Guide to the Human Genome
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Name: BZRAP1 Sequence: fasta or formatted (1857aa) NCBI GI: 171906559
Description:

peripheral benzodiazepine receptor-associated protein 1 isoform a

Referenced in:

Mitochondria
Non-Receptor Tyrosine Kinase Pathways

Other entries for this name:
alt prot [1797aa] peripheral benzodiazepine receptor-associated protein 1 isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.9        166           2
 C cysteine            2.2         41           3
 D aspartate           4.0         74           3
 E glutamate          10.8        201          13
 F phenylalanine       1.6         30           2
 G glycine             9.2        170           4
 H histidine           1.4         26           1
 I isoleucine          2.1         39           2
 K lysine              3.1         58           2
 L leucine            10.0        186           2
 M methionine          1.0         18           1
 N asparagine          2.1         39           2
 P proline            10.7        199           4
 Q glutamine           5.5        103           2
 R arginine            7.9        147           4
 S serine              9.0        168           3
 T threonine           3.8         70           2
 V valine              4.5         83           3
 W tryptophan          0.9         16           1
 Y tyrosine            1.2         23           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   peripheral benzodiazepine receptor-associated prote... 
BZRAP1                0.956   peripheral benzodiazepine receptor-associated prote...
RIMBP2                0.107   RIM-binding protein 2 
RIMBP3B               0.092   RIMS binding protein 3B 
RIMBP3C               0.092   RIMS binding protein 3C 
RIMBP3                0.092   DKFZP434H0735 protein 
GOLGA2                0.015   Golgi autoantigen, golgin subfamily a, 2 
TCHH                  0.015   trichohyalin 
CROCC                 0.015   ciliary rootlet coiled-coil 
PLEC1                 0.013   plectin 1 isoform 11 
PLEC1                 0.013   plectin 1 isoform 10 
PLEC1                 0.013   plectin 1 isoform 8 
PLEC1                 0.013   plectin 1 isoform 7 
PLEC1                 0.013   plectin 1 isoform 6 
PLEC1                 0.013   plectin 1 isoform 3 
PLEC1                 0.013   plectin 1 isoform 2 
PLEC1                 0.013   plectin 1 isoform 1 
MYH9                  0.013   myosin, heavy polypeptide 9, non-muscle 
GOLGA3                0.013   Golgi autoantigen, golgin subfamily a, 3 
DSP                   0.013   desmoplakin isoform I 
LOC645202             0.012   PREDICTED: hypothetical protein LOC645202 
CCDC64B               0.012   coiled-coil domain containing 64B 
PELP1                 0.012   proline, glutamic acid and leucine rich protein 1 [...
MYH14                 0.012   myosin, heavy chain 14 isoform 1 
MYH14                 0.012   myosin, heavy chain 14 isoform 2 
MYH14                 0.012   myosin, heavy chain 14 isoform 3 
ZNF853                0.012   zinc finger protein 853 
HOOK2                 0.012   hook homolog 2 isoform 2 
CEP250                0.012   centrosomal protein 2 
MYH7B                 0.012   myosin, heavy polypeptide 7B, cardiac muscle, beta ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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