Search of human proteins with 116812612

Search of human proteins with 116812612

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|116812612 LY6/PLAUR domain containing 1 isoform a [Homo
sapiens]
         (141 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|116812612 LY6/PLAUR domain containing 1 isoform a [Homo sapiens]   297   2e-81
gi|116812604 LY6/PLAUR domain containing 1 isoform b [Homo sapiens]   186   6e-48
gi|5031995 prostate stem cell antigen preproprotein [Homo sapiens]     44   6e-05
gi|45387925 LY6/PLAUR domain containing 2 [Homo sapiens]               38   0.002
gi|53829381 plasminogen activator, urokinase receptor isoform 3 ...    38   0.003
gi|4505865 plasminogen activator, urokinase receptor isoform 1 p...    38   0.003
gi|34996523 LY6/PLAUR domain containing 6 [Homo sapiens]               37   0.005
gi|13994360 keratin associated protein 1.5 [Homo sapiens]              34   0.046
gi|112420992 crumbs homolog 2 [Homo sapiens]                           33   0.060
gi|239756699 PREDICTED: hypothetical protein [Homo sapiens]            32   0.13 
gi|239745682 PREDICTED: hypothetical protein XP_002343543 [Homo ...    32   0.13 
gi|55770876 notch4 preproprotein [Homo sapiens]                        32   0.13 
gi|4504033 glycosylphosphatidylinositol anchored molecule like p...    32   0.13 
gi|13569940 keratin associated protein 1-3 [Homo sapiens]              32   0.17 
gi|28626521 zinc finger, NFX1-type containing 1 [Homo sapiens]         32   0.17 
gi|9506545 delta-like 4 protein precursor [Homo sapiens]               32   0.23 
gi|41327708 crumbs homolog 1 precursor [Homo sapiens]                  32   0.23 
gi|40255210 LY6/PLAUR domain containing 6B [Homo sapiens]              32   0.23 
gi|13569942 keratin associated protein 1-1 [Homo sapiens]              32   0.23 
gi|148833508 notch1 preproprotein [Homo sapiens]                       30   0.50 
gi|134244285 Notch homolog 3 [Homo sapiens]                            30   0.66 
gi|38490568 keratin associated protein 10-4 [Homo sapiens]             30   0.66 
gi|154759251 keratin associated protein 10-9 [Homo sapiens]            30   0.66 
gi|38490571 keratin associated protein 10-7 [Homo sapiens]             30   0.66 
gi|45593147 EGF-like-domain, multiple 9 [Homo sapiens]                 30   0.86 
gi|45545431 EGF-like-domain, multiple 9 [Homo sapiens]                 30   0.86 
gi|4557679 jagged 1 precursor [Homo sapiens]                           29   1.1  
gi|10864065 neuroglobin [Homo sapiens]                                 29   1.1  
gi|111074524 Src homology 2 domain containing F [Homo sapiens]         29   1.1  
gi|62243658 PI-3-kinase-related kinase SMG-1 [Homo sapiens]            28   1.9  

>gi|116812612 LY6/PLAUR domain containing 1 isoform a [Homo sapiens]
          Length = 141

 Score =  297 bits (760), Expect = 2e-81
 Identities = 141/141 (100%), Positives = 141/141 (100%)

Query: 1   MWVLGIAATFCGLFLLPGFALQIQCYQCEEFQLNNDCSSPEFIVNCTVNVQDMCQKEVME 60
           MWVLGIAATFCGLFLLPGFALQIQCYQCEEFQLNNDCSSPEFIVNCTVNVQDMCQKEVME
Sbjct: 1   MWVLGIAATFCGLFLLPGFALQIQCYQCEEFQLNNDCSSPEFIVNCTVNVQDMCQKEVME 60

Query: 61  QSAGIMYRKSCASSAACLIASAGYQSFCSPGKLNSVCISCCNTPLCNGPRPKKRGSSASA 120
           QSAGIMYRKSCASSAACLIASAGYQSFCSPGKLNSVCISCCNTPLCNGPRPKKRGSSASA
Sbjct: 61  QSAGIMYRKSCASSAACLIASAGYQSFCSPGKLNSVCISCCNTPLCNGPRPKKRGSSASA 120

