SMG1 34154

Name: SMG1	Sequence: fasta or formatted (3661aa)		NCBI GI: 62243658
Description: PI-3-kinase-related kinase SMG-1		Referenced in: RNases and RNA Stability Additional Serine / Threonine Protein Kinases
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.3 266 3 C cysteine 2.0 72 2 D aspartate 4.4 160 3 E glutamate 7.2 265 3 F phenylalanine 3.0 110 2 G glycine 4.7 171 6 H histidine 2.4 87 2 I isoleucine 5.1 186 2 K lysine 5.3 195 3 L leucine 12.1 444 3 M methionine 2.2 79 2 N asparagine 3.9 144 3 P proline 3.9 142 3 Q glutamine 6.1 224 2 R arginine 4.9 181 2 S serine 8.6 314 4 T threonine 6.2 228 3 V valine 6.8 250 2 W tryptophan 1.5 56 2 Y tyrosine 2.4 87 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PI-3-kinase-related kinase SMG-1 LOC100288704 0.133 PREDICTED: hypothetical protein XP_002343506 MTOR 0.028 FK506 binding protein 12-rapamycin associated protein... ATR 0.022 ataxia telangiectasia and Rad3 related protein [Hom... LOC648152 0.022 PREDICTED: similar to ataxia telangiectasia and Rad... ATM 0.021 ataxia telangiectasia mutated isoform 2 ATM 0.021 ataxia telangiectasia mutated isoform 1 LOC651610 0.021 PREDICTED: similar to Serine-protein kinase ATM, pa... PRKDC 0.013 protein kinase, DNA-activated, catalytic polypeptide... PRKDC 0.010 protein kinase, DNA-activated, catalytic polypeptid... LOC731751 0.010 PREDICTED: similar to protein kinase, DNA-activated... TRRAP 0.005 transformation/transcription domain-associated protei... PIK3CB 0.005 catalytic phosphatidylinositol 3-kinase beta PIK3C3 0.004 catalytic phosphatidylinositol 3-kinase 3 MYH3 0.003 myosin, heavy chain 3, skeletal muscle, embryonic [H... PIK3CG 0.003 phosphoinositide-3-kinase, catalytic, gamma polypept... MYH6 0.003 myosin heavy chain 6 LOC651921 0.002 PREDICTED: similar to ataxia telangiectasia and Rad... PIK3CD 0.002 catalytic phosphatidylinositol 3-kinase delta [Homo... AKAP9 0.002 A-kinase anchor protein 9 isoform 2 CCDC88A 0.002 coiled-coil domain containing 88A isoform 2 MYH7 0.002 myosin, heavy chain 7, cardiac muscle, beta AKAP9 0.002 A-kinase anchor protein 9 isoform 3 TPR 0.002 nuclear pore complex-associated protein TPR PIK3C2A 0.002 phosphoinositide-3-kinase, class 2 alpha polypeptid... BICD1 0.002 bicaudal D homolog 1 isoform 2 BICD1 0.002 bicaudal D homolog 1 isoform 1 CCDC152 0.002 coiled-coil domain containing 152 PIK3C2B 0.002 phosphoinositide-3-kinase, class 2 beta polypeptide... GOLGA3 0.002 Golgi autoantigen, golgin subfamily a, 3 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.