Guide to the Human Genome
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Name: GML Sequence: fasta or formatted (158aa) NCBI GI: 4504033
Description:

glycosylphosphatidylinositol anchored molecule like protein

Referenced in:

Additional Genes in Development

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.6         12           2
 C cysteine            7.0         11           3
 D aspartate           2.5          4           1
 E glutamate           6.3         10           3
 F phenylalanine       3.8          6           1
 G glycine             3.2          5           2
 H histidine           1.3          2           1
 I isoleucine          6.3         10           2
 K lysine              2.5          4           1
 L leucine            11.4         18           3
 M methionine          3.8          6           1
 N asparagine          7.6         12           2
 P proline             6.3         10           2
 Q glutamine           1.3          2           1
 R arginine            5.7          9           2
 S serine              6.3         10           1
 T threonine           5.7          9           1
 V valine              7.0         11           1
 W tryptophan          1.3          2           1
 Y tyrosine            3.2          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   glycosylphosphatidylinositol anchored molecule like p... 
LY6K                  0.098   lymphocyte antigen 6 complex, locus K isoform 1 [Ho...
LY6D                  0.049   lymphocyte antigen 6 complex, locus D 
LYNX1                 0.046   Ly-6 neurotoxin-like protein 1 isoform c 
LYNX1                 0.046   Ly-6 neurotoxin-like protein 1 isoform c 
LYNX1                 0.046   Ly-6 neurotoxin-like protein 1 isoform c 
PSCA                  0.029   prostate stem cell antigen preproprotein 
LYPD6B                0.029   LY6/PLAUR domain containing 6B 
LYNX1                 0.026   Ly-6 neurotoxin-like protein 1 isoform a 
LYPD1                 0.023   LY6/PLAUR domain containing 1 isoform a 
LY6K                  0.020   lymphocyte antigen 6 complex, locus K isoform 3 [Ho...
LY6K                  0.016   lymphocyte antigen 6 complex, locus K isoform 2 [Ho...
DNAH14                0.013   dynein, axonemal, heavy polypeptide 14 isoform 1 [H...
KIAA1797              0.013   hypothetical protein LOC54914 
LYPD2                 0.013   LY6/PLAUR domain containing 2 
LY6G6C                0.010   lymphocyte antigen 6 complex G6C 
PLAUR                 0.007   plasminogen activator, urokinase receptor isoform 2 ...
PLAUR                 0.007   plasminogen activator, urokinase receptor isoform 1 p...
TGFBR1                0.007   transforming growth factor, beta receptor I isoform...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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