Query: 121 LRPGLRTTILFLKLALFSAHC 141
           LRPGLRTTILFLKLALFSAHC
Sbjct: 121 LRPGLRTTILFLKLALFSAHC 141


>gi|116812604 LY6/PLAUR domain containing 1 isoform b [Homo sapiens]
          Length = 89

 Score =  186 bits (472), Expect = 6e-48
 Identities = 89/89 (100%), Positives = 89/89 (100%)

Query: 53  MCQKEVMEQSAGIMYRKSCASSAACLIASAGYQSFCSPGKLNSVCISCCNTPLCNGPRPK 112
           MCQKEVMEQSAGIMYRKSCASSAACLIASAGYQSFCSPGKLNSVCISCCNTPLCNGPRPK
Sbjct: 1   MCQKEVMEQSAGIMYRKSCASSAACLIASAGYQSFCSPGKLNSVCISCCNTPLCNGPRPK 60

Query: 113 KRGSSASALRPGLRTTILFLKLALFSAHC 141
           KRGSSASALRPGLRTTILFLKLALFSAHC
Sbjct: 61  KRGSSASALRPGLRTTILFLKLALFSAHC 89


>gi|5031995 prostate stem cell antigen preproprotein [Homo sapiens]
          Length = 123

 Score = 43.5 bits (101), Expect = 6e-05
 Identities = 43/131 (32%), Positives = 56/131 (42%), Gaps = 21/131 (16%)

Query: 6   IAATFCGLFLLPGFALQIQCYQCEEFQLNNDCSSPEFIVNCTVNVQDMCQKEVMEQSAGI 65
           +A    GL L PG AL   CY C+    N DC   E   NCT  + + C    + ++ G+
Sbjct: 6   LALLMAGLALQPGTALL--CYSCKAQVSNEDCLQVE---NCT-QLGEQCWTARI-RAVGL 58

Query: 66  MYRKSCASSAACLIASAGYQSFCSPGKLNSVCISCCNTPLCNGPRPKKRGSSASALRPGL 125
           +   S   S  C+  S  Y      GK N   I+CC+T LCN        S A AL+P  
Sbjct: 59  LTVISKGCSLNCVDDSQDYYV----GKKN---ITCCDTDLCN-------ASGAHALQPAA 104

Query: 126 RTTILFLKLAL 136
               L   L L
Sbjct: 105 AILALLPALGL 115


>gi|45387925 LY6/PLAUR domain containing 2 [Homo sapiens]
          Length = 125

 Score = 38.1 bits (87), Expect = 0.002
 Identities = 28/109 (25%), Positives = 46/109 (42%), Gaps = 20/109 (18%)

Query: 3   VLGIAATFCGLFLLPGFALQIQCYQCEEFQLNNDCSSPEFIVNCTVNVQDMCQKEVMEQS 62
           +L +    CG       A  ++CY C E    +DC +   I  CT N + MC+  +  + 
Sbjct: 8   LLALVLAACG-----ELAPALRCYVCPEPTGVSDCVT---IATCTTN-ETMCKTTLYSRE 58

Query: 63  AGIMYRKSCASSAACLIASAGYQSFCSPGKLNSVC----ISCCNTPLCN 107
               ++     + +C        S C P  ++ +     +SCCNT LCN
Sbjct: 59  IVYPFQGDSTVTKSCA-------SKCKPSDVDGIGQTLPVSCCNTELCN 100


>gi|53829381 plasminogen activator, urokinase receptor isoform 3
           precursor [Homo sapiens]
          Length = 290

 Score = 37.7 bits (86), Expect = 0.003
 Identities = 29/116 (25%), Positives = 46/116 (39%), Gaps = 9/116 (7%)

Query: 24  QCYQCEEFQLNNDCSSPEFIVNCTVNVQDMCQKEVMEQSAGIMYR-KSCASSAACLIASA 82
           QCY C+    +   S   F+++C   +          +     Y  + CA+++ C  A  
Sbjct: 170 QCYSCKGNSTHGCSSEETFLIDCRGPMNQCLVATGTHEPKNQSYMVRGCATASMCQHAHL 229

