Guide to the Human Genome
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Name: C10orf95 Sequence: fasta or formatted (257aa) NCBI GI: 13376335
Description:

hypothetical protein LOC79946

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            18.7         48           3
 C cysteine            7.8         20           2
 D aspartate           0.8          2           1
 E glutamate           1.6          4           2
 F phenylalanine       0.0          0           0
 G glycine            10.9         28           2
 H histidine           0.8          2           1
 I isoleucine          0.0          0           0
 K lysine              2.3          6           1
 L leucine             1.9          5           1
 M methionine          1.2          3           1
 N asparagine          1.6          4           1
 P proline            15.2         39           3
 Q glutamine           0.8          2           1
 R arginine           16.7         43           4
 S serine             11.3         29           2
 T threonine           6.2         16           2
 V valine              0.0          0           0
 W tryptophan          1.6          4           1
 Y tyrosine            0.8          2           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hypothetical protein LOC79946 
LOC100132234          0.058   PREDICTED: hypothetical protein LOC100132234 
LOC100132234          0.057   PREDICTED: hypothetical protein LOC100132234 
LOC100132234          0.057   PREDICTED: hypothetical protein LOC100132234 
LOC100290265          0.055   PREDICTED: hypothetical protein XP_002346787 
LOC100290367          0.055   PREDICTED: hypothetical protein XP_002347417 
LOC100288730          0.055   PREDICTED: hypothetical protein XP_002343287 
LOC100292058          0.049   PREDICTED: hypothetical protein XP_002344766 
LOC100130360          0.049   PREDICTED: hypothetical protein 
FLJ22184              0.045   PREDICTED: hypothetical protein FLJ22184 
FLJ22184              0.045   PREDICTED: hypothetical protein FLJ22184 
FLJ22184              0.045   PREDICTED: hypothetical protein LOC80164 
FLJ37078              0.045   hypothetical protein LOC222183 
HCN2                  0.045   hyperpolarization activated cyclic nucleotide-gated...
LOC100129129          0.045   PREDICTED: hypothetical protein 
LOC731282             0.043   PREDICTED: hypothetical protein 
LOC100291634          0.043   PREDICTED: hypothetical protein XP_002346062 
LOC100287232          0.043   PREDICTED: hypothetical protein XP_002342816 
LOC731282             0.043   PREDICTED: hypothetical protein 
LOC100287232          0.043   PREDICTED: hypothetical protein 
LOC729991-MEF2B       0.042   myocyte enhancer factor 2B isoform b 
LOC100290372          0.042   PREDICTED: hypothetical protein XP_002346788 
KRTAP4-9              0.042   PREDICTED: keratin associated protein 4-9 
LOC100288606          0.042   PREDICTED: hypothetical protein XP_002342652 
LOC645321             0.042   PREDICTED: hypothetical protein 
LOC645321             0.042   PREDICTED: hypothetical protein 
LOC100292541          0.040   PREDICTED: hypothetical protein 
LOC100293375          0.040   PREDICTED: hypothetical protein 
SRRM1                 0.040   serine/arginine repetitive matrix 1 
KRTAP4-6              0.040   PREDICTED: keratin associated protein 4.6 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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