAAARPCGAALPRSGFSGRPRG 297
Query: 228 TAGQPSEKWEEGRKQWRKEGLLGRSALGSWTRWVLLRGLRSGLGETARPE 277
G + + G GL +A + W L R+G T+R E
Sbjct: 298 RGGAAAGRGSRGEHPACGVGLARGTAPQPASTWALAARPRAGGTWTSRFE 347
>gi|239742799 PREDICTED: hypothetical protein XP_002342652 [Homo
sapiens]
Length = 647
Score = 48.5 bits (114), Expect = 6e-06
Identities = 74/254 (29%), Positives = 97/254 (38%), Gaps = 48/254 (18%)
Query: 5 RGSGAAWRRVARAGRARLYKALPIAGGAVVDVEVRP--------------RPPPARLPRN 50
RG+G A A GR R A P++G +RP RP A LPR+
Sbjct: 231 RGAGRAGAGAAACGR-RGRIAAPLSGVVQKASYLRPKNLPRLLSMPSAAARPCGAALPRS 289
Query: 51 GRRGPLWKGRGPAGRAPAASAETALPRPREPPEPGAGPSPKRSPPPRAPRASSLAAPEPQ 110
G + GR P GR AA+ R P G R P+ +LAA
Sbjct: 290 G-----FSGR-PRGRGGAAAG-----RGSRGEHPACGVGLARGTAPQPASTWALAARPRA 338
Query: 111 VGDWTSREGRRGGPCLPGARRRLFSLSVSRSSGPPRARSCAPHPAREGMATTRGPEAGL- 169
G WTSR + G +RR + + +S P AR +P P R+ R P A L
Sbjct: 339 GGTWTSRFEAQRGCAHQDGQRRTRDGAGNHASEP--ARVWSPPPRRQ--RPRRLPRASLQ 394
Query: 170 ----------RVSGRG-ARAGSST----APTRAQASPA--RPGFPPCLRSPPCPASSRAF 212
R SG G AR G + APT A P R P R+P +S +
Sbjct: 395 EEPKRRPPCARPSGAGPAREGPAAWPGGAPTPPHARPTGRRQDPEPGPRAPRGGPASSGW 454
Query: 213 RSCLSRAKAWDTAG 226
+ + + WD G
Sbjct: 455 HAGSAAGRGWDPGG 468
Score = 37.7 bits (86), Expect = 0.011
Identities = 64/230 (27%), Positives = 84/230 (36%), Gaps = 25/230 (10%)
Query: 51 GRRGPLWKGRGPAGRAPAASAETALPRPREPPEPGAGPSPKRSPPPRAPRASSLAAPEPQ 110
GRR +G+G GR A A+T GP+ P P A RA L EP
Sbjct: 140 GRRSCGREGQGRGGRRRRA-ADTLFQ---------LGPAWPALPAPAAGRA--LGTDEPL 187
Query: 111 VGDWTSREGRRGGPCLPGARRRLFSLSVSRSSGPPRARSCAPHPAREGMATTRG---PEA 167
G C P ARR + + PRA S A A +A RG A
Sbjct: 188 A---------LRGQCGPAARRGCAQEQLRNAPWAPRAHSPAGRLALGLIAPRRGAGRAGA 238
Query: 168 GLRVSGRGARAGSSTAPTRAQASPARPGFPPCLRSPPCPASSRAFRSCLSRAKAWDTAGQ 227
G GR R + + +AS RP P L S P A++R + L R+
Sbjct: 239 GAAACGRRGRIAAPLSGVVQKASYLRPKNLPRLLSMP-SAAARPCGAALPRSGFSGRPRG 297
Query: 228 TAGQPSEKWEEGRKQWRKEGLLGRSALGSWTRWVLLRGLRSGLGETARPE 277
G + + G GL +A + W L R+G T+R E
Sbjct: 298 RGGAAAGRGSRGEHPACGVGLARGTAPQPASTWALAARPRAGGTWTSRFE 347
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.133 0.428
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,930,404
Number of Sequences: 37866
Number of extensions: 1147157
Number of successful extensions: 19763
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 482
Number of HSP's successfully gapped in prelim test: 1825
Number of HSP's that attempted gapping in prelim test: 10252
Number of HSP's gapped (non-prelim): 7664
length of query: 278
length of database: 18,247,518
effective HSP length: 101
effective length of query: 177
effective length of database: 14,423,052
effective search space: 2552880204
effective search space used: 2552880204
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.