Query: 83  GYQSFCSPGKLNSVCISCCNTPLCNGPRPKKRGSSASALRPG---LRTTILFLKLA 135
           G         +N + +SCC    CN P    +  S +A +PG   L  TI  L  A
Sbjct: 230 G-----DAFSMNHIDVSCCTKSGCNHPDLDVQYRSGAAPQPGPAHLSLTITLLMTA 280


>gi|4505865 plasminogen activator, urokinase receptor isoform 1
           precursor [Homo sapiens]
          Length = 335

 Score = 37.7 bits (86), Expect = 0.003
 Identities = 29/116 (25%), Positives = 46/116 (39%), Gaps = 9/116 (7%)

Query: 24  QCYQCEEFQLNNDCSSPEFIVNCTVNVQDMCQKEVMEQSAGIMYR-KSCASSAACLIASA 82
           QCY C+    +   S   F+++C   +          +     Y  + CA+++ C  A  
Sbjct: 215 QCYSCKGNSTHGCSSEETFLIDCRGPMNQCLVATGTHEPKNQSYMVRGCATASMCQHAHL 274

Query: 83  GYQSFCSPGKLNSVCISCCNTPLCNGPRPKKRGSSASALRPG---LRTTILFLKLA 135
           G         +N + +SCC    CN P    +  S +A +PG   L  TI  L  A
Sbjct: 275 G-----DAFSMNHIDVSCCTKSGCNHPDLDVQYRSGAAPQPGPAHLSLTITLLMTA 325


>gi|34996523 LY6/PLAUR domain containing 6 [Homo sapiens]
          Length = 171

 Score = 37.0 bits (84), Expect = 0.005
 Identities = 27/106 (25%), Positives = 42/106 (39%), Gaps = 5/106 (4%)

Query: 24  QCYQCEEFQLNNDCSSPEFIVNCTVNVQDMCQKEVMEQSAG-IMYRKSCASSAACLIASA 82
           +C+ CE+   N +C+     + C    +    +  ME +   I   K C     CL  S 
Sbjct: 48  KCFTCEKAADNYECNRWAPDIYCPRETRYCYTQHTMEVTGNSISVTKRCVPLEECL--ST 105

Query: 83  GYQSFCSPGKLNSVCISCCNTPLCNGPRPKKRGSSASALRPGLRTT 128
           G +     G  + VC SCC   +CN P P+    +  A    +  T
Sbjct: 106 GCRDSEHEG--HKVCTSCCEGNICNLPLPRNETDATFATTSPINQT 149


>gi|13994360 keratin associated protein 1.5 [Homo sapiens]
          Length = 174

 Score = 33.9 bits (76), Expect = 0.046
 Identities = 21/72 (29%), Positives = 28/72 (38%), Gaps = 11/72 (15%)

Query: 37  CSSPEFIVNCTVNVQDMCQKEVMEQSAGIMYRKSCASSAACLIASAGYQSFCSPGKLNSV 96
           C  P F ++ T      CQ    E S        C    +C  +  G+ SF + G  +S 
Sbjct: 9   CGYPSFSISGTCG-SSCCQPSCCETS--------CCQPRSCQTSFCGFPSFSTSGTCSSS 59

Query: 97  CI--SCCNTPLC 106
           C   SCC T  C
Sbjct: 60  CCQPSCCETSCC 71


>gi|112420992 crumbs homolog 2 [Homo sapiens]
          Length = 1285

 Score = 33.5 bits (75), Expect = 0.060
 Identities = 23/94 (24%), Positives = 39/94 (41%), Gaps = 11/94 (11%)

Query: 54  CQKEVMEQSAGIMYRKSCASSAACLIASAGYQSFCSPGKLNSVC----ISCCNTPLCNGP 109
           C++EV+E ++       C  +A+CL     ++  C PG    +C      C ++P  +G 
Sbjct: 220 CEREVLECASA-----PCEHNASCLEGLGSFRCLCWPGYSGELCEVDEDECASSPCQHGG 274

Query: 110 RPKKRGSSA--SALRPGLRTTILFLKLALFSAHC 141
           R  +R   A    ++        F   A F  HC
Sbjct: 275 RCLQRSDPALYGGVQAAFPGAFSFRHAAGFLCHC 308


