Guide to the Human Genome
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Name: BZRAP1 Sequence: fasta or formatted (1797aa) NCBI GI: 171906567
Description:

peripheral benzodiazepine receptor-associated protein 1 isoform b

Referenced in:

Mitochondria
Non-Receptor Tyrosine Kinase Pathways

Other entries for this name:
alt prot [1857aa] peripheral benzodiazepine receptor-associated protein 1 isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.7        156           2
 C cysteine            2.2         39           3
 D aspartate           4.0         72           3
 E glutamate          11.0        197          13
 F phenylalanine       1.7         30           2
 G glycine             9.3        168           4
 H histidine           1.4         26           1
 I isoleucine          2.1         38           2
 K lysine              3.0         54           2
 L leucine             9.7        175           2
 M methionine          1.0         18           1
 N asparagine          2.2         39           2
 P proline            10.9        196           4
 Q glutamine           5.5         99           2
 R arginine            7.7        139           4
 S serine              9.1        164           3
 T threonine           3.7         67           2
 V valine              4.5         81           3
 W tryptophan          0.9         16           1
 Y tyrosine            1.3         23           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   peripheral benzodiazepine receptor-associated prote... 
BZRAP1                0.988   peripheral benzodiazepine receptor-associated prote...
RIMBP2                0.111   RIM-binding protein 2 
RIMBP3B               0.068   RIMS binding protein 3B 
RIMBP3C               0.067   RIMS binding protein 3C 
RIMBP3                0.067   DKFZP434H0735 protein 
GOLGA2                0.015   Golgi autoantigen, golgin subfamily a, 2 
TCHH                  0.015   trichohyalin 
LOC645202             0.013   PREDICTED: hypothetical protein LOC645202 
AZI1                  0.013   5-azacytidine induced 1 isoform b 
NUMA1                 0.013   nuclear mitotic apparatus protein 1 
CCDC64B               0.013   coiled-coil domain containing 64B 
CROCC                 0.012   ciliary rootlet coiled-coil 
PELP1                 0.012   proline, glutamic acid and leucine rich protein 1 [...
ZNF853                0.012   zinc finger protein 853 
CEP164                0.012   centrosomal protein 164kDa 
MYH11                 0.012   smooth muscle myosin heavy chain 11 isoform SM1A [Ho...
MYH11                 0.012   smooth muscle myosin heavy chain 11 isoform SM1B [Ho...
MYH11                 0.012   smooth muscle myosin heavy chain 11 isoform SM2B [Ho...
MYH11                 0.012   smooth muscle myosin heavy chain 11 isoform SM2A [Ho...
LOC727832             0.012   golgi autoantigen, golgin subfamily a-like 
LOC100133758          0.012   PREDICTED: hypothetical protein, partial 
AZI1                  0.012   5-azacytidine induced 1 isoform a 
CEP250                0.012   centrosomal protein 2 
PPL                   0.012   periplakin 
CEP290                0.012   centrosomal protein 290kDa 
PLEC1                 0.012   plectin 1 isoform 11 
PLEC1                 0.012   plectin 1 isoform 10 
PLEC1                 0.012   plectin 1 isoform 8 
PLEC1                 0.012   plectin 1 isoform 7 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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