>gi|239756699 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 302

 Score = 32.3 bits (72), Expect = 0.13
 Identities = 22/64 (34%), Positives = 30/64 (46%), Gaps = 1/64 (1%)

Query: 66  MYRKSCASSAACLIASAGYQSFCSPGKLNSVCISCCNTPLCNGPRPKKRGSSASALRPGL 125
           ++  S  SS AC  +  G  +  + G+L  +C SC + P      P   GSS   LRP L
Sbjct: 92  VHTSSSFSSWACSSSMPGGNTRRA-GRLQPLCASCSHRPFDTPKDPGAPGSSTPILRPLL 150

Query: 126 RTTI 129
            T I
Sbjct: 151 HTRI 154


>gi|239745682 PREDICTED: hypothetical protein XP_002343543 [Homo
           sapiens]
          Length = 302

 Score = 32.3 bits (72), Expect = 0.13
 Identities = 22/64 (34%), Positives = 30/64 (46%), Gaps = 1/64 (1%)

Query: 66  MYRKSCASSAACLIASAGYQSFCSPGKLNSVCISCCNTPLCNGPRPKKRGSSASALRPGL 125
           ++  S  SS AC  +  G  +  + G+L  +C SC + P      P   GSS   LRP L
Sbjct: 93  VHTSSSFSSWACSSSMPGGNTRRA-GRLQPLCASCSHRPFDTPKDPGAPGSSTPILRPLL 151

Query: 126 RTTI 129
            T I
Sbjct: 152 HTRI 155


>gi|55770876 notch4 preproprotein [Homo sapiens]
          Length = 2003

 Score = 32.3 bits (72), Expect = 0.13
 Identities = 24/93 (25%), Positives = 36/93 (38%), Gaps = 11/93 (11%)

Query: 38  SSPEFIVNCTVNVQ-DMCQKEVMEQSAGIMYRKSCASSAACLIASAGYQSFCSPGKLNSV 96
           S P +  +C    Q  +CQ  V    +     + C + A C+   +GY   C+PG     
Sbjct: 910 SGPSYFCHCPPGFQGSLCQDHVNPCES-----RPCQNGATCMAQPSGYLCQCAPGYDGQN 964

Query: 97  C---ISCCNTPLC--NGPRPKKRGSSASALRPG 124
           C   +  C +  C  +G    K G    A  PG
Sbjct: 965 CSKELDACQSQPCHNHGTCTPKPGGFHCACPPG 997



 Score = 29.6 bits (65), Expect = 0.86
 Identities = 21/71 (29%), Positives = 29/71 (40%), Gaps = 5/71 (7%)

Query: 54  CQKEVMEQSAGIMYRKSCASSAACLIASAGYQSFCSPGKLNSVCISCCNTPLCNGPRPKK 113
           CQK  + Q  GI     C +   C+ +   Y   C PG   S+C    N   C   RP +
Sbjct: 886 CQKAALSQ--GIDVSSLCHNGGLCVDSGPSYFCHCPPGFQGSLCQDHVNP--CES-RPCQ 940

Query: 114 RGSSASALRPG 124
            G++  A   G
Sbjct: 941 NGATCMAQPSG 951


>gi|4504033 glycosylphosphatidylinositol anchored molecule like
           protein [Homo sapiens]
          Length = 158

 Score = 32.3 bits (72), Expect = 0.13
 Identities = 21/89 (23%), Positives = 40/89 (44%), Gaps = 7/89 (7%)

Query: 27  QCEEFQLNNDCSSPEFIVNCTVNVQDMCQKEVMEQSAGIMYRKSCASSAACLIASAGYQS 86
           +C +  + ND + P   V C  +++      +   S  ++  K+C ++  C    A  Q 
Sbjct: 30  RCHDCAVINDFNCPNIRV-CPYHIRRCMTISIRINSRELLVYKNCTNN--CTFVYAAEQP 86

Query: 87  FCSPGKL----NSVCISCCNTPLCNGPRP 111
             +PGK+    +   + CCN+ +CN   P
Sbjct: 87  PEAPGKIFKTNSFYWVCCCNSMVCNAGGP 115


>gi|13569940 keratin associated protein 1-3 [Homo sapiens]
          Length = 167

 Score = 32.0 bits (71), Expect = 0.17
 Identities = 14/39 (35%), Positives = 19/39 (48%), Gaps = 2/39 (5%)

Query: 70  SCASSAACLIASAGYQSFCSPGKLNSVCI--SCCNTPLC 106
           SC   + C  +  G+ SF + G  +S C   SCC T  C
Sbjct: 33  SCCQPSCCQTSFCGFPSFSTSGTCSSSCCQPSCCETSCC 71


>gi|28626521 zinc finger, NFX1-type containing 1 [Homo sapiens]
          Length = 1918

 Score = 32.0 bits (71), Expect = 0.17
 Identities = 24/112 (21%), Positives = 41/112 (36%), Gaps = 10/112 (8%)

Query: 9    TFCGLFLLPGFALQIQCYQCEEFQLNNDCSSP-EFIVNCTVNVQD-------MCQKEVME 60
            T CG  L  G      C+ C E + +  C  P + ++ C+   Q+        CQ+    
Sbjct: 1433 TKCGTILDCGHPCPGSCHSCFEGRFHERCQQPCKRLLICSHKCQEPCIGECPPCQRTCQN 1492

Query: 61   QSAGIMYRKSCASSAACLIASAGYQSFCSPGKLNSVCISCCNTPLCNGPRPK 112
            +      +K C    +  +    ++  C   +   +C   CN P C  P  K
Sbjct: 1493 RCVHSQCKKKCGELCSPCVEPCVWR--CQHYQCTKLCSEPCNRPPCYVPCTK 1542


>gi|9506545 delta-like 4 protein precursor [Homo sapiens]
          Length = 685

 Score = 31.6 bits (70), Expect = 0.23
 Identities = 15/53 (28%), Positives = 23/53 (43%), Gaps = 4/53 (7%)

Query: 71  CASSAACLIASAGYQSFCSPGKLNSVC----ISCCNTPLCNGPRPKKRGSSAS 119
           C +  +C     GY   C PG     C    +SC ++P  NG   ++R   A+
Sbjct: 333 CRNGGSCKDQEDGYHCLCPPGYYGLHCEHSTLSCADSPCFNGGSCRERNQGAN 385


>gi|41327708 crumbs homolog 1 precursor [Homo sapiens]
          Length = 1406

 Score = 31.6 bits (70), Expect = 0.23
 Identities = 24/88 (27%), Positives = 36/88 (40%), Gaps = 22/88 (25%)

Query: 28  CEEFQLNNDCSSPEFIVNCTV---NVQDMCQKEVMEQSAGIMYRKSCASSAACLIASAGY 84
           C++F  +NDCS  +   N      N++D C            +   C  SA C + + G 
Sbjct: 45  CKDFSKDNDCSCSDTANNLDKDCDNMKDPC------------FSNPCQGSATC-VNTPGE 91

Query: 85  QSF---CSPGKLNSVC---ISCCNTPLC 106
           +SF   C PG   ++C   I  C    C
Sbjct: 92  RSFLCKCPPGYSGTICETTIGSCGKNSC 119


>gi|40255210 LY6/PLAUR domain containing 6B [Homo sapiens]
          Length = 207

 Score = 31.6 bits (70), Expect = 0.23
 Identities = 25/111 (22%), Positives = 39/111 (35%), Gaps = 5/111 (4%)

Query: 19  FALQIQCYQCEEFQLNNDCSSPEFIVNCTVNVQD-MCQKEVMEQSAGIMYRKSCASSAAC 77
           F    +C+ CE    N +C+       C  N Q  +               K CAS + C
Sbjct: 80  FPNSFKCFTCENAGDNYNCNRWAEDKWCPQNTQYCLTVHHFTSHGRSTSITKKCASRSEC 139

Query: 78  LIASAGYQSFCSPGKLNSVCISCCNTPLCNGPRPKKRGSSASALRPGLRTT 128
                 +    S    ++ C SCC   +CN   P    ++  A+    RT+
Sbjct: 140 HFVGCHH----SRDSEHTECRSCCEGMICNVELPTNHTNAVFAVMHAQRTS 186


>gi|13569942 keratin associated protein 1-1 [Homo sapiens]
          Length = 177

 Score = 31.6 bits (70), Expect = 0.23
 Identities = 14/39 (35%), Positives = 19/39 (48%), Gaps = 2/39 (5%)

Query: 70  SCASSAACLIASAGYQSFCSPGKLNSVCI--SCCNTPLC 106
           SC   + C  +  G+ SF + G  +S C   SCC T  C
Sbjct: 43  SCCQPSCCQTSFCGFPSFSTGGTCDSSCCQPSCCETSCC 81


>gi|148833508 notch1 preproprotein [Homo sapiens]
          Length = 2555

 Score = 30.4 bits (67), Expect = 0.50
 Identities = 23/82 (28%), Positives = 30/82 (36%), Gaps = 7/82 (8%)

Query: 28   CEEFQLNNDCSSPEFI--VNCTVNVQDMCQKEVMEQSAGIMYRKSCASSAACLIASAGYQ 85
            C +      CS P     V+C +NV D C   V   S        C ++  C+    GY 
Sbjct: 1198 CLDLPNTYKCSCPRGTQGVHCEINVDD-CNPPVDPVSRS----PKCFNNGTCVDQVGGYS 1252

Query: 86   SFCSPGKLNSVCISCCNTPLCN 107
              C PG +   C    N  L N
Sbjct: 1253 CTCPPGFVGERCEGDVNECLSN 1274



 Score = 29.6 bits (65), Expect = 0.86
 Identities = 19/68 (27%), Positives = 23/68 (33%), Gaps = 18/68 (26%)

Query: 45  NCTVNVQDMCQKEVMEQSAGIMYRKSCASSAACLIASAGYQSFCSPGKLNSVC----ISC 100
           NC +N+ D                 S   S  CL    GY+  C PG   S+C      C
Sbjct: 637 NCEINLDDCAS--------------SPCDSGTCLDKIDGYECACEPGYTGSMCNINIDEC 682

Query: 101 CNTPLCNG 108
              P  NG
Sbjct: 683 AGNPCHNG 690


>gi|134244285 Notch homolog 3 [Homo sapiens]
          Length = 2321

 Score = 30.0 bits (66), Expect = 0.66
 Identities = 17/76 (22%), Positives = 29/76 (38%), Gaps = 9/76 (11%)

Query: 53  MCQKEVMEQSAGIMYRKSCASSAACLIASAGYQSFCSPGKLNSVCI----SCCNTPLCNG 108
           +C  E+ E ++       C    +C+    G++  C PG L  +C+     C + P  +G
Sbjct: 653 LCNVEINECASS-----PCGEGGSCVDGENGFRCLCPPGSLPPLCLPPSHPCAHEPCSHG 707

Query: 109 PRPKKRGSSASALRPG 124
                 G       PG
Sbjct: 708 ICYDAPGGFRCVCEPG 723



 Score = 30.0 bits (66), Expect = 0.66
 Identities = 34/138 (24%), Positives = 51/138 (36%), Gaps = 27/138 (19%)

Query: 5   GIAATFCGLFLLPGFALQIQCYQCEEFQLNNDCSSPEFIVNCTVNVQDM----------- 53
           G+ +  C    LPGFA   +C +  +  L+N C        CT +V              
Sbjct: 867 GVGSFSCSC--LPGFAGP-RCARDVDECLSNPCGPG----TCTDHVASFTCTCPPGYGGF 919

Query: 54  -CQKEVMEQSAGIMYRKSCASSAACLIASAGYQSFCSPGKLNSVCISCCNTPLCNGPRPK 112
            C++++ + S       SC +   C+     +   C PG   + C    +  L    RP 
Sbjct: 920 HCEQDLPDCSPS-----SCFNGGTCVDGVNSFSCLCRPGYTGAHCQHEADPCLS---RPC 971

Query: 113 KRGSSASALRPGLRTTIL 130
             G   SA  PG R T L
Sbjct: 972 LHGGVCSAAHPGFRCTCL 989



 Score = 26.9 bits (58), Expect = 5.6
 Identities = 24/82 (29%), Positives = 34/82 (41%), Gaps = 11/82 (13%)

Query: 52   DMCQKEVMEQSAGIMYRKSCASSAACLIASAGYQSFCSPGKLNSVC----ISC-CNTPLC 106
            D C+ +V E ++     + C    +C+   A Y   C PG L  +C      C    PL 
Sbjct: 1117 DNCEDDVDECAS-----QPCQHGGSCIDLVARYLCSCPPGTLGVLCEINEDDCGPGPPLD 1171

Query: 107  NGPRPKKRGSSASALRPGLRTT 128
            +GPR    G+    L  G R T
Sbjct: 1172 SGPRCLHNGTCVD-LVGGFRCT 1192


>gi|38490568 keratin associated protein 10-4 [Homo sapiens]
          Length = 401

 Score = 30.0 bits (66), Expect = 0.66
 Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 3/39 (7%)

Query: 70  SCASSAACL--IASAGYQSFCSPGKLNSVCISCCNTPLC 106
           SC   ++C+  ++S   Q+ C P    S CIS C TP C
Sbjct: 171 SCCQQSSCVSCVSSPCCQAVCEPSPCQSGCISSC-TPSC 208


>gi|154759251 keratin associated protein 10-9 [Homo sapiens]
          Length = 292

 Score = 30.0 bits (66), Expect = 0.66
 Identities = 18/56 (32%), Positives = 23/56 (41%), Gaps = 3/56 (5%)

Query: 54  CQKEVMEQSAGIMYRKSCASSAACLIASAGYQSFCSPGKLNSVCIS-CCNTPLCNG 108
           C     E S     + SC    AC  +S   QS+C P     VC    C  P+C+G
Sbjct: 151 CAPTCSEDSYSCCQQSSC--QPACCTSSPCQQSYCVPVCCKPVCCKPICCVPVCSG 204


>gi|38490571 keratin associated protein 10-7 [Homo sapiens]
          Length = 370

 Score = 30.0 bits (66), Expect = 0.66
 Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 3/39 (7%)

Query: 70  SCASSAACL--IASAGYQSFCSPGKLNSVCISCCNTPLC 106
           SC   ++C+  ++S   Q+ C P    S CIS C TP C
Sbjct: 171 SCCQQSSCVSCVSSPCCQAVCEPSPCQSGCISSC-TPSC 208


>gi|45593147 EGF-like-domain, multiple 9 [Homo sapiens]
          Length = 383

 Score = 29.6 bits (65), Expect = 0.86
 Identities = 27/106 (25%), Positives = 33/106 (31%), Gaps = 19/106 (17%)

Query: 24  QCYQCEEFQLNNDCSSPEFIVN--CTVNVQDMCQKEVMEQSAGIMYRKSCASSAACLIAS 81
           QC   + F LN  C      V   C VNV D   +              CA+ A CL   
Sbjct: 147 QCQDDQGFALNFTCRCLVGFVGARCEVNVDDCLMRP-------------CANGATCLDGI 193

Query: 82  AGYQSFCSPGKLNSVCI----SCCNTPLCNGPRPKKRGSSASALRP 123
             +   C  G     C      C + P   G R + R      L P
Sbjct: 194 NRFSCLCPEGFAGRFCTINLDDCASRPCQRGARCRDRVHDFDCLCP 239


>gi|45545431 EGF-like-domain, multiple 9 [Homo sapiens]
          Length = 383

 Score = 29.6 bits (65), Expect = 0.86
 Identities = 27/106 (25%), Positives = 33/106 (31%), Gaps = 19/106 (17%)

Query: 24  QCYQCEEFQLNNDCSSPEFIVN--CTVNVQDMCQKEVMEQSAGIMYRKSCASSAACLIAS 81
           QC   + F LN  C      V   C VNV D   +              CA+ A CL   
Sbjct: 147 QCQDDQGFALNFTCRCLVGFVGARCEVNVDDCLMRP-------------CANGATCLDGI 193

Query: 82  AGYQSFCSPGKLNSVCI----SCCNTPLCNGPRPKKRGSSASALRP 123
             +   C  G     C      C + P   G R + R      L P
Sbjct: 194 NRFSCLCPEGFAGRFCTINLDDCASRPCQRGARCRDRVHDFDCLCP 239


>gi|4557679 jagged 1 precursor [Homo sapiens]
          Length = 1218

 Score = 29.3 bits (64), Expect = 1.1
 Identities = 19/77 (24%), Positives = 26/77 (33%), Gaps = 18/77 (23%)

Query: 36  DCSSPEFIVNCTVNVQDMCQKEVMEQSAGIMYRKSCASSAACLIASAGYQSFCSPGKLNS 95
           DC       NC +N+ D   +              C + A+C     GY+  C PG    
Sbjct: 437 DCLPGWMGQNCDININDCLGQ--------------CQNDASCRDLVNGYRCICPPGYAGD 482

Query: 96  VC----ISCCNTPLCNG 108
            C      C + P  NG
Sbjct: 483 HCERDIDECASNPCLNG 499



 Score = 26.6 bits (57), Expect = 7.3
 Identities = 15/60 (25%), Positives = 22/60 (36%), Gaps = 13/60 (21%)

Query: 45  NCTVNVQDMCQKEVMEQSAGIMYRKSCASSAACLIASAGYQSFCSPGKLNSVCISCCNTP 104
           +C +N+ + CQ               CA  A C+    GY+  C PG   + C      P
Sbjct: 816 DCRININE-CQSS------------PCAFGATCVDEINGYRCVCPPGHSGAKCQEVSGRP 862


>gi|10864065 neuroglobin [Homo sapiens]
          Length = 151

 Score = 29.3 bits (64), Expect = 1.1
 Identities = 22/70 (31%), Positives = 29/70 (41%), Gaps = 11/70 (15%)

Query: 10 FCGLFLLPGFALQIQCYQCEEFQLNNDC-SSPEFIVN----------CTVNVQDMCQKEV 58
          F  LF L    L +  Y C +F    DC SSPEF+ +             NV+D+   E 
Sbjct: 28 FARLFALEPDLLPLFQYNCRQFSSPEDCLSSPEFLDHIRKVMLVIDAAVTNVEDLSSLEE 87

Query: 59 MEQSAGIMYR 68
             S G  +R
Sbjct: 88 YLASLGRKHR 97


>gi|111074524 Src homology 2 domain containing F [Homo sapiens]
          Length = 423

 Score = 29.3 bits (64), Expect = 1.1
 Identities = 22/75 (29%), Positives = 33/75 (44%), Gaps = 6/75 (8%)

Query: 54  CQKEVMEQSA-GIMYRKSCASSAACLIASAGYQSFCSPGKLNSVC-----ISCCNTPLCN 107
           C+   +E S  G    +  AS    L ++  +    +P  LNS C     IS    P+ N
Sbjct: 13  CRTGTLEGSRQGSPGHRKRASPKGSLSSAQPHSWMLTPSPLNSHCAHREPISSSPQPVAN 72

Query: 108 GPRPKKRGSSASALR 122
           GP+ KK+ +  S  R
Sbjct: 73  GPKQKKKSNWRSTTR 87


>gi|62243658 PI-3-kinase-related kinase SMG-1 [Homo sapiens]
          Length = 3661

 Score = 28.5 bits (62), Expect = 1.9
 Identities = 21/69 (30%), Positives = 29/69 (42%), Gaps = 11/69 (15%)

Query: 35   NDCSSP--------EFIVNCTVNVQDMCQKEVMEQSAGIMYRKSCASSA---ACLIASAG 83
            N+CSSP         F      N     Q +VM Q+A  + +K+ A+SA      +   G
Sbjct: 3523 NECSSPTSSATYQPSFAAAVRSNTGQKTQPDVMSQNARKLIQKNLATSADTPPSTVPGTG 3582

Query: 84   YQSFCSPGK 92
                CSP K
Sbjct: 3583 KSVACSPKK 3591


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.326    0.136    0.444 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,903,437
Number of Sequences: 37866
Number of extensions: 252674
Number of successful extensions: 1040
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 61
Number of HSP's that attempted gapping in prelim test: 949
Number of HSP's gapped (non-prelim): 149
length of query: 141
length of database: 18,247,518
effective HSP length: 92
effective length of query: 49
effective length of database: 14,763,846
effective search space: 723428454
effective search space used: 723428454
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 56 (26.2 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.